Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12d02
(748 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X82260-1|CAA57714.1| 587|Homo sapiens RanGAP1 protein. 198 2e-50
CR456557-1|CAG30443.1| 587|Homo sapiens RANGAP1 protein. 198 2e-50
BC041396-1|AAH41396.1| 587|Homo sapiens RANGAP1 protein protein. 198 2e-50
BC014044-1|AAH14044.1| 587|Homo sapiens Ran GTPase activating p... 198 2e-50
AL035681-3|CAB63073.1| 587|Homo sapiens Ran GTPase activating p... 198 2e-50
AB058738-1|BAB47464.1| 623|Homo sapiens KIAA1835 protein protein. 198 2e-50
AJ303140-1|CAC42117.1| 1013|Homo sapiens LRR-containing protein ... 38 0.051
AF178930-1|AAG33677.1| 1040|Homo sapiens NOD2 protein protein. 38 0.051
EF452237-1|ABO40480.1| 975|Homo sapiens NOD5 protein. 34 0.62
BC110890-1|AAI10891.1| 975|Homo sapiens NLRX1 protein protein. 34 0.62
AY245437-1|AAP31240.1| 975|Homo sapiens NOD26 protein. 34 0.62
AK025131-1|BAB15075.1| 554|Homo sapiens protein ( Homo sapiens ... 34 0.62
AB094095-1|BAC76049.1| 975|Homo sapiens DLNB26 protein. 34 0.62
X86018-1|CAA60013.1| 617|Homo sapiens muf1 protein. 33 1.1
BX537366-1|CAD97609.1| 617|Homo sapiens hypothetical protein pr... 33 1.1
BC101524-1|AAI01525.1| 812|Homo sapiens leucine rich repeat con... 33 1.1
BC101522-1|AAI01523.1| 812|Homo sapiens leucine rich repeat con... 33 1.1
BC092479-1|AAH92479.1| 668|Homo sapiens LRRC41 protein protein. 33 1.1
BC004953-1|AAH04953.2| 572|Homo sapiens LRRC41 protein protein. 33 1.1
AL122001-5|CAI21964.1| 812|Homo sapiens leucine rich repeat con... 33 1.1
AL121602-2|CAI22118.1| 812|Homo sapiens leucine rich repeat con... 33 1.1
AK223420-1|BAD97140.1| 614|Homo sapiens MUF1 protein variant pr... 33 1.1
AK125827-1|BAC86308.1| 620|Homo sapiens protein ( Homo sapiens ... 33 1.1
BC121160-1|AAI21161.1| 462|Homo sapiens chromosome 14 open read... 33 1.4
BC121159-1|AAI21160.1| 462|Homo sapiens chromosome 14 open read... 33 1.4
BC071866-1|AAH71866.1| 460|Homo sapiens LRFN4 protein protein. 33 1.4
BC015581-1|AAH15581.2| 635|Homo sapiens leucine rich repeat and... 33 1.4
BC007718-1|AAH07718.1| 541|Homo sapiens LRFN4 protein protein. 33 1.4
AY601811-1|AAT48367.1| 1065|Homo sapiens caterpiller 16.2 protein. 33 1.4
AK074109-1|BAB84935.1| 499|Homo sapiens FLJ00180 protein protein. 33 1.4
AF111169-4|AAD44364.1| 608|Homo sapiens unknown protein. 33 1.4
AB209005-1|BAD92242.1| 622|Homo sapiens leucine rich repeat and... 33 1.4
AL160037-1|CAH72024.1| 1371|Homo sapiens leucine rich repeat con... 32 1.9
AL024509-3|CAI21665.1| 1371|Homo sapiens leucine rich repeat con... 32 1.9
AL022170-1|CAI21583.1| 1371|Homo sapiens leucine rich repeat con... 32 1.9
AY051117-1|AAL12497.1| 1034|Homo sapiens cryopyrin protein. 32 2.5
AL606804-10|CAI17153.1| 1036|Homo sapiens NLR family, pyrin doma... 32 2.5
AF468522-1|AAL78632.1| 1036|Homo sapiens NALP3 long isoform prot... 32 2.5
AF420469-1|AAL65136.1| 1034|Homo sapiens PYRIN-containing APAF1-... 32 2.5
AF410477-1|AAL33908.1| 1034|Homo sapiens cryopyrin protein. 32 2.5
AB208891-1|BAD92128.1| 983|Homo sapiens Cryopyrin deletion 4 is... 32 2.5
AB113647-1|BAD26751.1| 1475|Homo sapiens RGD, leucine-rich repea... 31 5.8
>X82260-1|CAA57714.1| 587|Homo sapiens RanGAP1 protein.
Length = 587
Score = 198 bits (482), Expect = 2e-50
Identities = 111/228 (48%), Positives = 140/228 (61%), Gaps = 9/228 (3%)
Frame = +3
Query: 90 MATFDLNSLNTVLDEPAQPETGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNT 269
MA+ D+ L L + + F GKSLKL+TA+DA+ ++ I +L+ L L GNT
Sbjct: 1 MASEDIAKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNT 60
Query: 270 LGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLS 449
+GV AA+ I+KALE ELK +SDMFTGR++TEIPPAL +LG+G+I AGA+L LDLS
Sbjct: 61 VGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLS 120
Query: 450 DNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGG---------XXXXXXXXXXXX 602
DNAFGP GV+G LL+S C I GG
Sbjct: 121 DNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPL 180
Query: 603 XXXVFIAGRNRLENDGATALAKVFKEMGSLEEIAMPQNGIYHVGITAL 746
VF+AGRNRLENDGATALA+ F+ +G+LEE+ MPQNGI H GITAL
Sbjct: 181 ALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITAL 228
>CR456557-1|CAG30443.1| 587|Homo sapiens RANGAP1 protein.
Length = 587
Score = 198 bits (482), Expect = 2e-50
Identities = 111/228 (48%), Positives = 140/228 (61%), Gaps = 9/228 (3%)
Frame = +3
Query: 90 MATFDLNSLNTVLDEPAQPETGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNT 269
MA+ D+ L L + + F GKSLKL+TA+DA+ ++ I +L+ L L GNT
Sbjct: 1 MASEDIAKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNT 60
Query: 270 LGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLS 449
+GV AA+ I+KALE ELK +SDMFTGR++TEIPPAL +LG+G+I AGA+L LDLS
Sbjct: 61 VGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLS 120
Query: 450 DNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGG---------XXXXXXXXXXXX 602
DNAFGP GV+G LL+S C I GG
Sbjct: 121 DNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPL 180
Query: 603 XXXVFIAGRNRLENDGATALAKVFKEMGSLEEIAMPQNGIYHVGITAL 746
VF+AGRNRLENDGATALA+ F+ +G+LEE+ MPQNGI H GITAL
Sbjct: 181 ALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITAL 228
>BC041396-1|AAH41396.1| 587|Homo sapiens RANGAP1 protein protein.
Length = 587
Score = 198 bits (482), Expect = 2e-50
Identities = 111/228 (48%), Positives = 140/228 (61%), Gaps = 9/228 (3%)
Frame = +3
Query: 90 MATFDLNSLNTVLDEPAQPETGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNT 269
MA+ D+ L L + + F GKSLKL+TA+DA+ ++ I +L+ L L GNT
Sbjct: 1 MASEDIAKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNT 60
Query: 270 LGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLS 449
+GV AA+ I+KALE ELK +SDMFTGR++TEIPPAL +LG+G+I AGA+L LDLS
Sbjct: 61 VGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLS 120
Query: 450 DNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGG---------XXXXXXXXXXXX 602
DNAFGP GV+G LL+S C I GG
Sbjct: 121 DNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPL 180
Query: 603 XXXVFIAGRNRLENDGATALAKVFKEMGSLEEIAMPQNGIYHVGITAL 746
VF+AGRNRLENDGATALA+ F+ +G+LEE+ MPQNGI H GITAL
Sbjct: 181 ALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITAL 228
>BC014044-1|AAH14044.1| 587|Homo sapiens Ran GTPase activating
protein 1 protein.
Length = 587
Score = 198 bits (482), Expect = 2e-50
Identities = 111/228 (48%), Positives = 140/228 (61%), Gaps = 9/228 (3%)
Frame = +3
Query: 90 MATFDLNSLNTVLDEPAQPETGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNT 269
MA+ D+ L L + + F GKSLKL+TA+DA+ ++ I +L+ L L GNT
Sbjct: 1 MASEDIAKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNT 60
Query: 270 LGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLS 449
+GV AA+ I+KALE ELK +SDMFTGR++TEIPPAL +LG+G+I AGA+L LDLS
Sbjct: 61 VGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLS 120
Query: 450 DNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGG---------XXXXXXXXXXXX 602
DNAFGP GV+G LL+S C I GG
Sbjct: 121 DNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPL 180
Query: 603 XXXVFIAGRNRLENDGATALAKVFKEMGSLEEIAMPQNGIYHVGITAL 746
VF+AGRNRLENDGATALA+ F+ +G+LEE+ MPQNGI H GITAL
Sbjct: 181 ALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITAL 228
>AL035681-3|CAB63073.1| 587|Homo sapiens Ran GTPase activating
protein 1 protein.
Length = 587
Score = 198 bits (482), Expect = 2e-50
Identities = 111/228 (48%), Positives = 140/228 (61%), Gaps = 9/228 (3%)
Frame = +3
Query: 90 MATFDLNSLNTVLDEPAQPETGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNT 269
MA+ D+ L L + + F GKSLKL+TA+DA+ ++ I +L+ L L GNT
Sbjct: 1 MASEDIAKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNT 60
Query: 270 LGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLS 449
+GV AA+ I+KALE ELK +SDMFTGR++TEIPPAL +LG+G+I AGA+L LDLS
Sbjct: 61 VGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLS 120
Query: 450 DNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGG---------XXXXXXXXXXXX 602
DNAFGP GV+G LL+S C I GG
Sbjct: 121 DNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPL 180
Query: 603 XXXVFIAGRNRLENDGATALAKVFKEMGSLEEIAMPQNGIYHVGITAL 746
VF+AGRNRLENDGATALA+ F+ +G+LEE+ MPQNGI H GITAL
Sbjct: 181 ALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITAL 228
>AB058738-1|BAB47464.1| 623|Homo sapiens KIAA1835 protein protein.
Length = 623
Score = 198 bits (482), Expect = 2e-50
Identities = 111/228 (48%), Positives = 140/228 (61%), Gaps = 9/228 (3%)
Frame = +3
Query: 90 MATFDLNSLNTVLDEPAQPETGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNT 269
MA+ D+ L L + + F GKSLKL+TA+DA+ ++ I +L+ L L GNT
Sbjct: 37 MASEDIAKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDSLEALRLEGNT 96
Query: 270 LGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLS 449
+GV AA+ I+KALE ELK +SDMFTGR++TEIPPAL +LG+G+I AGA+L LDLS
Sbjct: 97 VGVEAARVIAKALEKKSELKRCHWSDMFTGRLRTEIPPALISLGEGLITAGAQLVELDLS 156
Query: 450 DNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGG---------XXXXXXXXXXXX 602
DNAFGP GV+G LL+S C I GG
Sbjct: 157 DNAFGPDGVQGFEALLKSSACFTLQELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPL 216
Query: 603 XXXVFIAGRNRLENDGATALAKVFKEMGSLEEIAMPQNGIYHVGITAL 746
VF+AGRNRLENDGATALA+ F+ +G+LEE+ MPQNGI H GITAL
Sbjct: 217 ALKVFVAGRNRLENDGATALAEAFRVIGTLEEVHMPQNGINHPGITAL 264
>AJ303140-1|CAC42117.1| 1013|Homo sapiens LRR-containing protein
protein.
Length = 1013
Score = 37.5 bits (83), Expect = 0.051
Identities = 31/106 (29%), Positives = 51/106 (48%)
Frame = +3
Query: 189 TAKDAQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMK 368
TA AQ++ + + +LQ+L GN +G AQA+++AL H L R+ + +
Sbjct: 857 TAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSL---RWLSLVGNNIG 913
Query: 369 TEIPPALSALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQSD 506
+ AL+ M+A L L L +N GV LA+ L+ +
Sbjct: 914 SVGAQALAL----MLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 955
>AF178930-1|AAG33677.1| 1040|Homo sapiens NOD2 protein protein.
Length = 1040
Score = 37.5 bits (83), Expect = 0.051
Identities = 31/106 (29%), Positives = 51/106 (48%)
Frame = +3
Query: 189 TAKDAQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMK 368
TA AQ++ + + +LQ+L GN +G AQA+++AL H L R+ + +
Sbjct: 884 TAAGAQVLAEGLRGNTSLQFLGFWGNRVGDEGAQALAEALGDHQSL---RWLSLVGNNIG 940
Query: 369 TEIPPALSALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQSD 506
+ AL+ M+A L L L +N GV LA+ L+ +
Sbjct: 941 SVGAQALAL----MLAKNVMLEELCLEENHLQDEGVCSLAEGLKKN 982
>EF452237-1|ABO40480.1| 975|Homo sapiens NOD5 protein.
Length = 975
Score = 33.9 bits (74), Expect = 0.62
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +3
Query: 204 QLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPP 383
+L+ +++ LQ L + N G TAA A+++A HP L++ ++ + +E
Sbjct: 825 ELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLH---LYFNELSSEGRQ 881
Query: 384 ALSALGDGMIAAGARLAV 437
L LG G GAR+ V
Sbjct: 882 VLRDLG-GAAEGGARVVV 898
>BC110890-1|AAI10891.1| 975|Homo sapiens NLRX1 protein protein.
Length = 975
Score = 33.9 bits (74), Expect = 0.62
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +3
Query: 204 QLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPP 383
+L+ +++ LQ L + N G TAA A+++A HP L++ ++ + +E
Sbjct: 825 ELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLH---LYFNELSSEGRQ 881
Query: 384 ALSALGDGMIAAGARLAV 437
L LG G GAR+ V
Sbjct: 882 VLRDLG-GAAEGGARVVV 898
>AY245437-1|AAP31240.1| 975|Homo sapiens NOD26 protein.
Length = 975
Score = 33.9 bits (74), Expect = 0.62
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +3
Query: 204 QLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPP 383
+L+ +++ LQ L + N G TAA A+++A HP L++ ++ + +E
Sbjct: 825 ELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLH---LYFNELSSEGRQ 881
Query: 384 ALSALGDGMIAAGARLAV 437
L LG G GAR+ V
Sbjct: 882 VLRDLG-GAAEGGARVVV 898
>AK025131-1|BAB15075.1| 554|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21478 fis, clone COL05012. ).
Length = 554
Score = 33.9 bits (74), Expect = 0.62
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +3
Query: 204 QLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPP 383
+L+ +++ LQ L + N G TAA A+++A HP L++ ++ + +E
Sbjct: 404 ELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLH---LYFNELSSEGRQ 460
Query: 384 ALSALGDGMIAAGARLAV 437
L LG G GAR+ V
Sbjct: 461 VLRDLG-GAAEGGARVVV 477
>AB094095-1|BAC76049.1| 975|Homo sapiens DLNB26 protein.
Length = 975
Score = 33.9 bits (74), Expect = 0.62
Identities = 23/78 (29%), Positives = 39/78 (50%)
Frame = +3
Query: 204 QLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPP 383
+L+ +++ LQ L + N G TAA A+++A HP L++ ++ + +E
Sbjct: 825 ELLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLH---LYFNELSSEGRQ 881
Query: 384 ALSALGDGMIAAGARLAV 437
L LG G GAR+ V
Sbjct: 882 VLRDLG-GAAEGGARVVV 898
>X86018-1|CAA60013.1| 617|Homo sapiens muf1 protein.
Length = 617
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 481 PSTPIGPNALSLRSSTAKRAPAAIMPSPKALK 386
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 110 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 141
>BX537366-1|CAD97609.1| 617|Homo sapiens hypothetical protein
protein.
Length = 617
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 481 PSTPIGPNALSLRSSTAKRAPAAIMPSPKALK 386
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 110 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 141
>BC101524-1|AAI01525.1| 812|Homo sapiens leucine rich repeat
containing 41 protein.
Length = 812
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 481 PSTPIGPNALSLRSSTAKRAPAAIMPSPKALK 386
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 358 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 389
>BC101522-1|AAI01523.1| 812|Homo sapiens leucine rich repeat
containing 41 protein.
Length = 812
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 481 PSTPIGPNALSLRSSTAKRAPAAIMPSPKALK 386
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 358 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 389
>BC092479-1|AAH92479.1| 668|Homo sapiens LRRC41 protein protein.
Length = 668
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 481 PSTPIGPNALSLRSSTAKRAPAAIMPSPKALK 386
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 309 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 340
>BC004953-1|AAH04953.2| 572|Homo sapiens LRRC41 protein protein.
Length = 572
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 481 PSTPIGPNALSLRSSTAKRAPAAIMPSPKALK 386
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 118 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 149
>AL122001-5|CAI21964.1| 812|Homo sapiens leucine rich repeat
containing 41 protein.
Length = 812
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 481 PSTPIGPNALSLRSSTAKRAPAAIMPSPKALK 386
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 358 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 389
>AL121602-2|CAI22118.1| 812|Homo sapiens leucine rich repeat
containing 41 protein.
Length = 812
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 481 PSTPIGPNALSLRSSTAKRAPAAIMPSPKALK 386
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 358 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 389
>AK223420-1|BAD97140.1| 614|Homo sapiens MUF1 protein variant
protein.
Length = 614
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 481 PSTPIGPNALSLRSSTAKRAPAAIMPSPKALK 386
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 160 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 191
>AK125827-1|BAC86308.1| 620|Homo sapiens protein ( Homo sapiens
cDNA FLJ43839 fis, clone TESTI4006079, highly similar
to Homo sapiens MUF1 protein (MUF1). ).
Length = 620
Score = 33.1 bits (72), Expect = 1.1
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = -1
Query: 481 PSTPIGPNALSLRSSTAKRAPAAIMPSPKALK 386
PS P ++ S +S+ KRAPA+ P PK LK
Sbjct: 248 PSAPAATSSASSSTSSYKRAPASSAPQPKPLK 279
>BC121160-1|AAI21161.1| 462|Homo sapiens chromosome 14 open reading
frame 166B protein.
Length = 462
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 222 INKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIAR 338
+N+C L YL + GN +G A ISK LES+ L++ +
Sbjct: 274 LNRC--LVYLDIGGNDIGNEGASKISKGLESNESLRVLK 310
>BC121159-1|AAI21160.1| 462|Homo sapiens chromosome 14 open reading
frame 166B protein.
Length = 462
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 222 INKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIAR 338
+N+C L YL + GN +G A ISK LES+ L++ +
Sbjct: 274 LNRC--LVYLDIGGNDIGNEGASKISKGLESNESLRVLK 310
>BC071866-1|AAH71866.1| 460|Homo sapiens LRFN4 protein protein.
Length = 460
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 171 KSLKLDTAKDAQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 335
+SL LD + +L ++ NLQ+L L+GN LG A A LES +L ++
Sbjct: 99 RSLHLDGNRLVELGTGSLRGPVNLQHLILSGNQLGRIAPGAFDDFLESLEDLDLS 153
>BC015581-1|AAH15581.2| 635|Homo sapiens leucine rich repeat and
fibronectin type III domain containing 4 protein.
Length = 635
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 171 KSLKLDTAKDAQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 335
+SL LD + +L ++ NLQ+L L+GN LG A A LES +L ++
Sbjct: 99 RSLHLDGNRLVELGTGSLRGPVNLQHLILSGNQLGRIAPGAFDDFLESLEDLDLS 153
>BC007718-1|AAH07718.1| 541|Homo sapiens LRFN4 protein protein.
Length = 541
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 171 KSLKLDTAKDAQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 335
+SL LD + +L ++ NLQ+L L+GN LG A A LES +L ++
Sbjct: 99 RSLHLDGNRLVELGTGSLRGPVNLQHLILSGNQLGRIAPGAFDDFLESLEDLDLS 153
>AY601811-1|AAT48367.1| 1065|Homo sapiens caterpiller 16.2 protein.
Length = 1065
Score = 32.7 bits (71), Expect = 1.4
Identities = 27/105 (25%), Positives = 51/105 (48%)
Frame = +3
Query: 192 AKDAQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKT 371
A AQ++ +A+ L+ L L GN +GV A+A++ AL+ + L+ + G M
Sbjct: 960 ASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLG-MDG 1018
Query: 372 EIPPALSALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQSD 506
I A + G+ RL ++L N G G +++ ++++
Sbjct: 1019 AICIATALSGN------HRLQHINLQGNHIGDSGARMISEAIKTN 1057
Score = 31.9 bits (69), Expect = 2.5
Identities = 31/117 (26%), Positives = 50/117 (42%)
Frame = +3
Query: 150 TGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELK 329
T +D G S+ AK + DA+ L L+L GNT+ A+++++AL S+ L
Sbjct: 697 TSLDLRGNSIGPQGAK---ALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 753
Query: 330 IARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQ 500
+ G P + D + L L S N+ G G + LA+ L+
Sbjct: 754 MLHLQKNSIG------PMGAQRMADA-LKQNRSLKELMFSSNSIGDGGAKALAEALK 803
>AK074109-1|BAB84935.1| 499|Homo sapiens FLJ00180 protein protein.
Length = 499
Score = 32.7 bits (71), Expect = 1.4
Identities = 27/105 (25%), Positives = 51/105 (48%)
Frame = +3
Query: 192 AKDAQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKT 371
A AQ++ +A+ L+ L L GN +GV A+A++ AL+ + L+ + G M
Sbjct: 394 ASGAQVLGEALAVNRTLEILDLRGNAIGVAGAKALANALKVNSSLRRLNLQENSLG-MDG 452
Query: 372 EIPPALSALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQSD 506
I A + G+ RL ++L N G G +++ ++++
Sbjct: 453 AICIATALSGN------HRLQHINLQGNHIGDSGARMISEAIKTN 491
Score = 31.9 bits (69), Expect = 2.5
Identities = 31/117 (26%), Positives = 50/117 (42%)
Frame = +3
Query: 150 TGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELK 329
T +D G S+ AK + DA+ L L+L GNT+ A+++++AL S+ L
Sbjct: 131 TSLDLRGNSIGPQGAK---ALADALKINRTLTSLSLQGNTVRDDGARSMAEALASNRTLS 187
Query: 330 IARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQ 500
+ G P + D + L L S N+ G G + LA+ L+
Sbjct: 188 MLHLQKNSIG------PMGAQRMADA-LKQNRSLKELMFSSNSIGDGGAKALAEALK 237
>AF111169-4|AAD44364.1| 608|Homo sapiens unknown protein.
Length = 608
Score = 32.7 bits (71), Expect = 1.4
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 222 INKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIAR 338
+N+C L YL + GN +G A ISK LES+ L++ +
Sbjct: 242 LNRC--LVYLDIGGNDIGNEGASKISKGLESNESLRVLK 278
>AB209005-1|BAD92242.1| 622|Homo sapiens leucine rich repeat and
fibronectin type III domain containing 4 variant
protein.
Length = 622
Score = 32.7 bits (71), Expect = 1.4
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +3
Query: 171 KSLKLDTAKDAQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIA 335
+SL LD + +L ++ NLQ+L L+GN LG A A LES +L ++
Sbjct: 86 RSLHLDGNRLVELGTGSLRGPVNLQHLILSGNQLGRIAPGAFDDFLESLEDLDLS 140
>AL160037-1|CAH72024.1| 1371|Homo sapiens leucine rich repeat
containing 16 protein.
Length = 1371
Score = 32.3 bits (70), Expect = 1.9
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Frame = +3
Query: 150 TGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALES----- 314
T +D S L+ D + LIV ++K ++Q+LAL G ++ ++ L++
Sbjct: 485 TSLDISDNGLESDLST---LIV-WLSKNRSIQHLAL-GKNFNNMKSKNLTPVLDNLVQMI 539
Query: 315 HPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKL 494
E + + ++KTE+ ++ALG + L +D+S N G +G + LAK
Sbjct: 540 QDEESPLQSLSLADSKLKTEVTIIINALG-----SNTSLTKVDISGNGMGDMGAKMLAKA 594
Query: 495 LQ 500
LQ
Sbjct: 595 LQ 596
Score = 30.3 bits (65), Expect = 7.7
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +3
Query: 111 SLNTVLDEPAQPETGVDFSGKSLKLDTAK---DAQLIVDAINKCPNLQYLALTGNTLGVT 281
+L VLD Q + +SL L +K + +I++A+ +L + ++GN +G
Sbjct: 527 NLTPVLDNLVQMIQDEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNGMGDM 586
Query: 282 AAQAISKALESHPELK 329
A+ ++KAL+ + +L+
Sbjct: 587 GAKMLAKALQINTKLR 602
>AL024509-3|CAI21665.1| 1371|Homo sapiens leucine rich repeat
containing 16 protein.
Length = 1371
Score = 32.3 bits (70), Expect = 1.9
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Frame = +3
Query: 150 TGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALES----- 314
T +D S L+ D + LIV ++K ++Q+LAL G ++ ++ L++
Sbjct: 485 TSLDISDNGLESDLST---LIV-WLSKNRSIQHLAL-GKNFNNMKSKNLTPVLDNLVQMI 539
Query: 315 HPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKL 494
E + + ++KTE+ ++ALG + L +D+S N G +G + LAK
Sbjct: 540 QDEESPLQSLSLADSKLKTEVTIIINALG-----SNTSLTKVDISGNGMGDMGAKMLAKA 594
Query: 495 LQ 500
LQ
Sbjct: 595 LQ 596
Score = 30.3 bits (65), Expect = 7.7
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +3
Query: 111 SLNTVLDEPAQPETGVDFSGKSLKLDTAK---DAQLIVDAINKCPNLQYLALTGNTLGVT 281
+L VLD Q + +SL L +K + +I++A+ +L + ++GN +G
Sbjct: 527 NLTPVLDNLVQMIQDEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNGMGDM 586
Query: 282 AAQAISKALESHPELK 329
A+ ++KAL+ + +L+
Sbjct: 587 GAKMLAKALQINTKLR 602
>AL022170-1|CAI21583.1| 1371|Homo sapiens leucine rich repeat
containing 16 protein.
Length = 1371
Score = 32.3 bits (70), Expect = 1.9
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 5/122 (4%)
Frame = +3
Query: 150 TGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALES----- 314
T +D S L+ D + LIV ++K ++Q+LAL G ++ ++ L++
Sbjct: 485 TSLDISDNGLESDLST---LIV-WLSKNRSIQHLAL-GKNFNNMKSKNLTPVLDNLVQMI 539
Query: 315 HPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKL 494
E + + ++KTE+ ++ALG + L +D+S N G +G + LAK
Sbjct: 540 QDEESPLQSLSLADSKLKTEVTIIINALG-----SNTSLTKVDISGNGMGDMGAKMLAKA 594
Query: 495 LQ 500
LQ
Sbjct: 595 LQ 596
Score = 30.3 bits (65), Expect = 7.7
Identities = 20/76 (26%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +3
Query: 111 SLNTVLDEPAQPETGVDFSGKSLKLDTAK---DAQLIVDAINKCPNLQYLALTGNTLGVT 281
+L VLD Q + +SL L +K + +I++A+ +L + ++GN +G
Sbjct: 527 NLTPVLDNLVQMIQDEESPLQSLSLADSKLKTEVTIIINALGSNTSLTKVDISGNGMGDM 586
Query: 282 AAQAISKALESHPELK 329
A+ ++KAL+ + +L+
Sbjct: 587 GAKMLAKALQINTKLR 602
>AY051117-1|AAL12497.1| 1034|Homo sapiens cryopyrin protein.
Length = 1034
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/102 (25%), Positives = 47/102 (46%)
Frame = +3
Query: 210 IVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPAL 389
+ ++ +L L L+ N+LG + + + L+ HP I R ++ GR
Sbjct: 731 LFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ-HPGCNIRR---LWLGRCGLSHECCF 786
Query: 390 SALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQSDVCS 515
++++ +L LDLSDNA G G+ L L+ +C+
Sbjct: 787 DI--SLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN 826
>AL606804-10|CAI17153.1| 1036|Homo sapiens NLR family, pyrin domain
containing 3 protein.
Length = 1036
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/102 (25%), Positives = 47/102 (46%)
Frame = +3
Query: 210 IVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPAL 389
+ ++ +L L L+ N+LG + + + L+ HP I R ++ GR
Sbjct: 733 LFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ-HPGCNIRR---LWLGRCGLSHECCF 788
Query: 390 SALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQSDVCS 515
++++ +L LDLSDNA G G+ L L+ +C+
Sbjct: 789 DI--SLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN 828
>AF468522-1|AAL78632.1| 1036|Homo sapiens NALP3 long isoform protein.
Length = 1036
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/102 (25%), Positives = 47/102 (46%)
Frame = +3
Query: 210 IVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPAL 389
+ ++ +L L L+ N+LG + + + L+ HP I R ++ GR
Sbjct: 733 LFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ-HPGCNIRR---LWLGRCGLSHECCF 788
Query: 390 SALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQSDVCS 515
++++ +L LDLSDNA G G+ L L+ +C+
Sbjct: 789 DI--SLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN 828
>AF420469-1|AAL65136.1| 1034|Homo sapiens PYRIN-containing APAF1-like
protein 1 protein.
Length = 1034
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/102 (25%), Positives = 47/102 (46%)
Frame = +3
Query: 210 IVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPAL 389
+ ++ +L L L+ N+LG + + + L+ HP I R ++ GR
Sbjct: 731 LFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ-HPGCNIRR---LWLGRCGLSHECCF 786
Query: 390 SALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQSDVCS 515
++++ +L LDLSDNA G G+ L L+ +C+
Sbjct: 787 DI--SLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN 826
>AF410477-1|AAL33908.1| 1034|Homo sapiens cryopyrin protein.
Length = 1034
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/102 (25%), Positives = 47/102 (46%)
Frame = +3
Query: 210 IVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPAL 389
+ ++ +L L L+ N+LG + + + L+ HP I R ++ GR
Sbjct: 731 LFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ-HPGCNIRR---LWLGRCGLSHECCF 786
Query: 390 SALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQSDVCS 515
++++ +L LDLSDNA G G+ L L+ +C+
Sbjct: 787 DI--SLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN 826
>AB208891-1|BAD92128.1| 983|Homo sapiens Cryopyrin deletion 4 isoform
variant protein.
Length = 983
Score = 31.9 bits (69), Expect = 2.5
Identities = 26/102 (25%), Positives = 47/102 (46%)
Frame = +3
Query: 210 IVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPAL 389
+ ++ +L L L+ N+LG + + + L+ HP I R ++ GR
Sbjct: 737 LFSVLSTSQSLTELDLSDNSLGDPGMRVLCETLQ-HPGCNIRR---LWLGRCGLSHECCF 792
Query: 390 SALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQSDVCS 515
++++ +L LDLSDNA G G+ L L+ +C+
Sbjct: 793 DI--SLVLSSNQKLVELDLSDNALGDFGIRLLCVGLKHLLCN 832
>AB113647-1|BAD26751.1| 1475|Homo sapiens RGD, leucine-rich repeat,
tropomodulin and proline-rich containing protein
protein.
Length = 1475
Score = 30.7 bits (66), Expect = 5.8
Identities = 14/43 (32%), Positives = 26/43 (60%)
Frame = +3
Query: 201 AQLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELK 329
A +++ A+ PNL L ++GN +G A+ ++KAL + L+
Sbjct: 638 ASVLLRALATNPNLTALDISGNAMGDAGAKLLAKALRVNSRLR 680
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,114,419
Number of Sequences: 237096
Number of extensions: 2295820
Number of successful extensions: 5304
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 5052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5296
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8959138240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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