BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12e04
(645 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q08T88 Cluster: Putative uncharacterized protein; n=1; ... 44 0.004
UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep: CG... 37 0.36
UniRef50_Q9FL65 Cluster: Genomic DNA, chromosome 5, P1 clone:MDK... 29 1.1
UniRef50_Q1CX64 Cluster: Conserved domain protein; n=1; Myxococc... 36 1.1
UniRef50_UPI0000DB74BC Cluster: PREDICTED: similar to CG30084-PC... 35 1.9
UniRef50_Q22P03 Cluster: Putative uncharacterized protein; n=2; ... 35 1.9
UniRef50_Q4S162 Cluster: Chromosome 13 SCAF14769, whole genome s... 34 2.6
UniRef50_Q234X1 Cluster: Putative uncharacterized protein; n=1; ... 34 2.6
UniRef50_A2EIK8 Cluster: Putative uncharacterized protein; n=1; ... 34 3.4
UniRef50_A0CGU2 Cluster: Chromosome undetermined scaffold_18, wh... 34 3.4
UniRef50_Q8NFU7 Cluster: CXXC-type zinc finger protein 6; n=6; E... 33 4.5
UniRef50_Q1D218 Cluster: OmpA family protein; n=3; Cystobacterin... 33 5.9
UniRef50_A6GHW4 Cluster: Putative lipoprotein; n=1; Plesiocystis... 33 5.9
UniRef50_Q55EH9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.9
UniRef50_Q22WG6 Cluster: EGF-like domain containing protein; n=1... 33 5.9
UniRef50_Q22BS3 Cluster: Putative uncharacterized protein; n=2; ... 33 5.9
UniRef50_A0E8Q5 Cluster: Chromosome undetermined scaffold_83, wh... 33 5.9
UniRef50_A0E316 Cluster: Chromosome undetermined scaffold_76, wh... 33 5.9
UniRef50_Q234X7 Cluster: Putative uncharacterized protein; n=2; ... 33 7.8
UniRef50_A7S2W1 Cluster: Predicted protein; n=1; Nematostella ve... 33 7.8
UniRef50_A6R4S4 Cluster: Predicted protein; n=1; Ajellomyces cap... 33 7.8
>UniRef50_Q08T88 Cluster: Putative uncharacterized protein; n=1;
Stigmatella aurantiaca DW4/3-1|Rep: Putative
uncharacterized protein - Stigmatella aurantiaca DW4/3-1
Length = 676
Score = 43.6 bits (98), Expect = 0.004
Identities = 28/84 (33%), Positives = 37/84 (44%)
Frame = +1
Query: 241 VRCQEDTQCSSGYYCEIALNICRECINCEELKREPSTRFPPNTCIKSVVDCGTCKKGLVL 420
V C ED+QC +G C+ A N C+ C+N + P+ + N C D G C G V
Sbjct: 293 VECSEDSQCPNG-RCDPATNTCKGCLNNSDC---PTGQCTNNAC-TGCNDDGDCLSGQVC 347
Query: 421 DHDADISGECVRPDDREESAVLPP 492
D EC R +D V P
Sbjct: 348 DIPNFTCVECNRDEDCPPDEVCAP 371
>UniRef50_Q8IQ18 Cluster: CG33196-PB; n=10; Endopterygota|Rep:
CG33196-PB - Drosophila melanogaster (Fruit fly)
Length = 23015
Score = 37.1 bits (82), Expect = 0.36
Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +1
Query: 244 RCQEDTQCSSGYYCEIALNICRECIN-CEELKREPSTRFPPNTCIKSVVDC 393
+C+ D CS GY C+ ++N +ECIN C + P+ N ++ +C
Sbjct: 1622 KCKSDQDCSRGYGCQASVNGIKECINLCSNVVCGPNELCKINPAGHAICNC 1672
>UniRef50_Q9FL65 Cluster: Genomic DNA, chromosome 5, P1 clone:MDK4;
n=1; Arabidopsis thaliana|Rep: Genomic DNA, chromosome
5, P1 clone:MDK4 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 279
Score = 29.5 bits (63), Expect(2) = 1.1
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = -2
Query: 431 ASWSNTNPFLHVPQSTTDLIQVLGGKRVDGSRFNSSQLMHSRQIFN 294
+SWSNT+P + T L V V G+ NSS HS+ +F+
Sbjct: 136 SSWSNTDPSFYRKLFTPVLPCVPRNNFVAGNPGNSSASTHSKSLFS 181
Score = 25.0 bits (52), Expect(2) = 1.1
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -2
Query: 491 GGNTALSSRSSGLTHSPLISASWSNTNP 408
GG+++ + + LT P +SWSNTNP
Sbjct: 111 GGSSSTNDINLDLTLGP---SSWSNTNP 135
>UniRef50_Q1CX64 Cluster: Conserved domain protein; n=1; Myxococcus
xanthus DK 1622|Rep: Conserved domain protein -
Myxococcus xanthus (strain DK 1622)
Length = 719
Score = 35.5 bits (78), Expect = 1.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +1
Query: 241 VRCQEDTQCSSGYYCEIALNICREC 315
V C+ D+QC++G C +N CREC
Sbjct: 398 VECKNDSQCTNGEVCATDINECREC 422
>UniRef50_UPI0000DB74BC Cluster: PREDICTED: similar to CG30084-PC,
isoform C; n=1; Apis mellifera|Rep: PREDICTED: similar to
CG30084-PC, isoform C - Apis mellifera
Length = 1773
Score = 34.7 bits (76), Expect = 1.9
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Frame = +1
Query: 229 SPQPVRCQEDTQCSS--GYYCEIALNICRECINCEELKREPSTRFPPNTCIKSVVDCGTC 402
S + RCQ + QCS+ CE N C++ I+CE S PPN + S D GT
Sbjct: 1503 STETSRCQSNGQCSTTTSNQCETR-NYCQDGIHCEPSSNTQSLVDPPN--LSSHPDLGTG 1559
Query: 403 KKGL 414
GL
Sbjct: 1560 VGGL 1563
>UniRef50_Q22P03 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 3684
Score = 34.7 bits (76), Expect = 1.9
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +1
Query: 280 YCEIALNICRECINCEEL--KREPSTRFPPNTCIKSVVDCGTCKKGLVLDHDADISGE-C 450
YC+I LN C +C N + L KR TR P NT S C CK +L + D+S + C
Sbjct: 944 YCDINLNDCNQCENSKYLYNKRCLMTR-PDNTYCDSNKVCQVCKD--ILCQECDVSLQTC 1000
Query: 451 VRPDDRE 471
++ D++
Sbjct: 1001 LKCLDKK 1007
>UniRef50_Q4S162 Cluster: Chromosome 13 SCAF14769, whole genome
shotgun sequence; n=2; Tetraodon nigroviridis|Rep:
Chromosome 13 SCAF14769, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1873
Score = 34.3 bits (75), Expect = 2.6
Identities = 15/36 (41%), Positives = 18/36 (50%)
Frame = +1
Query: 265 CSSGYYCEIALNICRECINCEELKREPSTRFPPNTC 372
C GYY L+ CR C+ C L +PS PN C
Sbjct: 1068 CKLGYYGNATLSDCRRCV-CNALGSDPSACPAPNDC 1102
>UniRef50_Q234X1 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 975
Score = 34.3 bits (75), Expect = 2.6
Identities = 20/74 (27%), Positives = 34/74 (45%)
Frame = +1
Query: 241 VRCQEDTQCSSGYYCEIALNICRECINCEELKREPSTRFPPNTCIKSVVDCGTCKKGLVL 420
V C +D Q S YCE + +C+ C K T+ PN + S +C C++ +
Sbjct: 275 VACDQDRQFSQDQYCE---DCSPQCLKCSGTKNN-CTKCEPNLYLNSSNECVKCEE---I 327
Query: 421 DHDADISGECVRPD 462
+G+C++ D
Sbjct: 328 GQFKSKNGKCIQCD 341
>UniRef50_A2EIK8 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 558
Score = 33.9 bits (74), Expect = 3.4
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +1
Query: 244 RCQEDTQCSSGYYCEIALNICRECI--NCEELKREPSTRFPPNTCIKSVVDCGTCKKGLV 417
+C E+ C SGYY + + C C NC+ R PS ++C +V +C +CK
Sbjct: 273 KCVEN--CDSGYYQDSSTYTCTRCTVPNCKSCSRSPSI---CDSC--TVPNCNSCKS--- 322
Query: 418 LDHDADISGECVRP 459
DA I C P
Sbjct: 323 ---DASICESCSHP 333
>UniRef50_A0CGU2 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 998
Score = 33.9 bits (74), Expect = 3.4
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +1
Query: 199 LCFLMSLTYVSPQPVRCQEDTQCSSGYYCEIALNICRECINCEELKREPSTRFPPNTCIK 378
+CF S+T Q C + C G+ CE AL+ + C + K E + C+K
Sbjct: 273 ICFWFSITCTEGQQ-NCTASSGCK-GWSCENALSTSNTDLLCSQFKSECTVNETKTGCVK 330
Query: 379 SVVDCGTCK 405
C K
Sbjct: 331 RATACNLYK 339
>UniRef50_Q8NFU7 Cluster: CXXC-type zinc finger protein 6; n=6;
Eutheria|Rep: CXXC-type zinc finger protein 6 - Homo
sapiens (Human)
Length = 2136
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Frame = +1
Query: 247 CQEDTQCSSGYYCEIALN---ICRECINCEELKREPSTRFP 360
CQ+ T C YC+ N IC++ CEELK++PS P
Sbjct: 597 CQQKTNCGECTYCKNRKNSHQICKKR-KCEELKKKPSVVVP 636
>UniRef50_Q1D218 Cluster: OmpA family protein; n=3;
Cystobacterineae|Rep: OmpA family protein - Myxococcus
xanthus (strain DK 1622)
Length = 249
Score = 33.1 bits (72), Expect = 5.9
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +1
Query: 229 SPQPVRCQEDTQCSSGYYCE---IALNICRECINCEELKREPSTR--FPPNTCIKSVVDC 393
+P+P C D+ C SG CE A C++ C + S R P NTC S DC
Sbjct: 66 APKPPECTTDSACGSGRICEAGKCAEAQCQQDTQCPGGGKCESGRCQVPENTCASS-SDC 124
Query: 394 G 396
G
Sbjct: 125 G 125
>UniRef50_A6GHW4 Cluster: Putative lipoprotein; n=1; Plesiocystis
pacifica SIR-1|Rep: Putative lipoprotein - Plesiocystis
pacifica SIR-1
Length = 252
Score = 33.1 bits (72), Expect = 5.9
Identities = 19/81 (23%), Positives = 34/81 (41%), Gaps = 2/81 (2%)
Frame = +1
Query: 241 VRCQEDTQCSSGYYCEIALNICR--ECINCEELKREPSTRFPPNTCIKSVVDCGTCKKGL 414
+ CQ D C+ YC + +C+ E C++ S++ N + D G+C
Sbjct: 75 IGCQSDANCAENQYCNTDIMLCQNTEVPTCDDNDDCASSQVCINGYCSTPPDDGSCNLED 134
Query: 415 VLDHDADISGECVRPDDREES 477
L+ D + C+ D E+
Sbjct: 135 YLNDGCDSNAVCLVEDIETET 155
>UniRef50_Q55EH9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 201
Score = 33.1 bits (72), Expect = 5.9
Identities = 26/99 (26%), Positives = 47/99 (47%)
Frame = +1
Query: 190 ILSLCFLMSLTYVSPQPVRCQEDTQCSSGYYCEIALNICRECINCEELKREPSTRFPPNT 369
+L+L ++S+ YV+ P C + CS+ YC C++C K + ++
Sbjct: 7 LLALALIISVVYVNAVPDICVLSSDCSNTQYCSGGY-----CVSCRS-KNDCGLNEFCSS 60
Query: 370 CIKSVVDCGTCKKGLVLDHDADISGECVRPDDREESAVL 486
I + + G+CKK D D D +C+ ++ E S +L
Sbjct: 61 NIFDLNEFGSCKK---FDKDGD---DCIAYNNVEASNLL 93
>UniRef50_Q22WG6 Cluster: EGF-like domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: EGF-like domain
containing protein - Tetrahymena thermophila SB210
Length = 2581
Score = 33.1 bits (72), Expect = 5.9
Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 8/86 (9%)
Frame = +1
Query: 202 CFLMSLTYVSPQPVRCQEDTQCSSGYYCEIALNICRECINCEELKREPSTRFPPN----- 366
CF + Y+ P +C S+GYY +I NIC I + + + + N
Sbjct: 646 CF--DIMYLLPSTNQCVYTCDFSNGYYTQINTNICLSNILIQLVYIQQQNKQLQNIECDS 703
Query: 367 ---TCIKSVVDCGTCKKGLVLDHDAD 435
TC C C GL+L H D
Sbjct: 704 SCLTCQNYPTQCIVCANGLLLQHYPD 729
>UniRef50_Q22BS3 Cluster: Putative uncharacterized protein; n=2;
Alveolata|Rep: Putative uncharacterized protein -
Tetrahymena thermophila SB210
Length = 2087
Score = 33.1 bits (72), Expect = 5.9
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Frame = +1
Query: 238 PVRCQEDTQCSSGYYCEIALNICREC---INCEELKREPSTRFPPNTCIKSVV----DCG 396
P++C T+C S +Y E N+C+ C IN ++ S + TC +C
Sbjct: 498 PLKC---TKCESNFYFEGDTNVCKSCDVSIN-NYIENGVSCKQCDKTCSTCTAGGPNNCI 553
Query: 397 TCKKGLVLDHDADISGECVRPDD 465
TC G ++ ++ + +C +P +
Sbjct: 554 TCASGYIIHQESRMCVKCDQPGE 576
>UniRef50_A0E8Q5 Cluster: Chromosome undetermined scaffold_83, whole
genome shotgun sequence; n=3; Paramecium tetraurelia|Rep:
Chromosome undetermined scaffold_83, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 2921
Score = 33.1 bits (72), Expect = 5.9
Identities = 23/63 (36%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Frame = +1
Query: 265 CSSGYYCEIALNICRECINCEELKREPSTRFPPNTCIKSV-VDCGTCKKGLVLDHDADIS 441
C GYY + +C+ C EPS + TC S V+C +C G VL+ IS
Sbjct: 910 CDDGYYGDFQARLCQLC--------EPSCK----TCDNSTNVNCLSCNPGDVLNVKNIIS 957
Query: 442 GEC 450
GEC
Sbjct: 958 GEC 960
>UniRef50_A0E316 Cluster: Chromosome undetermined scaffold_76, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_76, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 1575
Score = 33.1 bits (72), Expect = 5.9
Identities = 21/57 (36%), Positives = 28/57 (49%)
Frame = +1
Query: 235 QPVRCQEDTQCSSGYYCEIALNICRECINCEELKREPSTRFPPNTCIKSVVDCGTCK 405
+P R D +CS GYY E +C +CIN ++ E F TC S +C CK
Sbjct: 1451 KPGRSGNDCKCSDGYY-ENGSILC-DCINYQQSYIE--CAFQCVTCSNSSSNCNKCK 1503
>UniRef50_Q234X7 Cluster: Putative uncharacterized protein; n=2;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 951
Score = 32.7 bits (71), Expect = 7.8
Identities = 19/74 (25%), Positives = 31/74 (41%), Gaps = 12/74 (16%)
Frame = +1
Query: 232 PQPVRCQED---TQCSSGYYCEIALNICRECI-NCEELKREPS--------TRFPPNTCI 375
P +CQ+ +QC SGY+ + C +CI NC+ ++C
Sbjct: 705 PNCTQCQDSQTCSQCQSGYFLDTLSRKCTKCINNCQTCSSSTQCITCLQGYLLSSKSSCF 764
Query: 376 KSVVDCGTCKKGLV 417
K + C TC + L+
Sbjct: 765 KCIEFCSTCNENLI 778
>UniRef50_A7S2W1 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 379
Score = 32.7 bits (71), Expect = 7.8
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 190 ILSLCFLMSLTYVSPQPVRCQEDTQCSSGYYCEIALNICRECINCEELKREPSTRFPPNT 369
+L L F T +S C+ T+CSSG+ C L++C + + + +P+ + P NT
Sbjct: 15 LLGLIFATQGTPMSEPDRSCKNSTECSSGHDCHPFLHVCFKRL---RIVNDPAPK-PQNT 70
Query: 370 -CI-KSVVDC 393
C+ KS C
Sbjct: 71 NCVCKSTEYC 80
>UniRef50_A6R4S4 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 1509
Score = 32.7 bits (71), Expect = 7.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +3
Query: 150 HFVYHHQNVQNDLDFVLVFFDVSHLRQPSTGSLSGRHAVL 269
H HH N++N F FF + +R P+T S SG A +
Sbjct: 1267 HRTIHHANIENPFPFPKGFFTAAVIRFPATCSESGLRATI 1306
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 535,744,381
Number of Sequences: 1657284
Number of extensions: 9596656
Number of successful extensions: 25730
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 24161
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25670
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48541014171
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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