Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12d01
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    23   2.4  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   9.8  
AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory recept...    21   9.8  
AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory recept...    21   9.8  

>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 153 FQCNKYCNYVSRPLLNRFNTIFSNF 79
           F CN +  +    + N   T+F+NF
Sbjct: 443 FICNSFTKFEFNTVFNDQRTVFANF 467


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 7/9 (77%), Positives = 8/9 (88%)
 Frame = -3

Query: 508 NVLERGLFC 482
           N +ERGLFC
Sbjct: 128 NCIERGLFC 136


>AM292339-1|CAL23151.2|  387|Tribolium castaneum gustatory receptor
           candidate 18 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 13  SRKVVKVAVLLTFFQNLMF 69
           +R + + +VLL F  +LMF
Sbjct: 125 NRHIFRTSVLLIFVMHLMF 143


>AM292338-1|CAL23150.2|  372|Tribolium castaneum gustatory receptor
           candidate 17 protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 13  SRKVVKVAVLLTFFQNLMF 69
           +R + + +VLL F  +LMF
Sbjct: 125 NRHIFRTSVLLIFVMHLMF 143


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,751
Number of Sequences: 336
Number of extensions: 2987
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)