Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12d02
(748 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY061219-1|AAL28767.1| 596|Drosophila melanogaster LD16356p pro... 163 2e-40
AE014134-3098|AAF53801.1| 596|Drosophila melanogaster CG9999-PA... 163 2e-40
AF143860-1|AAD31518.1| 596|Drosophila melanogaster RanGAP protein. 161 7e-40
AY058675-1|AAL13904.1| 772|Drosophila melanogaster LD38495p pro... 31 2.2
AE014297-2112|AAF55252.2| 772|Drosophila melanogaster CG4221-PA... 31 2.2
AE014298-2781|AAF48895.2| 1868|Drosophila melanogaster CG7282-PA... 30 3.9
AE013599-481|AAF59205.2| 1399|Drosophila melanogaster CG1399-PB,... 29 8.9
>AY061219-1|AAL28767.1| 596|Drosophila melanogaster LD16356p
protein.
Length = 596
Score = 163 bits (396), Expect = 2e-40
Identities = 97/228 (42%), Positives = 126/228 (55%), Gaps = 9/228 (3%)
Frame = +3
Query: 90 MATFDLNSLNTVLDEPAQPETGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNT 269
M+TF+ S+ L + E G+ F K L +TA D Q +VDA+NK + YL L GNT
Sbjct: 1 MSTFNFASMAAQLGQ----EQGISFENKVLSWNTAADVQDVVDALNKQTTVHYLNLDGNT 56
Query: 270 LGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLS 449
LGV AA+AI + L+ HPE + A + +MFTGR+ +EIP AL LG +I AGA+L VLDLS
Sbjct: 57 LGVEAAKAIGEGLKRHPEFRKALWKNMFTGRLISEIPEALKHLGAALIVAGAKLTVLDLS 116
Query: 450 DNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGG---------XXXXXXXXXXXX 602
DNA GP G+ GL +LL+S VC GG
Sbjct: 117 DNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPL 176
Query: 603 XXXVFIAGRNRLENDGATALAKVFKEMGSLEEIAMPQNGIYHVGITAL 746
VFI RNRLE+ GAT +A F+ + + EEI + QN IY G+ AL
Sbjct: 177 QLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEAL 224
Score = 30.3 bits (65), Expect = 2.9
Identities = 24/90 (26%), Positives = 39/90 (43%)
Frame = +3
Query: 204 QLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPP 383
+ + ++ P+L+ L + NTL A+ I++AL P L+ F D +KT
Sbjct: 222 EALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCL---IKTN--- 275
Query: 384 ALSALGDGMIAAGARLAVLDLSDNAFGPIG 473
G+ + RL V+DL N G
Sbjct: 276 GAYHFGEALERGNERLEVIDLGFNEINSDG 305
>AE014134-3098|AAF53801.1| 596|Drosophila melanogaster CG9999-PA
protein.
Length = 596
Score = 163 bits (396), Expect = 2e-40
Identities = 97/228 (42%), Positives = 126/228 (55%), Gaps = 9/228 (3%)
Frame = +3
Query: 90 MATFDLNSLNTVLDEPAQPETGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNT 269
M+TF+ S+ L + E G+ F K L +TA D Q +VDA+NK + YL L GNT
Sbjct: 1 MSTFNFASMAAQLGQ----EQGISFENKVLSWNTAADVQDVVDALNKQTTVHYLNLDGNT 56
Query: 270 LGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLS 449
LGV AA+AI + L+ HPE + A + +MFTGR+ +EIP AL LG +I AGA+L VLDLS
Sbjct: 57 LGVEAAKAIGEGLKRHPEFRKALWKNMFTGRLISEIPEALKHLGAALIVAGAKLTVLDLS 116
Query: 450 DNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGG---------XXXXXXXXXXXX 602
DNA GP G+ GL +LL+S VC GG
Sbjct: 117 DNALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPL 176
Query: 603 XXXVFIAGRNRLENDGATALAKVFKEMGSLEEIAMPQNGIYHVGITAL 746
VFI RNRLE+ GAT +A F+ + + EEI + QN IY G+ AL
Sbjct: 177 QLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEAL 224
Score = 30.3 bits (65), Expect = 2.9
Identities = 24/90 (26%), Positives = 39/90 (43%)
Frame = +3
Query: 204 QLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPP 383
+ + ++ P+L+ L + NTL A+ I++AL P L+ F D +KT
Sbjct: 222 EALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCL---IKTN--- 275
Query: 384 ALSALGDGMIAAGARLAVLDLSDNAFGPIG 473
G+ + RL V+DL N G
Sbjct: 276 GAYHFGEALERGNERLEVIDLGFNEINSDG 305
>AF143860-1|AAD31518.1| 596|Drosophila melanogaster RanGAP protein.
Length = 596
Score = 161 bits (392), Expect = 7e-40
Identities = 96/228 (42%), Positives = 126/228 (55%), Gaps = 9/228 (3%)
Frame = +3
Query: 90 MATFDLNSLNTVLDEPAQPETGVDFSGKSLKLDTAKDAQLIVDAINKCPNLQYLALTGNT 269
M+TF+ S+ L + E G+ F K L +TA D Q +VDA+NK + YL L GNT
Sbjct: 1 MSTFNFASMAAQLGQ----EQGISFENKVLSWNTAADVQDVVDALNKQTTVHYLNLDGNT 56
Query: 270 LGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPPALSALGDGMIAAGARLAVLDLS 449
LGV AA+AI + L+ HPE + A + +MFTGR+ +EIP AL LG +I AGA+L VLDLS
Sbjct: 57 LGVEAAKAIGEGLKRHPEFRKALWKNMFTGRLISEIPEALKHLGAALIVAGAKLTVLDLS 116
Query: 450 DNAFGPIGVEGLAKLLQSDVCSDXXXXXXXXXXXXITGG---------XXXXXXXXXXXX 602
+NA GP G+ GL +LL+S VC GG
Sbjct: 117 ENALGPNGMRGLEELLRSPVCYSLQELLLCNCGLGPEGGSMLSRALIDLHANANKAGFPL 176
Query: 603 XXXVFIAGRNRLENDGATALAKVFKEMGSLEEIAMPQNGIYHVGITAL 746
VFI RNRLE+ GAT +A F+ + + EEI + QN IY G+ AL
Sbjct: 177 QLRVFIGSRNRLEDAGATEMATAFQTLKTFEEIVLEQNSIYIEGVEAL 224
Score = 30.3 bits (65), Expect = 2.9
Identities = 24/90 (26%), Positives = 39/90 (43%)
Frame = +3
Query: 204 QLIVDAINKCPNLQYLALTGNTLGVTAAQAISKALESHPELKIARFSDMFTGRMKTEIPP 383
+ + ++ P+L+ L + NTL A+ I++AL P L+ F D +KT
Sbjct: 222 EALAESFKHNPHLRVLNMNDNTLKSEGAEKIAEALPFLPLLREMSFGDCL---IKTN--- 275
Query: 384 ALSALGDGMIAAGARLAVLDLSDNAFGPIG 473
G+ + RL V+DL N G
Sbjct: 276 GAYHFGEALERGNERLEVIDLGFNEINSDG 305
>AY058675-1|AAL13904.1| 772|Drosophila melanogaster LD38495p
protein.
Length = 772
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 177 LKLDTAKDA--QLIVDAINKCPNLQYLALTG 263
L+L T D Q +V+A+ KC NLQ+L +TG
Sbjct: 505 LQLQTCVDITNQALVEALTKCSNLQHLDVTG 535
>AE014297-2112|AAF55252.2| 772|Drosophila melanogaster CG4221-PA
protein.
Length = 772
Score = 30.7 bits (66), Expect = 2.2
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Frame = +3
Query: 177 LKLDTAKDA--QLIVDAINKCPNLQYLALTG 263
L+L T D Q +V+A+ KC NLQ+L +TG
Sbjct: 505 LQLQTCVDITNQALVEALTKCSNLQHLDVTG 535
>AE014298-2781|AAF48895.2| 1868|Drosophila melanogaster CG7282-PA
protein.
Length = 1868
Score = 29.9 bits (64), Expect = 3.9
Identities = 17/41 (41%), Positives = 22/41 (53%)
Frame = -1
Query: 493 SLARPSTPIGPNALSLRSSTAKRAPAAIMPSPKALKAGGIS 371
++ + TP+G ALSL SSTA P A P+ A G S
Sbjct: 1230 AIQQRKTPVG-GALSLASSTAGTPPTAHTPNSTATAGAGFS 1269
>AE013599-481|AAF59205.2| 1399|Drosophila melanogaster CG1399-PB,
isoform B protein.
Length = 1399
Score = 28.7 bits (61), Expect = 8.9
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 6/111 (5%)
Frame = +3
Query: 186 DTAKDAQL--IVDAINKCPNLQYLALTGNTLGVTAAQA--ISKALESHPELKIARFSDMF 353
D DA+L ++ AI+K P+++ L LT + G+ + AL + + ++
Sbjct: 464 DNNLDAELAPVLTAISKNPSIRTLHLTRSLTGMKPKHIPPVMDALVNLIQKDDFPLVELV 523
Query: 354 TG--RMKTEIPPALSALGDGMIAAGARLAVLDLSDNAFGPIGVEGLAKLLQ 500
++K ++ ++ALG L LD+S N G +G LAK LQ
Sbjct: 524 LSENKLKHDLHDFINALGSNQ-----SLQKLDISGNFMGDVGARLLAKALQ 569
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,794,190
Number of Sequences: 53049
Number of extensions: 685608
Number of successful extensions: 1870
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1870
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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