Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12d04
         (692 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR450300-1|CAG29296.1|  374|Homo sapiens GA17 protein.                158   2e-38
BC051292-1|AAH51292.1|  374|Homo sapiens eukaryotic translation ...   158   2e-38
BC019103-1|AAH19103.1|  374|Homo sapiens PCI domain containing 1...   158   2e-38
AY769947-1|AAX12524.1|  374|Homo sapiens fetal lung protein B5 p...   158   2e-38
AK222564-1|BAD96284.1|  374|Homo sapiens dendritic cell protein ...   158   2e-38
AF064603-1|AAC17108.1|  374|Homo sapiens GA17 protein protein.        158   2e-38
DQ185042-1|ABD14422.1|  136|Homo sapiens dendritic cell protein ...   108   2e-23
AL136233-1|CAI17232.1|  196|Homo sapiens RUN and FYVE domain con...    32   1.7  
AF461266-1|AAL67520.1|  606|Homo sapiens RUFY2 protein.                32   1.7  
AF411980-1|AAL04164.1|  590|Homo sapiens Run- and FYVE-domain co...    32   1.7  
AB040970-1|BAA96061.1|  619|Homo sapiens KIAA1537 protein protein.     32   1.7  
AL133230-3|CAI21688.2|  946|Homo sapiens chromosome 20 open read...    31   3.0  
AK056792-1|BAB71286.1|  593|Homo sapiens protein ( Homo sapiens ...    31   3.0  

>CR450300-1|CAG29296.1|  374|Homo sapiens GA17 protein.
          Length = 374

 Score =  158 bits (384), Expect = 2e-38
 Identities = 85/202 (42%), Positives = 134/202 (66%), Gaps = 1/202 (0%)
 Frame = +1

Query: 88  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 267
           M  PA F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  + 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58

Query: 268 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 447
           D+E+++NS+VS+++ +  ++ E LI +  ++L K    +   + LQ L  L++ ++ N+P
Sbjct: 59  DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118

Query: 448 LRYHVYYHVIELAARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNS 624
           +RY VY  +I++AA  G ++ + T ++Q+RK  ++   + E+   L RLL++ L D + S
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKS 178

Query: 625 ELAAKVMIELLGTYTDENASYA 690
           + A+KVM+ELLG+YT++NAS A
Sbjct: 179 DAASKVMVELLGSYTEDNASQA 200


>BC051292-1|AAH51292.1|  374|Homo sapiens eukaryotic translation
           initiation factor 3, subunit M protein.
          Length = 374

 Score =  158 bits (384), Expect = 2e-38
 Identities = 85/202 (42%), Positives = 134/202 (66%), Gaps = 1/202 (0%)
 Frame = +1

Query: 88  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 267
           M  PA F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  + 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58

Query: 268 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 447
           D+E+++NS+VS+++ +  ++ E LI +  ++L K    +   + LQ L  L++ ++ N+P
Sbjct: 59  DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118

Query: 448 LRYHVYYHVIELAARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNS 624
           +RY VY  +I++AA  G ++ + T ++Q+RK  ++   + E+   L RLL++ L D + S
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKS 178

Query: 625 ELAAKVMIELLGTYTDENASYA 690
           + A+KVM+ELLG+YT++NAS A
Sbjct: 179 DAASKVMVELLGSYTEDNASQA 200


>BC019103-1|AAH19103.1|  374|Homo sapiens PCI domain containing 1
           (herpesvirus entry mediator) protein.
          Length = 374

 Score =  158 bits (384), Expect = 2e-38
 Identities = 85/202 (42%), Positives = 134/202 (66%), Gaps = 1/202 (0%)
 Frame = +1

Query: 88  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 267
           M  PA F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  + 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58

Query: 268 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 447
           D+E+++NS+VS+++ +  ++ E LI +  ++L K    +   + LQ L  L++ ++ N+P
Sbjct: 59  DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118

Query: 448 LRYHVYYHVIELAARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNS 624
           +RY VY  +I++AA  G ++ + T ++Q+RK  ++   + E+   L RLL++ L D + S
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKS 178

Query: 625 ELAAKVMIELLGTYTDENASYA 690
           + A+KVM+ELLG+YT++NAS A
Sbjct: 179 DAASKVMVELLGSYTEDNASQA 200


>AY769947-1|AAX12524.1|  374|Homo sapiens fetal lung protein B5
           protein.
          Length = 374

 Score =  158 bits (384), Expect = 2e-38
 Identities = 85/202 (42%), Positives = 134/202 (66%), Gaps = 1/202 (0%)
 Frame = +1

Query: 88  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 267
           M  PA F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  + 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58

Query: 268 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 447
           D+E+++NS+VS+++ +  ++ E LI +  ++L K    +   + LQ L  L++ ++ N+P
Sbjct: 59  DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118

Query: 448 LRYHVYYHVIELAARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNS 624
           +RY VY  +I++AA  G ++ + T ++Q+RK  ++   + E+   L RLL++ L D + S
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKS 178

Query: 625 ELAAKVMIELLGTYTDENASYA 690
           + A+KVM+ELLG+YT++NAS A
Sbjct: 179 DAASKVMVELLGSYTEDNASQA 200


>AK222564-1|BAD96284.1|  374|Homo sapiens dendritic cell protein
           variant protein.
          Length = 374

 Score =  158 bits (384), Expect = 2e-38
 Identities = 85/202 (42%), Positives = 134/202 (66%), Gaps = 1/202 (0%)
 Frame = +1

Query: 88  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 267
           M  PA F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  + 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58

Query: 268 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 447
           D+E+++NS+VS+++ +  ++ E LI +  ++L K    +   + LQ L  L++ ++ N+P
Sbjct: 59  DVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118

Query: 448 LRYHVYYHVIELAARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNS 624
           +RY VY  +I++AA  G ++ + T ++Q+RK  ++   + E+   L RLL++ L D + S
Sbjct: 119 VRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKS 178

Query: 625 ELAAKVMIELLGTYTDENASYA 690
           + A+KVM+ELLG+YT++NAS A
Sbjct: 179 DAASKVMVELLGSYTEDNASQA 200


>AF064603-1|AAC17108.1|  374|Homo sapiens GA17 protein protein.
          Length = 374

 Score =  158 bits (384), Expect = 2e-38
 Identities = 85/202 (42%), Positives = 133/202 (65%), Gaps = 1/202 (0%)
 Frame = +1

Query: 88  MQGPAVFMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSES 267
           M  PA F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  + 
Sbjct: 1   MSVPA-FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDK 58

Query: 268 DIEAILNSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSP 447
           D+E+++NS+VS+++ +  ++ E LI +  ++L K    +   + LQ L  L++ ++ N+P
Sbjct: 59  DVESVVNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTP 118

Query: 448 LRYHVYYHVIELAARVGFVREVFTGVEQLRKEFANCPPSNEQMQKLYRLLHQVLKD-QNS 624
           +RY VY  +IE+ A  G ++ + T ++Q+RK  ++   + E+   L RLL++ L D + S
Sbjct: 119 VRYTVYCSLIEVVASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALADCKKS 178

Query: 625 ELAAKVMIELLGTYTDENASYA 690
           + A+KVM+ELLG+YT++NAS A
Sbjct: 179 DAASKVMVELLGSYTEDNASQA 200


>DQ185042-1|ABD14422.1|  136|Homo sapiens dendritic cell protein
           GA17 protein.
          Length = 136

 Score =  108 bits (259), Expect = 2e-23
 Identities = 55/134 (41%), Positives = 87/134 (64%)
 Frame = +1

Query: 106 FMDISLEDQALELRRYFKSLGAEISEEKSPKGIEDDLHKIVGVCDACFKEPSESDIEAIL 285
           F+DIS EDQA ELR Y KS GAEISEE S  G+  DL +I+  CD C KE  + D+E+++
Sbjct: 3   FIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKE-DDKDVESVM 61

Query: 286 NSIVSIMVSIPLERGENLILAFSQRLTKAPGPKLGMVALQSLWRLYNNLEPNSPLRYHVY 465
           NS+VS+++ +  ++ E LI +  ++L K    +   + LQ L  L++ ++ N+P+R  VY
Sbjct: 62  NSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRCTVY 121

Query: 466 YHVIELAARVGFVR 507
             +I++AA  G ++
Sbjct: 122 CSLIKVAASCGAIQ 135


>AL136233-1|CAI17232.1|  196|Homo sapiens RUN and FYVE domain
           containing 2 protein.
          Length = 196

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +1

Query: 532 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELA-AKVMIE 651
           L+KEF N    N+Q++K+Y    Q L++  ++L+ +K+ IE
Sbjct: 73  LKKEFLNLQDENQQLKKIYHEQEQALQELGNKLSESKLKIE 113


>AF461266-1|AAL67520.1|  606|Homo sapiens RUFY2 protein.
          Length = 606

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +1

Query: 532 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELA-AKVMIE 651
           L+KEF N    N+Q++K+Y    Q L++  ++L+ +K+ IE
Sbjct: 483 LKKEFLNLQDENQQLKKIYHEQEQALQELGNKLSESKLKIE 523


>AF411980-1|AAL04164.1|  590|Homo sapiens Run- and FYVE-domain
           containing protein Rabip4R protein.
          Length = 590

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +1

Query: 532 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELA-AKVMIE 651
           L+KEF N    N+Q++K+Y    Q L++  ++L+ +K+ IE
Sbjct: 467 LKKEFLNLQDENQQLKKIYHEQEQALQELGNKLSESKLKIE 507


>AB040970-1|BAA96061.1|  619|Homo sapiens KIAA1537 protein protein.
          Length = 619

 Score = 32.3 bits (70), Expect = 1.7
 Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
 Frame = +1

Query: 532 LRKEFANCPPSNEQMQKLYRLLHQVLKDQNSELA-AKVMIE 651
           L+KEF N    N+Q++K+Y    Q L++  ++L+ +K+ IE
Sbjct: 496 LKKEFLNLQDENQQLKKIYHEQEQALQELGNKLSESKLKIE 536


>AL133230-3|CAI21688.2|  946|Homo sapiens chromosome 20 open reading
           frame 175 protein.
          Length = 946

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = +1

Query: 520 GVEQLRKEFANCPPS---NEQMQKLYRLLHQVLKD 615
           G   +++ FA CPPS    E +Q+L R LH+  +D
Sbjct: 155 GASSMQRAFARCPPSRAARESLQELGRSLHECAED 189


>AK056792-1|BAB71286.1|  593|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32230 fis, clone PLACE6004464, weakly similar to
           Human placenta (Diff48) mRNA. ).
          Length = 593

 Score = 31.5 bits (68), Expect = 3.0
 Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = +1

Query: 520 GVEQLRKEFANCPPS---NEQMQKLYRLLHQVLKD 615
           G   +++ FA CPPS    E +Q+L R LH+  +D
Sbjct: 155 GASSMQRAFARCPPSRAARESLQELGRSLHECAED 189


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,026,540
Number of Sequences: 237096
Number of extensions: 1698847
Number of successful extensions: 4027
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3878
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4014
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)