Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12c23
(682 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z34276-1|CAA84030.1| 94|Homo sapiens mucin protein. 34 0.54
AJ298319-1|CAC83676.1| 372|Homo sapiens mucin 5 protein. 33 0.94
Z34281-1|CAA84035.1| 62|Homo sapiens mucin protein. 33 1.2
AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein. 33 1.2
BC070110-1|AAH70110.1| 855|Homo sapiens chromosome X open readi... 32 2.2
BC033709-1|AAH33709.1| 855|Homo sapiens chromosome X open readi... 32 2.2
BC011483-1|AAH11483.1| 855|Homo sapiens chromosome X open readi... 32 2.2
AL606833-4|CAI41231.1| 566|Homo sapiens novel protein protein. 32 2.2
AL606833-3|CAI41230.1| 855|Homo sapiens novel protein protein. 32 2.2
AL590808-3|CAI41596.1| 566|Homo sapiens novel protein protein. 32 2.2
AL590808-2|CAI41594.1| 855|Homo sapiens novel protein protein. 32 2.2
AK024253-1|BAB14859.1| 533|Homo sapiens protein. 32 2.2
Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein. 30 6.6
X74955-1|CAA52910.1| 622|Homo sapiens mucin protein. 30 6.6
L46721-1|AAC41774.1| 164|Homo sapiens mucin protein. 30 6.6
Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein. 30 8.8
>Z34276-1|CAA84030.1| 94|Homo sapiens mucin protein.
Length = 94
Score = 33.9 bits (74), Expect = 0.54
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +3
Query: 504 IPSTSTGGFTTTHQSTIVDKQTTAGPSINPQ-TTAGSAINPPTTAGPSASS 653
+P+TST +TT ++ TT+GP P S + PTT+ SAS+
Sbjct: 39 VPTTSTTSASTTSTTSASTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSAST 89
>AJ298319-1|CAC83676.1| 372|Homo sapiens mucin 5 protein.
Length = 372
Score = 33.1 bits (72), Expect = 0.94
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 504 IPSTSTGGFTTTHQSTIVDKQTTAGPSINPQ-TTAGSAINPPTTAGPSASS 653
+P+TST TT ++ TT+GP P S + PTT+ SAS+
Sbjct: 63 VPTTSTTSAPTTSTTSASTASTTSGPGTTPSPVPTTSTTSAPTTSTTSAST 113
Score = 32.3 bits (70), Expect = 1.6
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
Frame = +3
Query: 504 IPSTSTGGFTTTHQSTIVDKQTTAGPSIN----PQTTAGSAINPPTTAGPSAS 650
+P+TST TT ++ TT+GP + P T+ SA TT+GP +
Sbjct: 95 VPTTSTTSAPTTSTTSASTASTTSGPGTSLSPVPTTSTTSAPTTSTTSGPGTT 147
>Z34281-1|CAA84035.1| 62|Homo sapiens mucin protein.
Length = 62
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 507 PSTSTGGFTTTHQSTIVDKQTTAGPSIN----PQTTAGSAINPPTTAGPSASS 653
P TST TT ++ TT+ P+ + PQT+ SA TT+ P+AS+
Sbjct: 3 PQTSTTSSPTTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTAST 55
>AJ298318-1|CAC83675.1| 1349|Homo sapiens mucin 5 protein.
Length = 1349
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 507 PSTSTGGFTTTHQSTIVDKQTTAGPSIN----PQTTAGSAINPPTTAGPSASS 653
P TST TT ++ TT+ P+ + PQT+ SA TT+ P+AS+
Sbjct: 795 PQTSTTSSPTTSTTSAPTTSTTSAPTTSTTSTPQTSISSAPTSSTTSAPTAST 847
Score = 31.5 bits (68), Expect = 2.9
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +3
Query: 504 IPSTSTGGFTTTHQSTIVDKQTTAGPSIN----PQTTAGSAINPPTTAGPSASSDIA 662
+P+TST +TT ++ TT+GP P T+ SA TT+ P+ + A
Sbjct: 1204 VPTTSTTSASTTSTTSAPTTSTTSGPGTTPSPVPSTSITSAATTSTTSAPTTRTTSA 1260
>BC070110-1|AAH70110.1| 855|Homo sapiens chromosome X open reading
frame 57 protein.
Length = 855
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 243 LGLSHRLALDITLNPSYCPWD 181
LGL+H +A+D+ P YCP D
Sbjct: 756 LGLNHEIAIDVAFLPMYCPED 776
>BC033709-1|AAH33709.1| 855|Homo sapiens chromosome X open reading
frame 57 protein.
Length = 855
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 243 LGLSHRLALDITLNPSYCPWD 181
LGL+H +A+D+ P YCP D
Sbjct: 756 LGLNHEIAIDVAFLPMYCPED 776
>BC011483-1|AAH11483.1| 855|Homo sapiens chromosome X open reading
frame 57 protein.
Length = 855
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 243 LGLSHRLALDITLNPSYCPWD 181
LGL+H +A+D+ P YCP D
Sbjct: 756 LGLNHEIAIDVAFLPMYCPED 776
>AL606833-4|CAI41231.1| 566|Homo sapiens novel protein protein.
Length = 566
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 243 LGLSHRLALDITLNPSYCPWD 181
LGL+H +A+D+ P YCP D
Sbjct: 467 LGLNHEIAIDVAFLPMYCPED 487
>AL606833-3|CAI41230.1| 855|Homo sapiens novel protein protein.
Length = 855
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 243 LGLSHRLALDITLNPSYCPWD 181
LGL+H +A+D+ P YCP D
Sbjct: 756 LGLNHEIAIDVAFLPMYCPED 776
>AL590808-3|CAI41596.1| 566|Homo sapiens novel protein protein.
Length = 566
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 243 LGLSHRLALDITLNPSYCPWD 181
LGL+H +A+D+ P YCP D
Sbjct: 467 LGLNHEIAIDVAFLPMYCPED 487
>AL590808-2|CAI41594.1| 855|Homo sapiens novel protein protein.
Length = 855
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 243 LGLSHRLALDITLNPSYCPWD 181
LGL+H +A+D+ P YCP D
Sbjct: 756 LGLNHEIAIDVAFLPMYCPED 776
>AK024253-1|BAB14859.1| 533|Homo sapiens protein.
Length = 533
Score = 31.9 bits (69), Expect = 2.2
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -2
Query: 243 LGLSHRLALDITLNPSYCPWD 181
LGL+H +A+D+ P YCP D
Sbjct: 434 LGLNHEIAIDVAFLPMYCPED 454
>Z72496-1|CAA96577.1| 3570|Homo sapiens mucin MUC5B protein.
Length = 3570
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Frame = +3
Query: 504 IPSTSTGGFTTTHQST-------IVDKQTTAGPSINPQTTAGSAINPPTTAGPSASSDI 659
+P+T+T GFT T S+ V TT P+ TT+GS + P + G + ++ +
Sbjct: 3209 VPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARV 3267
>X74955-1|CAA52910.1| 622|Homo sapiens mucin protein.
Length = 622
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Frame = +3
Query: 504 IPSTSTGGFTTTHQST-------IVDKQTTAGPSINPQTTAGSAINPPTTAGPSASSDI 659
+P+T+T GFT T S+ V TT P+ TT+GS + P + G + ++ +
Sbjct: 424 VPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTTTPTTSGSTVTPSSIPGTTHTARV 482
>L46721-1|AAC41774.1| 164|Homo sapiens mucin protein.
Length = 164
Score = 30.3 bits (65), Expect = 6.6
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Frame = +3
Query: 504 IPSTSTGGFTTTHQSTIVDKQTTAGPSINPQ----TTAGSAINPPTTAGPSASSDIA 662
+P+TS+ TT ++ TT+GP P T+ SA TT+ P+ S+ A
Sbjct: 10 VPTTSSISVLTTSTTSASTTSTTSGPGTTPSPVPTTSTTSAPTTSTTSAPTTSTTSA 66
>Z34278-1|CAA84032.1| 279|Homo sapiens mucin protein.
Length = 279
Score = 29.9 bits (64), Expect = 8.8
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +3
Query: 504 IPSTSTGGFTTTHQSTIVDKQTTAGPSINPQ-TTAGSAINPPTTA 635
+P+TST +TT ++ TT+GP P S + PTT+
Sbjct: 235 VPTTSTTSASTTSTTSASTTSTTSGPGTTPSPVPTTSTTSAPTTS 279
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 86,956,695
Number of Sequences: 237096
Number of extensions: 1652187
Number of successful extensions: 3981
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3968
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7727256732
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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