Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12c15
         (634 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132951-2|CAC44305.1|  561|Caenorhabditis elegans Hypothetical ...    33   0.13 
Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical pr...    28   6.4  
U29488-10|AAK93843.1|  813|Caenorhabditis elegans Dnaj domain (p...    28   6.4  
AL117204-38|CAL49444.1|  982|Caenorhabditis elegans Hypothetical...    28   6.4  
AL117204-32|CAJ43915.1|  145|Caenorhabditis elegans Hypothetical...    28   6.4  
AL117204-31|CAB55122.2|  727|Caenorhabditis elegans Hypothetical...    28   6.4  

>AL132951-2|CAC44305.1|  561|Caenorhabditis elegans Hypothetical
           protein Y67H2A.4a protein.
          Length = 561

 Score = 33.5 bits (73), Expect = 0.13
 Identities = 19/55 (34%), Positives = 28/55 (50%)
 Frame = +3

Query: 447 LLNAIKILTNTERIRSIQFGEPLPEDVQAAFDNVLEYIDDIDTAXDFYKMGGFAM 611
           +L  +K     E ++ I FGE        AF   L +IDD+D A  F+KM G ++
Sbjct: 428 MLKRVKRRFKGENLKGISFGET------KAFFEFLYHIDDVDIALHFHKMAGMSI 476


>Z54284-4|CAA91061.1| 1001|Caenorhabditis elegans Hypothetical
           protein D2085.4 protein.
          Length = 1001

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/42 (26%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
 Frame = +3

Query: 450 LNAIKILTN--TERIRSIQFGEPLPEDVQAAFDNVLEYIDDI 569
           +NA+++  N   +R+ S+   + +P D+   FD+ +E++ D+
Sbjct: 418 VNALELFCNCLNKRVSSVADSDFVPTDIFVDFDHTVEFLRDV 459


>U29488-10|AAK93843.1|  813|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 8 protein.
          Length = 813

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +3

Query: 537 FDNVLEYIDDIDTAXDFYKMGGFAMF 614
           FD+V ++ D+ + A  FY  GGF  F
Sbjct: 88  FDDVKQFEDNAERARSFYGFGGFGGF 113


>AL117204-38|CAL49444.1|  982|Caenorhabditis elegans Hypothetical
            protein Y116A8C.16c protein.
          Length = 982

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = -3

Query: 410  IFKEFASFFINWSQFRVPWCIFSFC--GFHCKP*KSLQVSWLP 288
            +F  F  FF N  QF  PWCI+  C   F C         WLP
Sbjct: 940  LFILFVVFFGN-VQFDCPWCIYFNCLPVFECHNQGQKLKKWLP 981


>AL117204-32|CAJ43915.1|  145|Caenorhabditis elegans Hypothetical
           protein Y116A8C.16b protein.
          Length = 145

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = -3

Query: 410 IFKEFASFFINWSQFRVPWCIFSFC--GFHCKP*KSLQVSWLP 288
           +F  F  FF N  QF  PWCI+  C   F C         WLP
Sbjct: 103 LFILFVVFFGN-VQFDCPWCIYFNCLPVFECHNQGQKLKKWLP 144


>AL117204-31|CAB55122.2|  727|Caenorhabditis elegans Hypothetical
           protein Y116A8C.16a protein.
          Length = 727

 Score = 27.9 bits (59), Expect = 6.4
 Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
 Frame = -3

Query: 410 IFKEFASFFINWSQFRVPWCIFSFC--GFHCKP*KSLQVSWLP 288
           +F  F  FF N  QF  PWCI+  C   F C         WLP
Sbjct: 685 LFILFVVFFGN-VQFDCPWCIYFNCLPVFECHNQGQKLKKWLP 726


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,953,085
Number of Sequences: 27780
Number of extensions: 244091
Number of successful extensions: 693
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 693
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)