Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12e04
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 31 0.92
AF026215-2|AAB71324.2| 533|Caenorhabditis elegans Udp-glucurono... 31 0.92
AF022972-6|AAM29670.1| 370|Caenorhabditis elegans Hypothetical ... 31 0.92
AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical ... 30 1.6
AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical ... 30 1.6
AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical... 29 2.1
U88311-3|AAB42345.1| 526|Caenorhabditis elegans Udp-glucuronosy... 29 3.7
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 29 3.7
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 29 3.7
U64837-2|AAB04836.3| 213|Caenorhabditis elegans Hypothetical pr... 28 4.9
U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical pr... 28 4.9
U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical pr... 28 4.9
AF022972-11|AAN84825.1| 370|Caenorhabditis elegans Udp-glucuron... 28 4.9
AF022972-10|AAC48233.2| 523|Caenorhabditis elegans Udp-glucuron... 28 4.9
AF022972-5|AAC48237.1| 523|Caenorhabditis elegans Udp-glucurono... 28 4.9
Z48582-1|CAA88465.1| 490|Caenorhabditis elegans Hypothetical pr... 28 6.5
AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical ... 28 6.5
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr... 27 8.6
AC025716-15|AAO21409.1| 521|Caenorhabditis elegans Udp-glucuron... 27 8.6
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical
protein K04H4.2c protein.
Length = 1446
Score = 30.7 bits (66), Expect = 0.92
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +1
Query: 241 VRCQEDTQCSSGYYCEIALNIC 306
+R Q D +C +G +C+ A+N+C
Sbjct: 792 IRAQGDGECPAGLHCDTAINLC 813
>AF026215-2|AAB71324.2| 533|Caenorhabditis elegans
Udp-glucuronosyltransferase protein36 protein.
Length = 533
Score = 30.7 bits (66), Expect = 0.92
Identities = 13/42 (30%), Positives = 25/42 (59%)
Frame = -2
Query: 443 PLISASWSNTNPFLHVPQSTTDLIQVLGGKRVDGSRFNSSQL 318
P SA ++N+NP++ P++T + +GG VD + S ++
Sbjct: 245 PFCSAVFTNSNPYIDYPRATLEKNVQVGGISVDIDKLKSQKV 286
>AF022972-6|AAM29670.1| 370|Caenorhabditis elegans Hypothetical
protein F10D2.12 protein.
Length = 370
Score = 30.7 bits (66), Expect = 0.92
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -2
Query: 452 THSPLISASWSNTNPFLHVPQSTTDLIQVLGGKRVDGSRFNSSQL 318
T P S + N+NPFL P+ T +GG VD ++ S QL
Sbjct: 83 TIEPEASFLFLNSNPFLDFPRPTLTKTVEIGGITVDLNQLKSQQL 127
>AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical
protein Y102A11A.2b protein.
Length = 753
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = -2
Query: 473 SSRSSGLTHSPLISASWSNTNPFLHVPQS 387
SSRSS LTH+P S SN N L P S
Sbjct: 257 SSRSSQLTHNPSFDYSSSNHNTKLEQPNS 285
>AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical
protein Y102A11A.2a protein.
Length = 772
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/29 (55%), Positives = 17/29 (58%)
Frame = -2
Query: 473 SSRSSGLTHSPLISASWSNTNPFLHVPQS 387
SSRSS LTH+P S SN N L P S
Sbjct: 257 SSRSSQLTHNPSFDYSSSNHNTKLEQPNS 285
>AL032623-16|CAA21511.2| 1816|Caenorhabditis elegans Hypothetical
protein Y43F8B.3a protein.
Length = 1816
Score = 29.5 bits (63), Expect = 2.1
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = +1
Query: 184 IWILSLCFLMSLTYVSPQPVRCQEDTQCSSGYYCEI 291
+W + V +P +C + CS+GY+C +
Sbjct: 526 VWTNPCAIGQPIMTVGQKPFQCHQGATCSTGYFCHL 561
>U88311-3|AAB42345.1| 526|Caenorhabditis elegans
Udp-glucuronosyltransferase protein27 protein.
Length = 526
Score = 28.7 bits (61), Expect = 3.7
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 443 PLISASWSNTNPFLHVPQSTTDLIQVLGGKRVDGSRFNSSQL 318
P S ++N+NP+L P+ +GG VD + S +L
Sbjct: 245 PAASLYFTNSNPYLDFPRPILQKTVSIGGISVDTKKIKSQEL 286
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/26 (34%), Positives = 16/26 (61%)
Frame = +1
Query: 229 SPQPVRCQEDTQCSSGYYCEIALNIC 306
S Q +RC+ + CS G+ C+ ++C
Sbjct: 527 SGQLIRCERSSDCSMGHMCDPNTHVC 552
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +1
Query: 229 SPQPVRCQEDTQCSSGYYC 285
S Q V C +TQC+SGY C
Sbjct: 120 SGQVVTCSTNTQCASGYTC 138
>U64837-2|AAB04836.3| 213|Caenorhabditis elegans Hypothetical
protein T27E4.5 protein.
Length = 213
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +1
Query: 244 RCQEDTQCSSGYYCE--IALNICRECINCEELKRE 342
+C+ D CSSGY CE C E + E++R+
Sbjct: 107 QCRMDITCSSGYSCENNSKTRCCMEANHSPEIERK 141
>U21323-2|AAM22051.1| 155|Caenorhabditis elegans Hypothetical
protein C45G9.6b protein.
Length = 155
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 247 CQEDTQCSSGYYCEIALNICRECIN 321
C +T C SG YC ++N + C++
Sbjct: 66 CNSNTDCRSGLYCTASVNGVKICLS 90
>U21323-1|AAM22050.1| 542|Caenorhabditis elegans Hypothetical
protein C45G9.6a protein.
Length = 542
Score = 28.3 bits (60), Expect = 4.9
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +1
Query: 247 CQEDTQCSSGYYCEIALNICRECIN 321
C +T C SG YC ++N + C++
Sbjct: 66 CNSNTDCRSGLYCTASVNGVKICLS 90
>AF022972-11|AAN84825.1| 370|Caenorhabditis elegans
Udp-glucuronosyltransferase protein39, isoform b
protein.
Length = 370
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 443 PLISASWSNTNPFLHVPQST-TDLIQVLGGKRVDGSRFNSSQL 318
P S + N+NPF+ P+ T T IQ+ GG VD + S +L
Sbjct: 86 PEASFVFLNSNPFVDFPRPTLTKTIQI-GGISVDSNELRSQKL 127
>AF022972-10|AAC48233.2| 523|Caenorhabditis elegans
Udp-glucuronosyltransferase protein39, isoform a
protein.
Length = 523
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 443 PLISASWSNTNPFLHVPQST-TDLIQVLGGKRVDGSRFNSSQL 318
P S + N+NPF+ P+ T T IQ+ GG VD + S +L
Sbjct: 239 PEASFVFLNSNPFVDFPRPTLTKTIQI-GGISVDSNELRSQKL 280
>AF022972-5|AAC48237.1| 523|Caenorhabditis elegans
Udp-glucuronosyltransferase protein38 protein.
Length = 523
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = -2
Query: 443 PLISASWSNTNPFLHVPQST-TDLIQVLGGKRVDGSRFNSSQL 318
P S + N+NPF+ P+ T T IQ+ GG VD + S +L
Sbjct: 239 PEASFVFLNSNPFVDFPRPTLTKTIQI-GGISVDSNELRSQKL 280
>Z48582-1|CAA88465.1| 490|Caenorhabditis elegans Hypothetical
protein F27E5.3 protein.
Length = 490
Score = 27.9 bits (59), Expect = 6.5
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -2
Query: 518 PMTISAHT*GGNTALSSRSSGLTHSPLISASWSNTNPFLHVPQSTTDLI 372
P T+ GN+ + S ++ P ++ S TNP LH P S D I
Sbjct: 296 PSTVDTTGSSGNSTDPTTRSNTSNVPSGTSEASITNPILHSPPSKFDNI 344
>AC024830-9|ABQ13052.1| 1594|Caenorhabditis elegans Hypothetical
protein Y55F3BR.2 protein.
Length = 1594
Score = 27.9 bits (59), Expect = 6.5
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +1
Query: 217 LTYVSPQPVRCQEDTQCSSGYYCEIALNIC 306
LT + P RC DT C S + C + +C
Sbjct: 507 LTNGNGSPQRCARDTDCPSTHTCAMEHQVC 536
>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
protein C34F6.1 protein.
Length = 1043
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +1
Query: 217 LTYVSPQPVRCQEDTQCSSGYYCEIALNICRECINCEELKREP 345
L + +PV C + C +GYYC + E NC R P
Sbjct: 732 LLSLQKEPVICGGEDTCPNGYYCHV--GGAPETTNCCPGTRRP 772
>AC025716-15|AAO21409.1| 521|Caenorhabditis elegans
Udp-glucuronosyltransferase protein31 protein.
Length = 521
Score = 27.5 bits (58), Expect = 8.6
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = -2
Query: 443 PLISASWSNTNPFLHVPQSTTDLIQVLGGKRVDGSRFNSSQL 318
P S ++N+NP+L P+ +GG VD + S +L
Sbjct: 244 PSASLMFTNSNPYLDFPRPVLQKTVGIGGITVDMEQIKSEKL 285
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,532,315
Number of Sequences: 27780
Number of extensions: 242233
Number of successful extensions: 832
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 750
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -