Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12e04
         (645 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P...    37   0.020
AY119658-1|AAM50312.1| 1006|Drosophila melanogaster SD04414p pro...    30   3.1  
AF211192-1|AAF32278.1|  983|Drosophila melanogaster SULF1 protein.     30   3.1  
AE014297-2184|AAF55296.1| 1114|Drosophila melanogaster CG6725-PA...    30   3.1  
BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p pro...    28   9.4  

>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
            protein.
          Length = 23015

 Score = 37.1 bits (82), Expect = 0.020
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = +1

Query: 244  RCQEDTQCSSGYYCEIALNICRECIN-CEELKREPSTRFPPNTCIKSVVDC 393
            +C+ D  CS GY C+ ++N  +ECIN C  +   P+     N    ++ +C
Sbjct: 1622 KCKSDQDCSRGYGCQASVNGIKECINLCSNVVCGPNELCKINPAGHAICNC 1672


>AY119658-1|AAM50312.1| 1006|Drosophila melanogaster SD04414p
           protein.
          Length = 1006

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 343 VRASILRS*CILGKYSMLSHSNNHWSTACLPDNEP 239
           ++ + L   C+  K +  SH N HW TA L ++ P
Sbjct: 794 IKKARLEKECLSEKMNCFSHDNQHWRTAPLWNDSP 828


>AF211192-1|AAF32278.1|  983|Drosophila melanogaster SULF1 protein.
          Length = 983

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 343 VRASILRS*CILGKYSMLSHSNNHWSTACLPDNEP 239
           ++ + L   C+  K +  SH N HW TA L ++ P
Sbjct: 798 IKKARLEKECLSEKMNCFSHDNQHWRTAPLWNDSP 832


>AE014297-2184|AAF55296.1| 1114|Drosophila melanogaster CG6725-PA
            protein.
          Length = 1114

 Score = 29.9 bits (64), Expect = 3.1
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = -3

Query: 343  VRASILRS*CILGKYSMLSHSNNHWSTACLPDNEP 239
            ++ + L   C+  K +  SH N HW TA L ++ P
Sbjct: 902  IKKARLEKECLSEKMNCFSHDNQHWRTAPLWNDSP 936


>BT025854-1|ABF85754.1| 1031|Drosophila melanogaster IP15264p
           protein.
          Length = 1031

 Score = 28.3 bits (60), Expect = 9.4
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = +1

Query: 256 DTQCSSGYYCEIALNICRECIN 321
           +T C SGYY E    +CR C+N
Sbjct: 564 ETNCRSGYYGENCYKVCR-CLN 584


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,442,755
Number of Sequences: 53049
Number of extensions: 462216
Number of successful extensions: 1302
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1255
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1298
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)