Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12c19
         (419 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.23 
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    24   0.52 
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    22   2.8  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   3.7  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   4.9  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   4.9  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   4.9  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    20   8.5  
AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    20   8.5  
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    20   8.5  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.4 bits (53), Expect = 0.23
 Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +3

Query: 84  LFVSVMSFTIVMGLECLKTKLVDSSLMFNSFMCA-LYIMIATVWSL 218
           LF + +SF     +  L  +L+     F+SFM + L+  +A+ W L
Sbjct: 73  LFCASLSFYKAFKIGILLNQLITPLFFFHSFMTSVLFSQVASRWPL 118



 Score = 21.4 bits (43), Expect = 3.7
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +2

Query: 74  YGYIVCFSYEFYYCYGFRMFENE 142
           +GY+ C S  FY  +   +  N+
Sbjct: 70  FGYLFCASLSFYKAFKIGILLNQ 92


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 24.2 bits (50), Expect = 0.52
 Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
 Frame = +3

Query: 30  TMGAYTDYRYAKSCYMVILFVSVMSFTIVMGLECLKTKLVDSSL-MFNSFMCALYIMIA 203
           T+G     +  K+C +VI+F  ++   ++      K  L D  L  FN+F   L  +++
Sbjct: 29  TVGKCQRLKTDKNCTIVIIFHLILFAVLLYFASLEKNPLFDGQLYSFNTFAKLLIFVVS 87


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 8/17 (47%), Positives = 8/17 (47%)
 Frame = +2

Query: 68  MLYGYIVCFSYEFYYCY 118
           M   YI CF    YY Y
Sbjct: 1   MFLAYIACFLLLLYYIY 17


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 10/34 (29%), Positives = 16/34 (47%)
 Frame = +3

Query: 207 VWSLKNNLTSFYASNLQSIQVVPFSYNDPPPPFS 308
           ++SL+  LT  Y   ++     PF     P PF+
Sbjct: 283 IFSLRPGLTHKYTHEIKLHDKTPFLKRPYPVPFA 316


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 347 KLLFIFYVIHYNVRERWR 294
           KLL   Y I+YN +E  R
Sbjct: 117 KLLINLYTINYNFKESER 134


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory
          receptor candidate 27 protein.
          Length = 346

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = -3

Query: 66 IWHIDNPCTR 37
          +WH++NP  R
Sbjct: 22 VWHVENPTYR 31


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = -1

Query: 209 HCCNHNVQSAHKRVKHQTAIN 147
           H   H++ + H  V H  A N
Sbjct: 324 HHAGHHIHAQHHVVNHHVAAN 344


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 69  MIWHIDNPCTRPLCG 25
           M+W +D    R +CG
Sbjct: 354 MVWSLDTDDFRGICG 368


>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 69  MIWHIDNPCTRPLCG 25
           M+W +D    R +CG
Sbjct: 355 MVWSLDTDDFRGICG 369


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 69  MIWHIDNPCTRPLCG 25
           M+W +D    R +CG
Sbjct: 355 MVWSLDTDDFRGICG 369


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,484
Number of Sequences: 336
Number of extensions: 1386
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9279512
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)