Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12e08
         (684 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-1662|AAF52791.1|  564|Drosophila melanogaster CG3841-PA...    31   1.9  
AY058302-1|AAL13531.1|  493|Drosophila melanogaster GH06357p pro...    29   7.8  
AE014298-1575|AAN09291.1|  398|Drosophila melanogaster CG1938-PB...    29   7.8  
AE014298-1573|AAN09289.1|  493|Drosophila melanogaster CG1938-PD...    29   7.8  
AE014298-1572|AAN09288.1|  493|Drosophila melanogaster CG1938-PC...    29   7.8  
AE014298-1571|AAF48011.2|  493|Drosophila melanogaster CG1938-PA...    29   7.8  

>AE014134-1662|AAF52791.1|  564|Drosophila melanogaster CG3841-PA
           protein.
          Length = 564

 Score = 30.7 bits (66), Expect = 1.9
 Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
 Frame = -2

Query: 575 RFTNSLPLTHWPRPSLSRKHSSLSLPQRSINSSPTSHCCLIPHMSKS---SLPTVSVFMD 405
           RF N +P T W     +    SL  PQ  + S  +  C  I   +KS     P V V++ 
Sbjct: 68  RFANPVPETSWGDEVFNATSDSLVCPQPGVVSLMSEDCLKINVFTKSFEDKFP-VMVYIH 126

Query: 404 SSTRVLGS 381
               VLGS
Sbjct: 127 GGANVLGS 134


>AY058302-1|AAL13531.1|  493|Drosophila melanogaster GH06357p
           protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +1

Query: 349 YQAYAYNGGSLDPNTRVEESMKTLTVGKEDLL 444
           +Q+Y   G  LDP + V+ +M+  ++ ++DLL
Sbjct: 176 WQSYCEVGDDLDPGSPVKRTMRNNSIDEDDLL 207


>AE014298-1575|AAN09291.1|  398|Drosophila melanogaster CG1938-PB,
           isoform B protein.
          Length = 398

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +1

Query: 349 YQAYAYNGGSLDPNTRVEESMKTLTVGKEDLL 444
           +Q+Y   G  LDP + V+ +M+  ++ ++DLL
Sbjct: 81  WQSYCEVGDDLDPGSPVKRTMRNNSIDEDDLL 112


>AE014298-1573|AAN09289.1|  493|Drosophila melanogaster CG1938-PD,
           isoform D protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +1

Query: 349 YQAYAYNGGSLDPNTRVEESMKTLTVGKEDLL 444
           +Q+Y   G  LDP + V+ +M+  ++ ++DLL
Sbjct: 176 WQSYCEVGDDLDPGSPVKRTMRNNSIDEDDLL 207


>AE014298-1572|AAN09288.1|  493|Drosophila melanogaster CG1938-PC,
           isoform C protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +1

Query: 349 YQAYAYNGGSLDPNTRVEESMKTLTVGKEDLL 444
           +Q+Y   G  LDP + V+ +M+  ++ ++DLL
Sbjct: 176 WQSYCEVGDDLDPGSPVKRTMRNNSIDEDDLL 207


>AE014298-1571|AAF48011.2|  493|Drosophila melanogaster CG1938-PA,
           isoform A protein.
          Length = 493

 Score = 28.7 bits (61), Expect = 7.8
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +1

Query: 349 YQAYAYNGGSLDPNTRVEESMKTLTVGKEDLL 444
           +Q+Y   G  LDP + V+ +M+  ++ ++DLL
Sbjct: 176 WQSYCEVGDDLDPGSPVKRTMRNNSIDEDDLL 207


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,191,936
Number of Sequences: 53049
Number of extensions: 636559
Number of successful extensions: 2355
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2355
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2992560750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)