Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12d06
         (913 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC125049-1|AAI25050.1|  401|Homo sapiens keratin associated prot...    31   4.4  
BC125048-1|AAI25049.1|  401|Homo sapiens keratin associated prot...    31   4.4  
AB076351-1|BAD01538.1|  401|Homo sapiens keratin associated prot...    31   4.4  

>BC125049-1|AAI25050.1|  401|Homo sapiens keratin associated protein
           10-4 protein.
          Length = 401

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = +3

Query: 336 SCSCAPR*PTRRSCKIGFTNTCCPSAPPDS--RR*ACSKTPKRQ*SLIPLPSRAISMRPR 509
           S  C P       C+ G T++C PS    S  +   C+ +P +Q   +P+  + +  +P 
Sbjct: 64  SSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVCCKP- 122

Query: 510 RCCTP 524
            CC P
Sbjct: 123 VCCVP 127


>BC125048-1|AAI25049.1|  401|Homo sapiens keratin associated protein
           10-4 protein.
          Length = 401

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = +3

Query: 336 SCSCAPR*PTRRSCKIGFTNTCCPSAPPDS--RR*ACSKTPKRQ*SLIPLPSRAISMRPR 509
           S  C P       C+ G T++C PS    S  +   C+ +P +Q   +P+  + +  +P 
Sbjct: 64  SSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVCCKP- 122

Query: 510 RCCTP 524
            CC P
Sbjct: 123 VCCVP 127


>AB076351-1|BAD01538.1|  401|Homo sapiens keratin associated protein
           protein.
          Length = 401

 Score = 31.5 bits (68), Expect = 4.4
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
 Frame = +3

Query: 336 SCSCAPR*PTRRSCKIGFTNTCCPSAPPDS--RR*ACSKTPKRQ*SLIPLPSRAISMRPR 509
           S  C P       C+ G T++C PS    S  +   C+ +P +Q   +P+  + +  +P 
Sbjct: 64  SSPCCPVTCEPSPCQSGCTSSCTPSCCQQSSCQLACCASSPCQQACCVPVCCKTVCCKP- 122

Query: 510 RCCTP 524
            CC P
Sbjct: 123 VCCVP 127


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 112,070,247
Number of Sequences: 237096
Number of extensions: 2252086
Number of successful extensions: 9841
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9840
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11825849886
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)