Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12c23
(682 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 38 0.009
AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical ... 35 0.047
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 34 0.11
AC024776-3|AAK68466.1| 453|Caenorhabditis elegans Hypothetical ... 33 0.14
Z81491-12|CAI46569.1| 177|Caenorhabditis elegans Hypothetical p... 33 0.25
U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 1.0
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 31 1.0
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 31 1.0
Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical pr... 30 1.8
U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical pr... 30 1.8
U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical pr... 30 1.8
AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical ... 30 1.8
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 29 2.3
U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical pr... 29 2.3
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 2.3
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical... 29 2.3
AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical ... 29 3.1
AF026204-3|AAB71253.1| 424|Caenorhabditis elegans Hypothetical ... 29 3.1
Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical pr... 29 4.1
U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical p... 29 4.1
U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical p... 29 4.1
U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical pr... 29 4.1
U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein signa... 29 4.1
AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical ... 29 4.1
AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical ... 29 4.1
Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical pr... 28 5.4
U42013-1|AAB06496.1| 415|Caenorhabditis elegans UNC-24 protein. 28 5.4
AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein. 28 5.4
AF045644-5|AAC02604.1| 415|Caenorhabditis elegans Uncoordinated... 28 5.4
AC006708-14|AAT81172.1| 273|Caenorhabditis elegans Metaphase-to... 28 5.4
AC006708-13|AAF60415.1| 788|Caenorhabditis elegans Metaphase-to... 28 5.4
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 7.1
U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore co... 28 7.1
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 28 7.1
U23486-2|AAL38957.1| 318|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF125459-12|AAD12832.1| 533|Caenorhabditis elegans Hypothetical... 28 7.1
Z93389-2|CAB07671.2| 355|Caenorhabditis elegans Hypothetical pr... 27 9.4
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 27 9.4
AF125459-13|AAD12833.1| 605|Caenorhabditis elegans Hypothetical... 27 9.4
AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical ... 27 9.4
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 37.5 bits (83), Expect = 0.009
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 510 STSTGGFTTTH--QSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASS 653
ST+ G TT+ QST T++GPS ++T + P TT+GPS +S
Sbjct: 538 STTPGASTTSGSTQSTTSGPSTSSGPSTASRSTVSTTSGPSTTSGPSTTS 587
Score = 37.1 bits (82), Expect = 0.012
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +3
Query: 510 STSTGGFTTTHQSTIVD--KQTTAGPSINPQTTAGSAINPPTTAGPSASS 653
S ++G TT+ ST + + TT+GPS P +T + + TT+GPS SS
Sbjct: 430 SDTSGPSTTSGPSTTLGTTQSTTSGPSTTPGSTISTTSSASTTSGPSTSS 479
Score = 34.3 bits (75), Expect = 0.082
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Frame = +3
Query: 510 STSTGGFTT--THQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASS 653
ST++G T+ T +ST T++GPS + T + P TT+GPS +S
Sbjct: 484 STTSGQSTSSGTTKSTTSGPTTSSGPSTVSERTLSTTSGPSTTSGPSTTS 533
Score = 33.5 bits (73), Expect = 0.14
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
Frame = +3
Query: 492 SLAVIPSTSTGGFTTTHQSTI--VDKQTTAGPSIN--PQTTAGSAIN----PPTTAGPSA 647
SL S + TT STI + + TT+GP+ P TT+GS ++ P TT+GPS
Sbjct: 384 SLGSSQSPGSSVSTTPGPSTISGISQSTTSGPTTTSEPSTTSGSTVSDTSGPSTTSGPST 443
Query: 648 S 650
+
Sbjct: 444 T 444
Score = 32.3 bits (70), Expect = 0.33
Identities = 17/49 (34%), Positives = 29/49 (59%)
Frame = +3
Query: 510 STSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASSD 656
+++T G +T+ ST+ TT+G S + TT + P T++GPS S+
Sbjct: 469 ASTTSGPSTSSGSTV---STTSGQSTSSGTTKSTTSGPTTSSGPSTVSE 514
Score = 32.3 bits (70), Expect = 0.33
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 8/57 (14%)
Frame = +3
Query: 507 PSTSTGGFTTTHQ--STIVDKQTTAGPSIN--PQTTAGSAIN----PPTTAGPSASS 653
PSTS+G T + ST TT+GPS P TT+GS + P TT+G + S+
Sbjct: 557 PSTSSGPSTASRSTVSTTSGPSTTSGPSTTSGPSTTSGSTKSTTSGPSTTSGKNIST 613
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = +3
Query: 507 PSTSTGGFTTTHQ--STIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASS 653
P+TS+G T + + ST TT+GPS +T + TT+G + S+
Sbjct: 503 PTTSSGPSTVSERTLSTTSGPSTTSGPSTTSGSTVSTTPGASTTSGSTQST 553
Score = 27.5 bits (58), Expect = 9.4
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Frame = +3
Query: 507 PSTSTGG--FTTTHQSTIVDKQTTAGPSINPQT--TAGSAINPPTTAGPSASS 653
PST+ G TT+ ST T++G +++ + + S TT+GP+ SS
Sbjct: 455 PSTTPGSTISTTSSASTTSGPSTSSGSTVSTTSGQSTSSGTTKSTTSGPTTSS 507
>AC024880-1|AAR12985.1| 634|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2b protein.
Length = 634
Score = 35.1 bits (77), Expect = 0.047
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = +3
Query: 405 TSKQRKSAAEYQREYQARK---KAKRDNILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTA 575
T ++ + E +E+ RK K+ + + +D IPST+T TTT +T ++ TT
Sbjct: 72 TKQESEEDDETWKEHTRRKGKGKSAEEKVHVDP-TTIPSTTTSSTTTTTTTTTTEEPTTT 130
Query: 576 GPSINPQTTAGSAINPPTTAGPSASS 653
I TT+ S T A++
Sbjct: 131 TSPIATTTTSTSTTTTETPTTSEATT 156
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 33.9 bits (74), Expect = 0.11
Identities = 26/92 (28%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Frame = +3
Query: 387 NVAGSVTSKQRKSAAEYQREYQARKKAKRDNILIDSLAVIPSTSTGGFTTTHQSTIVDKQ 566
+ GS+TS Q+ ++ A + + + S PST+TG T QS+ V
Sbjct: 806 STTGSITSTQQATSTSSVIT-TGSTSAPQSSTAVSSTTTSPSTTTGS-TPAPQSSTVAST 863
Query: 567 TTAGPSINPQ---TTAGSAINPPTTAGPSASS 653
TT P + TT + TT G ++SS
Sbjct: 864 TTVSPYTTTECICTTVSNTFGTSTTQGLTSSS 895
Score = 33.5 bits (73), Expect = 0.14
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = +3
Query: 510 STSTGGFTTTHQSTIVDKQTTAGPSINPQT--TAGSAINPPTTAGPSASS 653
+TS+G TT ST+ QT+ S P T T + NP T++ S SS
Sbjct: 1523 ATSSGSSTTVGSSTVGATQTSVSSSTVPNTGSTGSTVTNPSTSSSTSGSS 1572
Score = 28.7 bits (61), Expect = 4.1
Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +3
Query: 510 STSTGGFTTTHQSTIVDKQTTAGPSINPQTT---AGSAINPPTTAG 638
+++TG T+T Q+T T G + PQ++ + + +P TT G
Sbjct: 805 ASTTGSITSTQQATSTSSVITTGSTSAPQSSTAVSSTTTSPSTTTG 850
>AC024776-3|AAK68466.1| 453|Caenorhabditis elegans Hypothetical
protein Y41D4B.16 protein.
Length = 453
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +3
Query: 507 PSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASSDI 659
P+T++ ++T + + T+ + P TTAG++ N P T P+ S I
Sbjct: 365 PTTTSAALSSTASTPSIASTATSAATNPPTTTAGASTNSPATNPPTTSRPI 415
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 519 TGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPP-TTAGPSASS 653
TG TTT + T + PSI T +A NPP TTAG S +S
Sbjct: 362 TGAPTTTSAAL---SSTASTPSI-ASTATSAATNPPTTTAGASTNS 403
>Z81491-12|CAI46569.1| 177|Caenorhabditis elegans Hypothetical
protein D1086.10a protein.
Length = 177
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/58 (29%), Positives = 31/58 (53%)
Frame = +3
Query: 486 IDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASSDI 659
+ +L V+ +T T FTT T T+A + NP+++ + + P+TA +A+ I
Sbjct: 6 LTTLLVLSATPTLSFTTAPTGTSPTVDTSAVIAPNPESSPSQSTDSPSTASSTATEQI 63
>U46674-5|AAA85757.1| 708|Caenorhabditis elegans Hypothetical
protein T26A8.1 protein.
Length = 708
Score = 32.3 bits (70), Expect = 0.33
Identities = 21/86 (24%), Positives = 36/86 (41%)
Frame = +3
Query: 402 VTSKQRKSAAEYQREYQARKKAKRDNILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGP 581
+ ++ K E +++ ++ D +S T+ TTT ST TT
Sbjct: 292 INVEKEKEVEEKKKDSESELVQVIDGSTGNSTGSTVETTPSTSTTTTSSTTSTTTTTTTT 351
Query: 582 SINPQTTAGSAINPPTTAGPSASSDI 659
+ P TT + P TT+ P A+ D+
Sbjct: 352 TETPSTTVITTTIPSTTSEPEATIDV 377
>Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical
protein T06G6.8 protein.
Length = 417
Score = 31.1 bits (67), Expect = 0.76
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 513 TSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASSDIAFAKPNK 680
TST +T S TA P P + S P+TA ++++ +AF +P++
Sbjct: 321 TSTARLASTEHSEAAGAPATATPFDLPTKPSTSTTKLPSTASTTSAAPLAFTEPSE 376
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 507 PSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTT 632
P+T+T TTT ++T TT + P TT + PTT
Sbjct: 241 PTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTT 282
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/56 (26%), Positives = 27/56 (48%)
Frame = +3
Query: 507 PSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASSDIAFAKP 674
PSTST T+T ST + T+ +T +A + PT++ + ++ +P
Sbjct: 97 PSTSTSTSTSTSTSTSTSRSTSTVTPTTRSSTTTTATSTPTSSSKATTTSAQITQP 152
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 507 PSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTA--GPSASS 653
P TST +++ +T+ +T S +P +T ++ P+T+ GPS+SS
Sbjct: 457 PVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSS 507
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 510 STSTGGFTTTHQSTIVDKQTTAGPSIN---PQTTAGSAINPPTTAGPSASS 653
STST +T ST +T GPS + P +TA S+++ ++ S++S
Sbjct: 480 STSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTS 530
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 492 SLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASS 653
S V TST +T+ ST+ +T PS + + S+ P +TA S SS
Sbjct: 469 STTVTTPTSTESTSTSPSSTVT--TSTTAPSTSTTGPSSSSSTPSSTASSSVSS 520
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 30.7 bits (66), Expect = 1.0
Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = +3
Query: 507 PSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTA--GPSASS 653
P TST +++ +T+ +T S +P +T ++ P+T+ GPS+SS
Sbjct: 457 PVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSS 507
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +3
Query: 510 STSTGGFTTTHQSTIVDKQTTAGPSIN---PQTTAGSAINPPTTAGPSASS 653
STST +T ST +T GPS + P +TA S+++ ++ S++S
Sbjct: 480 STSTSPSSTVTTSTTAPSTSTTGPSSSSSTPSSTASSSVSSTASSTQSSTS 530
Score = 28.3 bits (60), Expect = 5.4
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 492 SLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASS 653
S V TST +T+ ST+ +T PS + + S+ P +TA S SS
Sbjct: 469 STTVTTPTSTESTSTSPSSTVT--TSTTAPSTSTTGPSSSSSTPSSTASSSVSS 520
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/50 (34%), Positives = 24/50 (48%)
Frame = +3
Query: 504 IPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASS 653
IPST+T TTT +T ++ TT I TT+ S T A++
Sbjct: 157 IPSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTSTSTTTTETPTTSEATT 206
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/47 (42%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +3
Query: 516 STGGFTTTHQSTIVDKQTTA-GPSINPQTTAGSAINPPTTAGPSASS 653
ST TTT T V T+ G S +PQ + NP TTA S+SS
Sbjct: 355 STAVVTTTMPVTTVQTTVTSIGTSTSPQAVVTTTGNPTTTAQLSSSS 401
>Z82264-7|CAB05164.3| 499|Caenorhabditis elegans Hypothetical
protein C49C3.13 protein.
Length = 499
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 507 PSTSTGGFTTTHQSTIVDKQT-TAGPSINPQTTAGSAINPPTTAGP 641
P+T+T TTT ++T + T T P+ TT + P TT P
Sbjct: 319 PTTTTTASTTTFKTTTITTTTQTTTPTTTATTTKPTTTTPTTTRTP 364
>U64835-5|AAG24196.1| 592|Caenorhabditis elegans Hypothetical
protein T09D3.3 protein.
Length = 592
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +3
Query: 501 VIPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAIN----PPTTAGP 641
++P+TS+ TTT + + TT P+ TT+ S PPTT+ P
Sbjct: 458 LVPTTSSSTTTTTTTTPVPVTSTTTEPTTTTYTTSTSTSTTTTLPPTTSTP 508
>U23449-1|AAC24298.3| 488|Caenorhabditis elegans Hypothetical
protein K06A1.3 protein.
Length = 488
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +3
Query: 504 IPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTT 632
IPST+T TTT ST +T + P TT ++P TT
Sbjct: 300 IPSTTTTS-TTTTTSTTTATETPTTTTERPTTTVTQVLDPTTT 341
>AC024776-1|AAK68468.1| 338|Caenorhabditis elegans Hypothetical
protein Y41D4B.18 protein.
Length = 338
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Frame = +3
Query: 513 TSTGGFT--TTHQSTIVDKQTTAGP--SINPQTTAGSAINPPTTAGPSASS 653
T+TG T TT+ T +T++ P S T++ + NPPTT+ P+ +S
Sbjct: 253 TTTGAPTNSTTNPPTATSPKTSSQPVSSSTSSTSSPAPTNPPTTSRPTTAS 303
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +3
Query: 510 STSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASSDI 659
STST TTT Q+T +T + TT+ S TT P+ DI
Sbjct: 304 STSTPTTTTTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPTTQIDI 353
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 507 PSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTT 632
P+T+T TTT +T T+ + + TT S PPTT
Sbjct: 308 PTTTTTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPTT 349
>U51998-7|AAA96080.2| 769|Caenorhabditis elegans Hypothetical
protein C12D12.1a protein.
Length = 769
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +3
Query: 483 LIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASSDIA 662
++ S A +P+T T +T T P++ P + +PP+T G S ++
Sbjct: 586 VVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAPAN 645
Query: 663 FAKP 674
P
Sbjct: 646 LTTP 649
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/64 (23%), Positives = 27/64 (42%)
Frame = +3
Query: 483 LIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASSDIA 662
++ S A +P+T T +T T P++ P + +PP+T G S ++
Sbjct: 642 VVPSSATVPTTPPTTVTVAATTTSKAPVVTTSPTLAPTSPTKLPTSPPSTVGTSPTAPAN 701
Query: 663 FAKP 674
P
Sbjct: 702 LTTP 705
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Frame = +3
Query: 477 NILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGP-----SINPQTTAGSAINPPTTAGP 641
+I+ + + P TS TTT T + TT P S+ P T + P TT P
Sbjct: 531 SIVTSTPTMAPQTSASP-TTTPTHTTASQPTTTKPVVTTNSVTPSTGTTTVPVPTTTGSP 589
Query: 642 SASSDIAFAKP 674
+ + KP
Sbjct: 590 TTQTTAPVTKP 600
>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
protein Y69A2AR.31 protein.
Length = 1219
Score = 29.5 bits (63), Expect = 2.3
Identities = 18/65 (27%), Positives = 36/65 (55%)
Frame = +3
Query: 408 SKQRKSAAEYQREYQARKKAKRDNILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSI 587
+KQR + +Y+R Y+ R++++ + + +T+T TTT +T + T P++
Sbjct: 310 NKQRAMSEQYRRRYENREQSEYILREVPTTTTTTTTTTVPPTTTRTTTTTTPRPTV-PTV 368
Query: 588 NPQTT 602
P+TT
Sbjct: 369 -PRTT 372
>AF047652-5|AAC04391.2| 449|Caenorhabditis elegans Hypothetical
protein C34H4.2 protein.
Length = 449
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +3
Query: 486 IDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSAS 650
+ S A+I +TS GG +T S+ S +P T+GS+++PP +GP+ S
Sbjct: 358 VTSPAII-TTSQGGKASTTPSSA--PPAPGSSSASPTGTSGSSVSPP-ASGPTTS 408
>AF026204-3|AAB71253.1| 424|Caenorhabditis elegans Hypothetical
protein C30E1.8 protein.
Length = 424
Score = 29.1 bits (62), Expect = 3.1
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +3
Query: 408 SKQRKSAAEYQREYQARKKAKRDNILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSI 587
S A EY +Y + K++ V P+T+T TTT ++T +Q S+
Sbjct: 250 SSTNGKAGEYYVQYFVHRGTKKET------TVKPTTTT--VTTTTKTTTTQQQPQTTQSV 301
Query: 588 NPQTTAGSAINPPT 629
QTTA S I T
Sbjct: 302 VIQTTATSTIQTTT 315
>Z84574-5|CAB06541.1| 846|Caenorhabditis elegans Hypothetical
protein F33E2.6 protein.
Length = 846
Score = 28.7 bits (61), Expect = 4.1
Identities = 22/64 (34%), Positives = 24/64 (37%)
Frame = +3
Query: 450 QARKKAKRDNILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPT 629
+A KK DN A T+T TTT D T P P TT I PP
Sbjct: 336 EAIKKYPCDNDGATEAATTKPTTTT-VTTTTVPPKTDPPRTEPPKTEPPTTEPPKIEPPR 394
Query: 630 TAGP 641
T P
Sbjct: 395 TEPP 398
>Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical
protein F28C1.2 protein.
Length = 555
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 507 PSTSTGGFTTTHQSTIVDKQTTAGPSIN--PQTTAGSAIN 620
PSTS+GG + + S TT+ PS + P TT + IN
Sbjct: 274 PSTSSGGESPSTSSAAAGTATTSAPSTSTPPVTTITATIN 313
>U80453-11|AAN63452.2| 503|Caenorhabditis elegans Hypothetical
protein C23H3.9a protein.
Length = 503
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Frame = +3
Query: 411 KQRKSAAEYQR--EYQARKKAKRDNILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPS 584
K R + Y R +A +K S P+T+T TTT + + TT +
Sbjct: 177 KDRTAWPTYNRISAEKALQKTSTTQETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQPTT 236
Query: 585 INPQTTAGSAINPPTTAGPSASS 653
+ T + PTT P +S
Sbjct: 237 TTTEPTTTTTTTEPTTTTPKVNS 259
>U80453-10|AAN63453.1| 489|Caenorhabditis elegans Hypothetical
protein C23H3.9b protein.
Length = 489
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Frame = +3
Query: 411 KQRKSAAEYQR--EYQARKKAKRDNILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPS 584
K R + Y R +A +K S P+T+T TTT + + TT +
Sbjct: 173 KDRTAWPTYNRISAEKALQKTSTTQETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQPTT 232
Query: 585 INPQTTAGSAINPPTTAGPSASS 653
+ T + PTT P +S
Sbjct: 233 TTTEPTTTTTTTEPTTTTPKVNS 255
>U80453-9|AAT81206.1| 432|Caenorhabditis elegans Hypothetical
protein C23H3.9d protein.
Length = 432
Score = 28.7 bits (61), Expect = 4.1
Identities = 21/83 (25%), Positives = 32/83 (38%), Gaps = 2/83 (2%)
Frame = +3
Query: 411 KQRKSAAEYQR--EYQARKKAKRDNILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPS 584
K R + Y R +A +K S P+T+T TTT + + TT +
Sbjct: 116 KDRTAWPTYNRISAEKALQKTSTTQETTTSTTAQPTTTTTATTTTTTTPLPTTTTTQPTT 175
Query: 585 INPQTTAGSAINPPTTAGPSASS 653
+ T + PTT P +S
Sbjct: 176 TTTEPTTTTTTTEPTTTTPKVNS 198
>U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein
signaling regulator protein.
Length = 555
Score = 28.7 bits (61), Expect = 4.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = +3
Query: 507 PSTSTGGFTTTHQSTIVDKQTTAGPSIN--PQTTAGSAIN 620
PSTS+GG + + S TT+ PS + P TT + IN
Sbjct: 274 PSTSSGGESPSTSSAAAGTATTSAPSTSTPPVTTITATIN 313
>AL032631-1|CAB63336.1| 453|Caenorhabditis elegans Hypothetical
protein Y106G6H.1 protein.
Length = 453
Score = 28.7 bits (61), Expect = 4.1
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +3
Query: 507 PSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGP 641
P+T TT +T+ D TTAG + +T+G++ P +T P
Sbjct: 100 PTTPAAPTTTADPTTVADDTTTAGAT--DSSTSGASDAPSSTPPP 142
>AF026212-4|AAF99973.2| 386|Caenorhabditis elegans Hypothetical
protein F52G3.5 protein.
Length = 386
Score = 28.7 bits (61), Expect = 4.1
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +3
Query: 399 SVTSKQRKSAAEYQREYQARKKAKRDNILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAG 578
S TS+ RK + ++ R K + + P+T+T +TTT + + D +T A
Sbjct: 202 STTSEYRKKS---KKNRSKRPKTTKTTTTSTTTTEAPTTTTEEYTTTTEEDVTDLETQA- 257
Query: 579 PSINPQT 599
P++ T
Sbjct: 258 PNVEEVT 264
>Z46794-6|CAA86776.1| 416|Caenorhabditis elegans Hypothetical
protein R06F6.6 protein.
Length = 416
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = +3
Query: 441 REYQARKKAKRDNILIDSLAVIPS--TSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSA 614
++ + RK N +S PS +S+ T Q+T D T + +P TTA SA
Sbjct: 184 KDKRDRKSENASNHTSNSRRSSPSRKSSSDSTPTPTQATQFDMPTQI-QTASPPTTADSA 242
Query: 615 INPPTT 632
I PPT+
Sbjct: 243 IFPPTS 248
>U42013-1|AAB06496.1| 415|Caenorhabditis elegans UNC-24 protein.
Length = 415
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 432 EYQREYQARKKAKRDNILIDSLAVIPSTSTGGFTT 536
++ +E A +KAK + L+D L+ +PSTS G +T
Sbjct: 267 DFAKECAAEEKAKENAPLVD-LSDVPSTSAAGTST 300
>AY081955-1|AAL92523.1| 788|Caenorhabditis elegans MAT-1 protein.
Length = 788
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +3
Query: 459 KKAKRDNILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAG 638
+K+ +NIL+ S A+I GG H +++ +P ++ S P G
Sbjct: 159 QKSLDENILLWS-AIITYLRFGGHDLAHTFEKHHRKSNGLYLDSPASSLKSETPSPNVPG 217
Query: 639 PSASSDIAFAKPNK 680
PS+SS + A+P++
Sbjct: 218 PSSSSAASTAEPSR 231
>AF045644-5|AAC02604.1| 415|Caenorhabditis elegans Uncoordinated
protein 24 protein.
Length = 415
Score = 28.3 bits (60), Expect = 5.4
Identities = 14/35 (40%), Positives = 23/35 (65%)
Frame = +3
Query: 432 EYQREYQARKKAKRDNILIDSLAVIPSTSTGGFTT 536
++ +E A +KAK + L+D L+ +PSTS G +T
Sbjct: 267 DFAKECAAEEKAKENAPLVD-LSDVPSTSAAGTST 300
>AC006708-14|AAT81172.1| 273|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 1,
isoform b protein.
Length = 273
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +3
Query: 459 KKAKRDNILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAG 638
+K+ +NIL+ S A+I GG H +++ +P ++ S P G
Sbjct: 159 QKSLDENILLWS-AIITYLRFGGHDLAHTFEKHHRKSNGLYLDSPASSLKSETPSPNVPG 217
Query: 639 PSASSDIAFAKPNK 680
PS+SS + A+P++
Sbjct: 218 PSSSSAASTAEPSR 231
>AC006708-13|AAF60415.1| 788|Caenorhabditis elegans
Metaphase-to-anaphase transitiondefect protein 1,
isoform a protein.
Length = 788
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/74 (27%), Positives = 36/74 (48%)
Frame = +3
Query: 459 KKAKRDNILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAG 638
+K+ +NIL+ S A+I GG H +++ +P ++ S P G
Sbjct: 159 QKSLDENILLWS-AIITYLRFGGHDLAHTFEKHHRKSNGLYLDSPASSLKSETPSPNVPG 217
Query: 639 PSASSDIAFAKPNK 680
PS+SS + A+P++
Sbjct: 218 PSSSSAASTAEPSR 231
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 27.9 bits (59), Expect = 7.1
Identities = 18/56 (32%), Positives = 25/56 (44%)
Frame = +3
Query: 495 LAVIPSTSTGGFTTTHQSTIVDKQTTAGPSINPQTTAGSAINPPTTAGPSASSDIA 662
+ + +T T TT ST TT +I P TT NP + SA+S +A
Sbjct: 415 VVITTTTKTSPKPTTSPSTTTS--TTTSTTIPPSTTTRKPANPRRSTIMSATSKVA 468
>U80438-5|AAB37636.1| 1217|Caenorhabditis elegans Nuclear pore complex
protein protein7 protein.
Length = 1217
Score = 27.9 bits (59), Expect = 7.1
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +3
Query: 606 GSAINPPTTAGPSASSDIAFAKPN 677
G++ NPP GPS+SS AF+ N
Sbjct: 1042 GASTNPPMFGGPSSSSIPAFSTSN 1065
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +3
Query: 510 STSTGGFTTTHQSTIVDKQTTAGP-SINPQTTAGSAINPPTTA 635
+TST +TT +ST TT P + +P TT I P T A
Sbjct: 220 TTSTFPTSTTEKSTTAQPSTTTKPTTTSPPTTQVKTILPATEA 262
>U23486-2|AAL38957.1| 318|Caenorhabditis elegans Hypothetical
protein F07F6.8 protein.
Length = 318
Score = 27.9 bits (59), Expect = 7.1
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = -1
Query: 649 LAEGPAVVGGLIADPAV-VCGLIEGPA 572
+A G AV+GGLI P V + GLI G A
Sbjct: 90 IASGIAVIGGLILMPPVAIAGLIVGTA 116
>AF125459-12|AAD12832.1| 533|Caenorhabditis elegans Hypothetical
protein Y25C1A.4 protein.
Length = 533
Score = 27.9 bits (59), Expect = 7.1
Identities = 21/59 (35%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +3
Query: 492 SLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSI--NPQTTAGSAINPPTTAGPSASSDIA 662
S +PSTST TTT ++ TTA + + TTA T AG S S+ A
Sbjct: 30 STTTVPSTST--VTTTTVASTSSGSTTASTAAGGSTSTTAAGGSTASTAAGGSTSTTAA 86
>Z93389-2|CAB07671.2| 355|Caenorhabditis elegans Hypothetical
protein T13F3.3 protein.
Length = 355
Score = 27.5 bits (58), Expect = 9.4
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = -2
Query: 102 SNQISK*NNEYYTRKLKLNNK*IRI 28
+ Q+SK +EYY R+LKL N RI
Sbjct: 316 TEQLSKDLHEYYVRELKLENYAFRI 340
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 27.5 bits (58), Expect = 9.4
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 537 THQSTIVDKQTTAGPSI--NPQTTAGSAINPPTTAGPS 644
T +S+I + TT P++ P +NPPTT PS
Sbjct: 376 TEKSSIYEYSTTPHPTLIYEPHGETLPTLNPPTTTTPS 413
>AF125459-13|AAD12833.1| 605|Caenorhabditis elegans Hypothetical
protein Y25C1A.3 protein.
Length = 605
Score = 27.5 bits (58), Expect = 9.4
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +3
Query: 480 ILIDSLAVIPSTSTGGFTTTHQSTIVDKQTTAGPSI--NPQTTAGSAINPPTTAGPSASS 653
+L+ + A+ TST TTT ++ TTA + + TTA T AG S S+
Sbjct: 13 VLLMAGALSQDTSTSTVTTTTVASTSSGSTTASTAAGGSTSTTAAGGSTASTAAGGSTST 72
Query: 654 DIA 662
A
Sbjct: 73 TAA 75
>AF106582-1|AAC78217.3| 1424|Caenorhabditis elegans Hypothetical
protein W05F2.7 protein.
Length = 1424
Score = 27.5 bits (58), Expect = 9.4
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +3
Query: 516 STGGFTTTHQSTIVDKQTTAGPSI-NPQTTAGSAIN 620
STGGF T +TI T+G + N QT G A++
Sbjct: 1080 STGGFLTNAWNTIGSNNGTSGNIVNNTQTWIGGAVD 1115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,910,696
Number of Sequences: 27780
Number of extensions: 269696
Number of successful extensions: 1303
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1261
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -