Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12d02
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   2.6  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.6  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.4  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.4  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   4.5  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.0  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    21   7.9  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    21   7.9  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    21   7.9  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 658 RWPKFLRKW 684
           RWPKF++ W
Sbjct: 108 RWPKFVKDW 116


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +1

Query: 658 RWPKFLRKW 684
           RWPKF++ W
Sbjct: 108 RWPKFVKDW 116


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 23/98 (23%), Positives = 40/98 (40%), Gaps = 4/98 (4%)
 Frame = +3

Query: 120  TVLDEPAQPETGVDFSGKSLKL-DTAKDAQLIVDAINKCPNLQY--LALTGNTLGV-TAA 287
            TV  +P   +   +    S K+    ++  L   A N   NL+Y        T+G    +
Sbjct: 1235 TVYYKPVSTDDKTEVKPTSQKIVPNLRNQNLSHQAKNLDSNLKYEFWVTAATTIGEGQPS 1294

Query: 288  QAISKALESHPELKIARFSDMFTGRMKTEIPPALSALG 401
            + ++ +  +    KIA F D FT   K ++     A+G
Sbjct: 1295 KKVTVSPSASVPAKIASFDDTFTTTYKEDVTLPCLAVG 1332


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +2

Query: 236 EPPISCVDRQYTRCDSR 286
           E P++C D   +RC+SR
Sbjct: 71  EDPLNCRDLPNSRCNSR 87


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +1

Query: 649 VPPRWPKFLRKW 684
           V  RWP FL +W
Sbjct: 112 VASRWPLFLNEW 123


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 32  LRFCVIFIFYLLYLLHKL 85
           L FC  FIF+ ++LL  L
Sbjct: 180 LLFCCAFIFFNMHLLFLL 197


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 4/10 (40%), Positives = 9/10 (90%)
 Frame = +1

Query: 658 RWPKFLRKWA 687
           +WP+F++ W+
Sbjct: 125 KWPRFMKDWS 134


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 4/10 (40%), Positives = 9/10 (90%)
 Frame = +1

Query: 658 RWPKFLRKWA 687
           +WP+F++ W+
Sbjct: 125 KWPRFMKDWS 134


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 4/10 (40%), Positives = 9/10 (90%)
 Frame = +1

Query: 658 RWPKFLRKWA 687
           +WP+F++ W+
Sbjct: 125 KWPRFMKDWS 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,304
Number of Sequences: 336
Number of extensions: 3535
Number of successful extensions: 13
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)