BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12c22
(703 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF515523-1|AAM61890.1| 222|Anopheles gambiae glutathione S-tran... 26 1.3
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 25 2.3
AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine... 24 5.3
AJ237705-1|CAB40346.1| 557|Anopheles gambiae putative apyrase p... 24 5.3
AJ237704-1|CAB40345.1| 557|Anopheles gambiae apyrase protein. 24 5.3
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 23 7.0
DQ370046-1|ABD18607.1| 125|Anopheles gambiae putative secreted ... 23 9.3
>AF515523-1|AAM61890.1| 222|Anopheles gambiae glutathione
S-transferase u2 protein.
Length = 222
Score = 25.8 bits (54), Expect = 1.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 109 PAPTLYRATASTSQRIAFILIPDLEL 32
PAPTLY S R +L+ +LEL
Sbjct: 2 PAPTLYYFPMSPPARAVLLLMKELEL 27
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 25.0 bits (52), Expect = 2.3
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 7/52 (13%)
Frame = -3
Query: 356 FETGECDCGDEAVTRVTHIVPGDRTSMCASI---VDGLDKNTAS----YRYR 222
F T C TRV HI+P + + +C + V+G D AS YRYR
Sbjct: 980 FVTANLPCNKHK-TRVPHILPYESSRVCLTPIRGVEGSDYINASLVDGYRYR 1030
>AJ459779-1|CAD30839.1| 405|Anopheles gambiae clip-domain serine
protease protein.
Length = 405
Score = 23.8 bits (49), Expect = 5.3
Identities = 10/29 (34%), Positives = 15/29 (51%)
Frame = -3
Query: 383 NVHTSVRPVFETGECDCGDEAVTRVTHIV 297
N+HT+ V+E DC D+ + V V
Sbjct: 205 NIHTNPDCVYENDLKDCSDDMIDLVPQAV 233
>AJ237705-1|CAB40346.1| 557|Anopheles gambiae putative apyrase
protein.
Length = 557
Score = 23.8 bits (49), Expect = 5.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 255 AIYNTGTHRGPVPRHNVCN 311
AI N G R P+P+ ++ N
Sbjct: 393 AIINAGNFRSPIPKGDITN 411
>AJ237704-1|CAB40345.1| 557|Anopheles gambiae apyrase protein.
Length = 557
Score = 23.8 bits (49), Expect = 5.3
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = +3
Query: 255 AIYNTGTHRGPVPRHNVCN 311
AI N G R P+P+ ++ N
Sbjct: 393 AIINAGNFRSPIPKGDITN 411
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 23.4 bits (48), Expect = 7.0
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +3
Query: 231 IRCRIFIQAIYNTGTHRGPVPRHNVC 308
+RC ++ +N R PV R NVC
Sbjct: 549 LRCYRCLEHGHNARDCRSPVDRQNVC 574
>DQ370046-1|ABD18607.1| 125|Anopheles gambiae putative secreted
polypeptide protein.
Length = 125
Score = 23.0 bits (47), Expect = 9.3
Identities = 7/14 (50%), Positives = 8/14 (57%)
Frame = +2
Query: 134 PCYYQNCYWDITIC 175
PCY NCY + C
Sbjct: 66 PCYQLNCYGTVLDC 79
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 765,967
Number of Sequences: 2352
Number of extensions: 17011
Number of successful extensions: 25
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71504505
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -