Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12d07
         (761 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY113498-1|AAM29503.1|  148|Drosophila melanogaster RE54849p pro...   212   4e-55
AE014297-2487|AAS65169.1|  148|Drosophila melanogaster CG8053-PB...   212   4e-55
AE014297-2486|AAF55526.1|  148|Drosophila melanogaster CG8053-PA...   212   4e-55
AF169359-1|AAF44294.1|  148|Drosophila melanogaster eukaryotic t...   210   1e-54
BT025911-1|ABG02155.1|  159|Drosophila melanogaster IP07317p pro...    32   0.74 
AE014134-687|AAN10365.1|  159|Drosophila melanogaster CG31957-PA...    32   0.74 
AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin pro...    30   4.0  
AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC...    30   4.0  
BT003521-1|AAO39525.1|  519|Drosophila melanogaster RE24718p pro...    29   6.9  
AE014298-2324|AAF48561.2|  519|Drosophila melanogaster CG14948-P...    29   6.9  

>AY113498-1|AAM29503.1|  148|Drosophila melanogaster RE54849p
           protein.
          Length = 148

 Score =  212 bits (518), Expect = 4e-55
 Identities = 96/108 (88%), Positives = 102/108 (94%)
 Frame = +2

Query: 167 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINXGDIILIGLRDYQ 346
           L+FKED QEYAQVTKMLGNGRLEAMCFDG+KRLCHIRGKLRKKVWIN GDIIL+GLRDYQ
Sbjct: 26  LIFKEDQQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINQGDIILVGLRDYQ 85

Query: 347 DAKADVILKYTPDEARNLKTYGEFPETVRINETVVYSVDGLDEDIEFG 490
           D+KADVILKYTPDEARNLKTYGEFPE+VRINETV +  DG DEDIEFG
Sbjct: 86  DSKADVILKYTPDEARNLKTYGEFPESVRINETVTFVEDGFDEDIEFG 133


>AE014297-2487|AAS65169.1|  148|Drosophila melanogaster CG8053-PB,
           isoform B protein.
          Length = 148

 Score =  212 bits (518), Expect = 4e-55
 Identities = 96/108 (88%), Positives = 102/108 (94%)
 Frame = +2

Query: 167 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINXGDIILIGLRDYQ 346
           L+FKED QEYAQVTKMLGNGRLEAMCFDG+KRLCHIRGKLRKKVWIN GDIIL+GLRDYQ
Sbjct: 26  LIFKEDQQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINQGDIILVGLRDYQ 85

Query: 347 DAKADVILKYTPDEARNLKTYGEFPETVRINETVVYSVDGLDEDIEFG 490
           D+KADVILKYTPDEARNLKTYGEFPE+VRINETV +  DG DEDIEFG
Sbjct: 86  DSKADVILKYTPDEARNLKTYGEFPESVRINETVTFVEDGFDEDIEFG 133


>AE014297-2486|AAF55526.1|  148|Drosophila melanogaster CG8053-PA,
           isoform A protein.
          Length = 148

 Score =  212 bits (518), Expect = 4e-55
 Identities = 96/108 (88%), Positives = 102/108 (94%)
 Frame = +2

Query: 167 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINXGDIILIGLRDYQ 346
           L+FKED QEYAQVTKMLGNGRLEAMCFDG+KRLCHIRGKLRKKVWIN GDIIL+GLRDYQ
Sbjct: 26  LIFKEDQQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINQGDIILVGLRDYQ 85

Query: 347 DAKADVILKYTPDEARNLKTYGEFPETVRINETVVYSVDGLDEDIEFG 490
           D+KADVILKYTPDEARNLKTYGEFPE+VRINETV +  DG DEDIEFG
Sbjct: 86  DSKADVILKYTPDEARNLKTYGEFPESVRINETVTFVEDGFDEDIEFG 133


>AF169359-1|AAF44294.1|  148|Drosophila melanogaster eukaryotic
           translation initiationfactor 1A protein.
          Length = 148

 Score =  210 bits (514), Expect = 1e-54
 Identities = 95/108 (87%), Positives = 102/108 (94%)
 Frame = +2

Query: 167 LVFKEDGQEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINXGDIILIGLRDYQ 346
           L+FKED QEYAQVTKMLGNGRLEAMCFDG+KRLCHIRGKLRKKVWIN G+IIL+GLRDYQ
Sbjct: 26  LIFKEDQQEYAQVTKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINQGEIILVGLRDYQ 85

Query: 347 DAKADVILKYTPDEARNLKTYGEFPETVRINETVVYSVDGLDEDIEFG 490
           D+KADVILKYTPDEARNLKTYGEFPE+VRINETV +  DG DEDIEFG
Sbjct: 86  DSKADVILKYTPDEARNLKTYGEFPESVRINETVTFVEDGFDEDIEFG 133


>BT025911-1|ABG02155.1|  159|Drosophila melanogaster IP07317p
           protein.
          Length = 159

 Score = 32.3 bits (70), Expect = 0.74
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = +2

Query: 188 QEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINXGDIILI-GLRDYQDAKADV 364
           Q+ A+V    GN   E    D    L  +  K RK +W+  GD +L+  + +    KA++
Sbjct: 30  QQIARVISSRGNNLHEVETVDETF-LVSMPNKFRKSMWVKRGDFLLVEPIEEGDKVKAEI 88

Query: 365 ILKYTPDEARNLKTYGEFPE 424
               TP+  +       +P+
Sbjct: 89  CKILTPEHIKEYTKAAIWPD 108


>AE014134-687|AAN10365.1|  159|Drosophila melanogaster CG31957-PA
           protein.
          Length = 159

 Score = 32.3 bits (70), Expect = 0.74
 Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
 Frame = +2

Query: 188 QEYAQVTKMLGNGRLEAMCFDGIKRLCHIRGKLRKKVWINXGDIILI-GLRDYQDAKADV 364
           Q+ A+V    GN   E    D    L  +  K RK +W+  GD +L+  + +    KA++
Sbjct: 30  QQIARVISSRGNNLHEVETVDETF-LVSMPNKFRKSMWVKRGDFLLVEPIEEGDKVKAEI 88

Query: 365 ILKYTPDEARNLKTYGEFPE 424
               TP+  +       +P+
Sbjct: 89  CKILTPEHIKEYTKAAIWPD 108


>AJ271740-1|CAB93524.1| 16215|Drosophila melanogaster D-Titin protein.
          Length = 16215

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
 Frame = +2

Query: 230  LEAMCFDGIKRLCHIRGKLRKKVWINXGDIILIGLRDYQDAKAD--VILKYTPDEARNLK 403
            +E +  DG  +   IR ++ KKV  +  ++  I   +  D + +  V ++  P E   L+
Sbjct: 9396 VETVTEDGKPKKKKIRTRVIKKVKGDKQEVTKIETVEEDDKQPETTVTVEEVPYEEEKLE 9455

Query: 404  TYGEFPETVRINETV 448
               E PE VR+ ETV
Sbjct: 9456 EIQELPEEVRVVETV 9470


>AE014296-405|AAG22226.2| 18074|Drosophila melanogaster CG1915-PC,
             isoform C protein.
          Length = 18074

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
 Frame = +2

Query: 230   LEAMCFDGIKRLCHIRGKLRKKVWINXGDIILIGLRDYQDAKAD--VILKYTPDEARNLK 403
             +E +  DG  +   IR ++ KKV  +  ++  I   +  D + +  V ++  P E   L+
Sbjct: 11242 VETVTEDGKPKKKKIRTRVIKKVKGDKQEVTKIETVEEDDKQPETTVTVEEVPYEEEKLE 11301

Query: 404   TYGEFPETVRINETV 448
                E PE VR+ ETV
Sbjct: 11302 EIQELPEEVRVVETV 11316


>BT003521-1|AAO39525.1|  519|Drosophila melanogaster RE24718p
           protein.
          Length = 519

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 14/63 (22%), Positives = 27/63 (42%)
 Frame = +3

Query: 114 EEKIGGEERTKMKLKNVSWSLRKTDKSTPKSQRCSVMAAWRPCALMASNACVTSEGNYEK 293
           + K  G++  K   K ++W+  +       ++R SV   W    +   +A ++  GNY  
Sbjct: 401 QHKFSGQDLEKYFTKFITWAKDEEPLQGMTNRRLSVSDVWLTSRISIGDAKLSDSGNYSC 460

Query: 294 KCG 302
             G
Sbjct: 461 SLG 463


>AE014298-2324|AAF48561.2|  519|Drosophila melanogaster CG14948-PA
           protein.
          Length = 519

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 14/63 (22%), Positives = 27/63 (42%)
 Frame = +3

Query: 114 EEKIGGEERTKMKLKNVSWSLRKTDKSTPKSQRCSVMAAWRPCALMASNACVTSEGNYEK 293
           + K  G++  K   K ++W+  +       ++R SV   W    +   +A ++  GNY  
Sbjct: 401 QHKFSGQDLEKYFTKFITWAKDEEPLQGMTNRRLSVSDVWLTSRISIGDAKLSDSGNYSC 460

Query: 294 KCG 302
             G
Sbjct: 461 SLG 463


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,649,812
Number of Sequences: 53049
Number of extensions: 508501
Number of successful extensions: 1080
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1080
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3499501170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)