Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12c22
(703 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-3800|AAN14054.2| 881|Drosophila melanogaster CG31439-P... 31 1.1
BT021290-1|AAX33438.1| 985|Drosophila melanogaster RE31401p pro... 31 1.5
AE014298-785|AAF46074.1| 985|Drosophila melanogaster CG4078-PA ... 31 1.5
AY052126-1|AAK93550.1| 809|Drosophila melanogaster SD07737p pro... 30 2.6
AE014134-2831|AAF53603.1| 1135|Drosophila melanogaster CG6860-PB... 30 2.6
AE014134-2830|AAN10986.1| 809|Drosophila melanogaster CG6860-PA... 30 2.6
>AE014297-3800|AAN14054.2| 881|Drosophila melanogaster CG31439-PA
protein.
Length = 881
Score = 31.5 bits (68), Expect = 1.1
Identities = 23/111 (20%), Positives = 32/111 (28%)
Frame = -1
Query: 619 TLTALCPDRVIGTSCLTDY*AER*TWPLTRFAAAGTSCWKTALDVSKCAATPEITTIISC 440
T T T+C T T T+ T + C T TT +
Sbjct: 157 TTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTT 216
Query: 439 LLTRLIPSSVSRTCALVFATCTPALDPSLKRANVTAATKRSRVLHTLCRGT 287
T ++ + T TCTP + T T + T C T
Sbjct: 217 TTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTTTTTTTCTPT 267
Score = 31.5 bits (68), Expect = 1.1
Identities = 23/111 (20%), Positives = 32/111 (28%)
Frame = -1
Query: 619 TLTALCPDRVIGTSCLTDY*AER*TWPLTRFAAAGTSCWKTALDVSKCAATPEITTIISC 440
T T T+C T T T+ T + C T TT +
Sbjct: 275 TTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTT 334
Query: 439 LLTRLIPSSVSRTCALVFATCTPALDPSLKRANVTAATKRSRVLHTLCRGT 287
T ++ + T TCTP + T T + T C T
Sbjct: 335 TTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTTTTTTTCTPT 385
Score = 31.5 bits (68), Expect = 1.1
Identities = 28/135 (20%), Positives = 37/135 (27%)
Frame = -1
Query: 673 TRVTMRAQIT*RKSQADNTLTALCPDRVIGTSCLTDY*AER*TWPLTRFAAAGTSCWKTA 494
T T T + T T C T+ T T P T T+ T
Sbjct: 467 TTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTPTTTTTCTPTTTTTTT 526
Query: 493 LDVSKCAATPEITTIISCLLTRLIPSSVSRTCALVFATCTPALDPSLKRANVTAATKRSR 314
+ T TT + T ++ + T AT TP T T +
Sbjct: 527 TTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTATTTPTTTTCTPTTTTTTTTTTTT 586
Query: 313 VLHTLCRGTGPLCVP 269
T T C P
Sbjct: 587 TTTTTTTTTTTTCTP 601
Score = 28.7 bits (61), Expect = 8.1
Identities = 19/85 (22%), Positives = 27/85 (31%)
Frame = -1
Query: 541 PLTRFAAAGTSCWKTALDVSKCAATPEITTIISCLLTRLIPSSVSRTCALVFATCTPALD 362
P T T+ T + TP TT + T ++ + T TCTP
Sbjct: 437 PTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTTTTTTTT-TTCTPTTT 495
Query: 361 PSLKRANVTAATKRSRVLHTLCRGT 287
+ T T + T C T
Sbjct: 496 TTTTTTTTTTTTTTTPTTTTTCTPT 520
Score = 28.7 bits (61), Expect = 8.1
Identities = 19/85 (22%), Positives = 27/85 (31%)
Frame = -1
Query: 541 PLTRFAAAGTSCWKTALDVSKCAATPEITTIISCLLTRLIPSSVSRTCALVFATCTPALD 362
P T T+ T + TP TT + T ++ + T TCTP
Sbjct: 519 PTTTTTTTTTTTTTTTTTTTTTTCTPTTTTTTTTTTTTTTTTTTATTTPTT-TTCTPTTT 577
Query: 361 PSLKRANVTAATKRSRVLHTLCRGT 287
+ T T + T C T
Sbjct: 578 TTTTTTTTTTTTTTTTTTTTTCTPT 602
>BT021290-1|AAX33438.1| 985|Drosophila melanogaster RE31401p
protein.
Length = 985
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 291 PRHNVCNTRDRFVAAVTFARFKDGSNAGVHVANTSAHVRETLEGIK 428
P VC T D +AA+ + + GSNA AN SA E IK
Sbjct: 766 PLETVCKTEDEPLAAIPKVKREPGSNATFKSANESAIKVEMANSIK 811
>AE014298-785|AAF46074.1| 985|Drosophila melanogaster CG4078-PA
protein.
Length = 985
Score = 31.1 bits (67), Expect = 1.5
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 291 PRHNVCNTRDRFVAAVTFARFKDGSNAGVHVANTSAHVRETLEGIK 428
P VC T D +AA+ + + GSNA AN SA E IK
Sbjct: 766 PLETVCKTEDEPLAAIPKVKREPGSNATFKSANESAIKVEMANSIK 811
>AY052126-1|AAK93550.1| 809|Drosophila melanogaster SD07737p
protein.
Length = 809
Score = 30.3 bits (65), Expect = 2.6
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Frame = +1
Query: 214 HSTRYLYDAVFLSRPSTILAHIEVLSP-GTMCVTRVTASSPQSH--SPVSKTGLTLVCTL 384
HS L DA S STI+ LSP + C S+ S+ SP + L
Sbjct: 390 HSQADLMDASLTSSTSTIVDESLTLSPTASPCKLSYAHSNSSSNGSSPDQDDDIMLDHQE 449
Query: 385 RTLVHTFGRHSRGLSGL---TNMRLLLLSRALQRIS--KRLVPSSNNS 513
RT+ H GR +GL + + L + Q IS K+ P++N+S
Sbjct: 450 RTVHHANGRSGKGLGNIQTYKEYKEALKQQRNQEISVYKQKHPNANHS 497
>AE014134-2831|AAF53603.1| 1135|Drosophila melanogaster CG6860-PB,
isoform B protein.
Length = 1135
Score = 30.3 bits (65), Expect = 2.6
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Frame = +1
Query: 214 HSTRYLYDAVFLSRPSTILAHIEVLSP-GTMCVTRVTASSPQSH--SPVSKTGLTLVCTL 384
HS L DA S STI+ LSP + C S+ S+ SP + L
Sbjct: 390 HSQADLMDASLTSSTSTIVDESLTLSPTASPCKLSYAHSNSSSNGSSPDQDDDIMLDHQE 449
Query: 385 RTLVHTFGRHSRGLSGL---TNMRLLLLSRALQRIS--KRLVPSSNNS 513
RT+ H GR +GL + + L + Q IS K+ P++N+S
Sbjct: 450 RTVHHANGRSGKGLGNIQTYKEYKEALKQQRNQEISVYKQKHPNANHS 497
>AE014134-2830|AAN10986.1| 809|Drosophila melanogaster CG6860-PA,
isoform A protein.
Length = 809
Score = 30.3 bits (65), Expect = 2.6
Identities = 33/108 (30%), Positives = 47/108 (43%), Gaps = 8/108 (7%)
Frame = +1
Query: 214 HSTRYLYDAVFLSRPSTILAHIEVLSP-GTMCVTRVTASSPQSH--SPVSKTGLTLVCTL 384
HS L DA S STI+ LSP + C S+ S+ SP + L
Sbjct: 390 HSQADLMDASLTSSTSTIVDESLTLSPTASPCKLSYAHSNSSSNGSSPDQDDDIMLDHQE 449
Query: 385 RTLVHTFGRHSRGLSGL---TNMRLLLLSRALQRIS--KRLVPSSNNS 513
RT+ H GR +GL + + L + Q IS K+ P++N+S
Sbjct: 450 RTVHHANGRSGKGLGNIQTYKEYKEALKQQRNQEISVYKQKHPNANHS 497
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,766,140
Number of Sequences: 53049
Number of extensions: 729256
Number of successful extensions: 1783
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1780
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -