Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12e06
(694 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC053373-1|AAH53373.1| 202|Homo sapiens mitochondrial ribosomal... 114 3e-25
BC052639-1|AAH52639.1| 164|Homo sapiens MRPL43 protein protein. 114 3e-25
BC041165-1|AAH41165.1| 215|Homo sapiens mitochondrial ribosomal... 114 3e-25
BC015905-1|AAH15905.1| 159|Homo sapiens mitochondrial ribosomal... 114 3e-25
AL133215-9|CAI10923.1| 159|Homo sapiens mitochondrial ribosomal... 114 3e-25
AL133215-8|CAI10922.1| 164|Homo sapiens mitochondrial ribosomal... 114 3e-25
AL133215-7|CAI10921.1| 168|Homo sapiens mitochondrial ribosomal... 114 3e-25
AL133215-6|CAI10920.1| 202|Homo sapiens mitochondrial ribosomal... 114 3e-25
AL133215-5|CAI10919.1| 215|Homo sapiens mitochondrial ribosomal... 114 3e-25
AL133215-4|CAI10918.1| 261|Homo sapiens mitochondrial ribosomal... 114 3e-25
AL133215-3|CAI10917.1| 184|Homo sapiens mitochondrial ribosomal... 114 3e-25
AK095556-1|BAC04572.1| 215|Homo sapiens protein ( Homo sapiens ... 114 3e-25
AB049656-1|BAB40861.1| 197|Homo sapiens mitochondrial ribosomal... 112 1e-24
BC031287-1|AAH31287.1| 145|Homo sapiens MRPL43 protein protein. 81 4e-15
CR457016-1|CAG33297.1| 99|Homo sapiens CD14 protein. 41 0.005
BC003674-1|AAH03674.1| 99|Homo sapiens NADH dehydrogenase (ubi... 41 0.005
AF047185-1|AAC04270.1| 99|Homo sapiens NADH-ubiquinone oxidore... 41 0.005
AB054976-1|BAB21453.1| 99|Homo sapiens NADH dehydrogenase (ubi... 41 0.005
>BC053373-1|AAH53373.1| 202|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 202
Score = 114 bits (274), Expect = 3e-25
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +1
Query: 94 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 273
S F+ + L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+
Sbjct: 8 SRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNS 67
Query: 274 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 453
R P +V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+
Sbjct: 68 RPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSI 126
Query: 454 QGPWTPFTFK 483
QG W PFT K
Sbjct: 127 QGQWHPFTNK 136
>BC052639-1|AAH52639.1| 164|Homo sapiens MRPL43 protein protein.
Length = 164
Score = 114 bits (274), Expect = 3e-25
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +1
Query: 94 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 273
S F+ + L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+
Sbjct: 8 SRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNS 67
Query: 274 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 453
R P +V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+
Sbjct: 68 RPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSI 126
Query: 454 QGPWTPFTFK 483
QG W PFT K
Sbjct: 127 QGQWHPFTNK 136
>BC041165-1|AAH41165.1| 215|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 215
Score = 114 bits (274), Expect = 3e-25
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +1
Query: 94 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 273
S F+ + L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+
Sbjct: 8 SRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNS 67
Query: 274 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 453
R P +V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+
Sbjct: 68 RPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSI 126
Query: 454 QGPWTPFTFK 483
QG W PFT K
Sbjct: 127 QGQWHPFTNK 136
>BC015905-1|AAH15905.1| 159|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 159
Score = 114 bits (274), Expect = 3e-25
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +1
Query: 94 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 273
S F+ + L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+
Sbjct: 8 SRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNS 67
Query: 274 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 453
R P +V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+
Sbjct: 68 RPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSI 126
Query: 454 QGPWTPFTFK 483
QG W PFT K
Sbjct: 127 QGQWHPFTNK 136
>AL133215-9|CAI10923.1| 159|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 159
Score = 114 bits (274), Expect = 3e-25
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +1
Query: 94 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 273
S F+ + L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+
Sbjct: 8 SRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNS 67
Query: 274 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 453
R P +V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+
Sbjct: 68 RPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSI 126
Query: 454 QGPWTPFTFK 483
QG W PFT K
Sbjct: 127 QGQWHPFTNK 136
>AL133215-8|CAI10922.1| 164|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 164
Score = 114 bits (274), Expect = 3e-25
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +1
Query: 94 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 273
S F+ + L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+
Sbjct: 8 SRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNS 67
Query: 274 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 453
R P +V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+
Sbjct: 68 RPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSI 126
Query: 454 QGPWTPFTFK 483
QG W PFT K
Sbjct: 127 QGQWHPFTNK 136
>AL133215-7|CAI10921.1| 168|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 168
Score = 114 bits (274), Expect = 3e-25
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +1
Query: 94 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 273
S F+ + L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+
Sbjct: 4 SRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNS 63
Query: 274 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 453
R P +V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+
Sbjct: 64 RPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSI 122
Query: 454 QGPWTPFTFK 483
QG W PFT K
Sbjct: 123 QGQWHPFTNK 132
>AL133215-6|CAI10920.1| 202|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 202
Score = 114 bits (274), Expect = 3e-25
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +1
Query: 94 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 273
S F+ + L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+
Sbjct: 8 SRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNS 67
Query: 274 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 453
R P +V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+
Sbjct: 68 RPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSI 126
Query: 454 QGPWTPFTFK 483
QG W PFT K
Sbjct: 127 QGQWHPFTNK 136
>AL133215-5|CAI10919.1| 215|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 215
Score = 114 bits (274), Expect = 3e-25
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +1
Query: 94 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 273
S F+ + L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+
Sbjct: 8 SRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNS 67
Query: 274 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 453
R P +V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+
Sbjct: 68 RPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSI 126
Query: 454 QGPWTPFTFK 483
QG W PFT K
Sbjct: 127 QGQWHPFTNK 136
>AL133215-4|CAI10918.1| 261|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 261
Score = 114 bits (274), Expect = 3e-25
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +1
Query: 94 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 273
S F+ + L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+
Sbjct: 8 SRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNS 67
Query: 274 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 453
R P +V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+
Sbjct: 68 RPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSI 126
Query: 454 QGPWTPFTFK 483
QG W PFT K
Sbjct: 127 QGQWHPFTNK 136
>AL133215-3|CAI10917.1| 184|Homo sapiens mitochondrial ribosomal
protein L43 protein.
Length = 184
Score = 114 bits (274), Expect = 3e-25
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +1
Query: 94 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 273
S F+ + L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+
Sbjct: 8 SRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNS 67
Query: 274 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 453
R P +V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+
Sbjct: 68 RPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSI 126
Query: 454 QGPWTPFTFK 483
QG W PFT K
Sbjct: 127 QGQWHPFTNK 136
>AK095556-1|BAC04572.1| 215|Homo sapiens protein ( Homo sapiens
cDNA FLJ38237 fis, clone FCBBF2005637. ).
Length = 215
Score = 114 bits (274), Expect = 3e-25
Identities = 58/130 (44%), Positives = 84/130 (64%)
Frame = +1
Query: 94 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 273
S F+ + L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+
Sbjct: 8 SRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNS 67
Query: 274 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 453
R P +V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+
Sbjct: 68 RPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSI 126
Query: 454 QGPWTPFTFK 483
QG W PFT K
Sbjct: 127 QGQWHPFTNK 136
>AB049656-1|BAB40861.1| 197|Homo sapiens mitochondrial ribosomal
protein bMRP36a protein.
Length = 197
Score = 112 bits (270), Expect = 1e-24
Identities = 65/168 (38%), Positives = 96/168 (57%)
Frame = +1
Query: 94 SAFVRAPLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKP 273
S F+ + L NG+GRYV QLQR+ F + +SRG R+F+E++++DF++ NPGVV+Y+
Sbjct: 8 SRFLASVLHNGLGRYVQQLQRLSFSVSRDGASSRGAREFVEREVIDFARRNPGVVIYVNS 67
Query: 274 RRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVELFRTQQGNNWNSRLRKYQYTNHPSV 453
R P +V EYLNG S+H K+ EEI V+ Q G + R+RK +T++PS+
Sbjct: 68 RPCCVPRVVAEYLNGAVREESIHCKSVEEISTLVQKLADQSGLD-VIRIRKPFHTDNPSI 126
Query: 454 QGPWTPFTFKDPELNTAELPDVRFGSNNRLPATATEQLRLMFEKQKLD 597
QG WTP P +A RF + +E+L + Q LD
Sbjct: 127 QGQWTPSPTSRP--RSAGYAPERFRILPQPRCKHSEELPHQLQPQALD 172
>BC031287-1|AAH31287.1| 145|Homo sapiens MRPL43 protein protein.
Length = 145
Score = 81.0 bits (191), Expect = 4e-15
Identities = 40/95 (42%), Positives = 62/95 (65%)
Frame = +1
Query: 199 MRDFIEQDLVDFSKDNPGVVVYLKPRRHRGPVIVGEYLNGDRLWMSVHNKTHEEIVKWVE 378
+R+F+E++++DF++ NPGVV+Y+ R P +V EY+NG S+H K+ EEI V+
Sbjct: 29 LREFVEREVIDFARRNPGVVIYVNSRPCCVPRVVAEYINGAVREESIHCKSVEEISTLVQ 88
Query: 379 LFRTQQGNNWNSRLRKYQYTNHPSVQGPWTPFTFK 483
Q G + R+RK +T++PS+QG W PFT K
Sbjct: 89 KLADQSGLD-VIRIRKPFHTDNPSIQGQWHPFTNK 122
>CR457016-1|CAG33297.1| 99|Homo sapiens CD14 protein.
Length = 99
Score = 40.7 bits (91), Expect = 0.005
Identities = 23/90 (25%), Positives = 45/90 (50%)
Frame = +1
Query: 109 APLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRG 288
A GVG + L+ I C+ + S+G+RDFIE+ V+ K NP + + ++
Sbjct: 4 AAASRGVGAKL-GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQ 62
Query: 289 PVIVGEYLNGDRLWMSVHNKTHEEIVKWVE 378
P + Y G + ++N + +++ + +E
Sbjct: 63 PKLWARYAFGQETNVPLNNFSADQVTRALE 92
>BC003674-1|AAH03674.1| 99|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex, 2, 8kDa protein.
Length = 99
Score = 40.7 bits (91), Expect = 0.005
Identities = 23/90 (25%), Positives = 45/90 (50%)
Frame = +1
Query: 109 APLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRG 288
A GVG + L+ I C+ + S+G+RDFIE+ V+ K NP + + ++
Sbjct: 4 AAASRGVGAKL-GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQ 62
Query: 289 PVIVGEYLNGDRLWMSVHNKTHEEIVKWVE 378
P + Y G + ++N + +++ + +E
Sbjct: 63 PKLWARYAFGQETNVPLNNFSADQVTRALE 92
>AF047185-1|AAC04270.1| 99|Homo sapiens NADH-ubiquinone
oxidoreductase subunit CI-B8 protein.
Length = 99
Score = 40.7 bits (91), Expect = 0.005
Identities = 23/90 (25%), Positives = 45/90 (50%)
Frame = +1
Query: 109 APLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRG 288
A GVG + L+ I C+ + S+G+RDFIE+ V+ K NP + + ++
Sbjct: 4 AAASRGVGAKL-GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQ 62
Query: 289 PVIVGEYLNGDRLWMSVHNKTHEEIVKWVE 378
P + Y G + ++N + +++ + +E
Sbjct: 63 PKLWARYAFGQETNVPLNNFSADQVTRALE 92
>AB054976-1|BAB21453.1| 99|Homo sapiens NADH dehydrogenase
(ubiquinone) 1 alpha subcomplex 2 protein.
Length = 99
Score = 40.7 bits (91), Expect = 0.005
Identities = 23/90 (25%), Positives = 45/90 (50%)
Frame = +1
Query: 109 APLKNGVGRYVCQLQRIVFKFCKSNGASRGMRDFIEQDLVDFSKDNPGVVVYLKPRRHRG 288
A GVG + L+ I C+ + S+G+RDFIE+ V+ K NP + + ++
Sbjct: 4 AAASRGVGAKL-GLREIRIHLCQRSPGSQGVRDFIEKRYVELKKANPDLPILIRECSDVQ 62
Query: 289 PVIVGEYLNGDRLWMSVHNKTHEEIVKWVE 378
P + Y G + ++N + +++ + +E
Sbjct: 63 PKLWARYAFGQETNVPLNNFSADQVTRALE 92
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,427,574
Number of Sequences: 237096
Number of extensions: 2408386
Number of successful extensions: 9222
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 8992
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9208
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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