Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12c19
(419 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P41679 Cluster: Uncharacterized 28.5 kDa protein in PK2... 209 2e-53
UniRef50_O10361 Cluster: Uncharacterized 26.5 kDa protein; n=7; ... 95 4e-19
UniRef50_A4VCV0 Cluster: Putative uncharacterized protein; n=1; ... 35 0.77
UniRef50_UPI0000498695 Cluster: hypothetical protein 238.t00003;... 34 1.0
UniRef50_Q21PL3 Cluster: NnrS; n=1; Saccharophagus degradans 2-4... 34 1.3
UniRef50_Q7RCC9 Cluster: Mechanosensitive ion channel, putative;... 33 3.1
UniRef50_O62413 Cluster: Putative uncharacterized protein sri-18... 32 4.1
UniRef50_Q2FAV9 Cluster: Rh13; n=2; Cercopithecine herpesvirus 8... 32 5.4
UniRef50_Q7UVY6 Cluster: Putative uncharacterized protein; n=1; ... 31 7.2
UniRef50_A3UNQ4 Cluster: Small-conductance mechanosensitive chan... 31 9.5
UniRef50_A7LIC4 Cluster: NADH dehydrogenase subunit 4; n=1; Argo... 31 9.5
>UniRef50_P41679 Cluster: Uncharacterized 28.5 kDa protein in
PK2-LEF7 intergenic region; n=5;
Nucleopolyhedrovirus|Rep: Uncharacterized 28.5 kDa
protein in PK2-LEF7 intergenic region - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 247
Score = 209 bits (510), Expect = 2e-53
Identities = 95/109 (87%), Positives = 104/109 (95%)
Frame = +3
Query: 3 LELLILLGHTMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKTKLVDSSLMFNSFMC 182
+ELLILLGHTMG YTDY+Y KSCYMVILFVSVMS TIVMGLECLKTKL+D+SLMFN+F+C
Sbjct: 135 VELLILLGHTMGTYTDYQYVKSCYMVILFVSVMSVTIVMGLECLKTKLIDNSLMFNAFVC 194
Query: 183 ALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFSNIVMDDI 329
ALYI+IA +WSLKNNLTS+Y SNLQSIQVVPFSYNDPPPPFSNIVMDDI
Sbjct: 195 ALYIVIAIMWSLKNNLTSYYVSNLQSIQVVPFSYNDPPPPFSNIVMDDI 243
>UniRef50_O10361 Cluster: Uncharacterized 26.5 kDa protein; n=7;
Nucleopolyhedrovirus|Rep: Uncharacterized 26.5 kDa
protein - Orgyia pseudotsugata multicapsid polyhedrosis
virus (OpMNPV)
Length = 243
Score = 95.5 bits (227), Expect = 4e-19
Identities = 45/107 (42%), Positives = 67/107 (62%)
Frame = +3
Query: 3 LELLILLGHTMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKTKLVDSSLMFNSFMC 182
+EL +LLGH +G Y+DYRYAK+CYM+ LFVS I +G +K+ + +L+ +
Sbjct: 134 VELTVLLGHALGTYSDYRYAKACYMLALFVSAAVAVITVGASGMKSAPLCDNLLVAVVLS 193
Query: 183 ALYIMIATVWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFSNIVMD 323
Y+++A VW+ + NLQ +QVVPF NDPPP F+++ MD
Sbjct: 194 IAYLLVAIVWAARKEAA---GPNLQRVQVVPF--NDPPPSFASVEMD 235
>UniRef50_A4VCV0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 275
Score = 34.7 bits (76), Expect = 0.77
Identities = 17/35 (48%), Positives = 23/35 (65%)
Frame = -2
Query: 238 KLVKLFFKDHTVAIIMYKAHINELNIKLLSTSFVF 134
KL LFFK+ + +Y+A IN LN+ LS SF+F
Sbjct: 119 KLYLLFFKE--ILRYLYQAQINNLNLNFLSCSFIF 151
>UniRef50_UPI0000498695 Cluster: hypothetical protein 238.t00003;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 238.t00003 - Entamoeba histolytica HM-1:IMSS
Length = 1755
Score = 34.3 bits (75), Expect = 1.0
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Frame = +3
Query: 84 LFVSVM-SFTIVMGLECLKTKLVDSSLM---FNSFMCA-LYIMIATVWSLKNNLTSFYAS 248
LFV+ +F + + CL KL DS L+ NS C+ LYI ++VWS+ N +T+++
Sbjct: 381 LFVNQKKAFNTIDNITCLNFKL-DSVLVQSDINSINCSKLYITSSSVWSISNIITNYFEF 439
Query: 249 NLQSIQVV 272
+ + +V
Sbjct: 440 SKSTFFIV 447
>UniRef50_Q21PL3 Cluster: NnrS; n=1; Saccharophagus degradans
2-40|Rep: NnrS - Saccharophagus degradans (strain 2-40 /
ATCC 43961 / DSM 17024)
Length = 418
Score = 33.9 bits (74), Expect = 1.3
Identities = 19/62 (30%), Positives = 33/62 (53%)
Frame = +3
Query: 15 ILLGHTMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKTKLVDSSLMFNSFMCALYI 194
+ LGHT T R+A Y+ I +++ F +VMG + L ++ M+ CAL++
Sbjct: 343 VCLGHTGRPLTLPRFAIGIYISITLAALLRFAVVMGWVDFRVGLAIAATMW-VVACALFV 401
Query: 195 MI 200
+I
Sbjct: 402 II 403
>UniRef50_Q7RCC9 Cluster: Mechanosensitive ion channel, putative;
n=6; Plasmodium (Vinckeia)|Rep: Mechanosensitive ion
channel, putative - Plasmodium yoelii yoelii
Length = 1715
Score = 32.7 bits (71), Expect = 3.1
Identities = 14/42 (33%), Positives = 28/42 (66%)
Frame = +3
Query: 66 SCYMVILFVSVMSFTIVMGLECLKTKLVDSSLMFNSFMCALY 191
SC+ +ILFV++ SF+I+M + + K++ L+ S +C+ +
Sbjct: 132 SCF-IILFVNIASFSIIMIIHAIIQKVIIEKLLQPSALCSAF 172
>UniRef50_O62413 Cluster: Putative uncharacterized protein sri-18;
n=2; Caenorhabditis|Rep: Putative uncharacterized
protein sri-18 - Caenorhabditis elegans
Length = 346
Score = 32.3 bits (70), Expect = 4.1
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Frame = +3
Query: 18 LLGHTMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKTKLVDSSLMFNSFMCAL--- 188
L+ + G DYRY + +IL + + F+I+M L + ++ F S +
Sbjct: 34 LICYHHGMIDDYRYYLLYFQIILLIFDIYFSILMVPIPLFPVIGGYTIGFLSNFFGISTH 93
Query: 189 YIMIATVWSLKNNLTSFYASNLQSIQVV 272
Y M+ T+W + N T + S L+ QVV
Sbjct: 94 YQMVFTLWCIGNTNTCIFISLLKRHQVV 121
>UniRef50_Q2FAV9 Cluster: Rh13; n=2; Cercopithecine herpesvirus
8|Rep: Rh13 - Cercopithecine herpesvirus 8 (Rhesus
cytomegalovirus)
Length = 104
Score = 31.9 bits (69), Expect = 5.4
Identities = 18/42 (42%), Positives = 22/42 (52%)
Frame = -2
Query: 223 FFKDHTVAIIMYKAHINELNIKLLSTSFVFKHSKPITIVKLI 98
F HTV + Y AH +L I LLSTSF +T+ LI
Sbjct: 45 FVLGHTVVLTRYAAHSPKLFIVLLSTSFRMTELSHVTVWFLI 86
>UniRef50_Q7UVY6 Cluster: Putative uncharacterized protein; n=1;
Pirellula sp.|Rep: Putative uncharacterized protein -
Rhodopirellula baltica
Length = 514
Score = 31.5 bits (68), Expect = 7.2
Identities = 16/48 (33%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = +3
Query: 150 DSSLMFNSFMCALYIMIATVWSLKNNLTSFY-ASNLQSIQVVPFSYND 290
D ++ + C L + +A WSL ++ S A L I+ PFSY+D
Sbjct: 82 DPTMNHSRINCILVVALAVGWSLSFSVLSVVSAQGLMDIEEPPFSYSD 129
>UniRef50_A3UNQ4 Cluster: Small-conductance mechanosensitive
channel; n=2; Vibrio|Rep: Small-conductance
mechanosensitive channel - Vibrio splendidus 12B01
Length = 191
Score = 31.1 bits (67), Expect = 9.5
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +3
Query: 54 RYAKSCYMVILFVSVMS-FTIVMGLECLKTKLVDSSLMFNSFMCALYIMIATVWSLKNNL 230
++ C+ ++LF+ ++ FTIV+ L D SL +S L + + WS+ +NL
Sbjct: 50 QFVIKCFNIVLFLLFIAVFTIVLNLG-----FGDISLFLSSIFAVLGVALFAQWSILSNL 104
Query: 231 TS 236
T+
Sbjct: 105 TA 106
>UniRef50_A7LIC4 Cluster: NADH dehydrogenase subunit 4; n=1;
Argopecten irradians|Rep: NADH dehydrogenase subunit 4 -
Aequipecten irradians (Bay scallop) (Argopecten
irradians)
Length = 438
Score = 31.1 bits (67), Expect = 9.5
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 47 GLSICQIMLYGYIVCFSYEFYY 112
G+SIC I +GY++CF F++
Sbjct: 356 GMSICSIFPFGYVLCFILLFFF 377
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 310,809,790
Number of Sequences: 1657284
Number of extensions: 5050963
Number of successful extensions: 14353
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14347
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 19389441554
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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