Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12e04
         (645 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    29   0.033
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    22   5.0  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    22   5.0  
EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport pe...    21   6.6  
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    21   8.7  

>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 29.1 bits (62), Expect = 0.033
 Identities = 17/49 (34%), Positives = 23/49 (46%)
 Frame = +1

Query: 262 QCSSGYYCEIALNICRECINCEELKREPSTRFPPNTCIKSVVDCGTCKK 408
           QC  G  CEI + + R+C  C  LK+  S    P  C+   V C   +K
Sbjct: 223 QCKYGNNCEIDMYMRRKCQEC-RLKKCLSVGMRPE-CVVPEVQCAVKRK 269


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +1

Query: 256 DTQCSSGYYCEIALNICRECINCEELKREPSTRFPPNTCIKS 381
           D QC   Y   I   +   C +C  L REP      N C K+
Sbjct: 50  DIQCKGVYDKSIFAKLDSICEDCYMLFREPQLH---NLCRKN 88


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 14/42 (33%), Positives = 17/42 (40%)
 Frame = +1

Query: 256 DTQCSSGYYCEIALNICRECINCEELKREPSTRFPPNTCIKS 381
           D QC   Y   I   +   C +C  L REP      N C K+
Sbjct: 50  DIQCKGVYDKSIFAKLDSICEDCYMLFREPQLH---NLCRKN 88


>EF222298-1|ABN79658.1|  120|Tribolium castaneum ion transport
           peptide isoform B protein.
          Length = 120

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 256 DTQCSSGYYCEIALNICRECINCEELKREP 345
           D QC   Y   I   +   C +C  L REP
Sbjct: 50  DIQCKGVYDKSIFAKLDSICEDCYMLFREP 79


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/9 (77%), Positives = 9/9 (100%)
 Frame = -3

Query: 196 TKSKSFCTF 170
           +K+KSFCTF
Sbjct: 38  SKAKSFCTF 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,867
Number of Sequences: 336
Number of extensions: 2585
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)