Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12c13
(716 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase prot... 34 0.44
BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongatio... 34 0.44
BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein. 34 0.44
AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription ... 34 0.44
AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein. 34 0.44
AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongatio... 34 0.44
X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein. 31 3.1
S81243-1|AAB36006.1| 684|Homo sapiens CHN protein. 31 3.1
D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan rec... 31 3.1
AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfam... 31 3.1
AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfam... 31 3.1
AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfam... 31 3.1
AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfam... 31 3.1
AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfam... 31 3.1
AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens ... 31 5.4
AF086921-1|AAP97151.1| 526|Homo sapiens D-myo-inositol-3-phosph... 31 5.4
M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein. 30 7.2
M74027-1|AAA59875.1| 573|Homo sapiens mucin protein. 30 7.2
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein. 30 7.2
BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein. 30 7.2
AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein. 30 7.2
AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X menta... 30 7.2
AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X menta... 30 7.2
AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin ... 30 7.2
AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interactin... 30 7.2
AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein. 30 7.2
AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activatin... 30 7.2
AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing a... 30 7.2
AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein. 30 7.2
BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein. 30 9.5
AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein ... 30 9.5
AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein. 30 9.5
AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein. 30 9.5
>U91543-1|AAC39923.1| 2000|Homo sapiens zinc-finger helicase protein.
Length = 2000
Score = 34.3 bits (75), Expect = 0.44
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 522 IKPPSPAISATSTRSSNPRFHTPTTPDLTS----ISINPLTPYXKEFAPGLKPPLSSE 683
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1517 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>BC111727-1|AAI11728.1| 1077|Homo sapiens transcription elongation
regulator 1 protein.
Length = 1077
Score = 34.3 bits (75), Expect = 0.44
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +3
Query: 531 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPG-----LKPPLSSEAPSA 695
P+PA+S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAP 324
Query: 696 YLTP 707
TP
Sbjct: 325 TATP 328
>BC110648-1|AAI10649.1| 661|Homo sapiens CHD3 protein protein.
Length = 661
Score = 34.3 bits (75), Expect = 0.44
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 522 IKPPSPAISATSTRSSNPRFHTPTTPDLTS----ISINPLTPYXKEFAPGLKPPLSSE 683
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 178 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 235
>AF017789-1|AAB80727.1| 1098|Homo sapiens putative transcription
factor CA150 protein.
Length = 1098
Score = 34.3 bits (75), Expect = 0.44
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +3
Query: 531 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPG-----LKPPLSSEAPSA 695
P+PA+S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 266 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAR 324
Query: 696 YLTP 707
TP
Sbjct: 325 TATP 328
>AF006515-1|AAB87383.1| 1944|Homo sapiens CHD3 protein.
Length = 1944
Score = 34.3 bits (75), Expect = 0.44
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = +3
Query: 522 IKPPSPAISATSTRSSNPRFHTPTTPDLTS----ISINPLTPYXKEFAPGLKPPLSSE 683
+ P A S S+R+S+P +PTTP+ ++ + P TP E G++ PL E
Sbjct: 1517 LMPDPSADSKRSSRASSPTKTSPTTPEASATNSPCTSKPATPAPSEKGEGIRTPLEKE 1574
>AB209910-1|BAD93147.1| 1081|Homo sapiens transcription elongation
regulator 1 variant protein.
Length = 1081
Score = 34.3 bits (75), Expect = 0.44
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 5/64 (7%)
Frame = +3
Query: 531 PSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPG-----LKPPLSSEAPSA 695
P+PA+S TST SS P T TT TS++ TP ++ P P +S P+
Sbjct: 270 PAPAVS-TSTSSSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPAP 328
Query: 696 YLTP 707
TP
Sbjct: 329 TATP 332
>X89894-1|CAA61984.1| 443|Homo sapiens nuclear receptor protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 248 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 409
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>S81243-1|AAB36006.1| 684|Homo sapiens CHN protein.
Length = 684
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 248 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 409
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 93 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 144
>D78579-1|BAA11419.1| 626|Homo sapiens neuron derived orphan
receptor protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 248 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 409
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-3|CAI95139.1| 443|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 248 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 409
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-2|CAI95138.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 248 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 409
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL359710-1|CAM16648.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 248 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 409
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AL358937-4|CAI95320.1| 626|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 626
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 248 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 409
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 35 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 86
>AL358937-3|CAM22558.1| 637|Homo sapiens nuclear receptor subfamily
4, group A, member 3 protein.
Length = 637
Score = 31.5 bits (68), Expect = 3.1
Identities = 16/54 (29%), Positives = 28/54 (51%)
Frame = +2
Query: 248 FQRLYFDLTGTETKSNSVTVQSLPNVSSIIKGYRDAYLVNLEAVVFPSAPSLKI 409
+ +L DL TE + + T SLP++S+ ++GY Y + V P +K+
Sbjct: 46 YTKLTMDLGSTEITATATT--SLPSISTFVEGYSSNYELKPSCVYQMQRPLIKV 97
>AK127507-1|BAC87013.1| 130|Homo sapiens protein ( Homo sapiens
cDNA FLJ45600 fis, clone BRTHA3020369. ).
Length = 130
Score = 30.7 bits (66), Expect = 5.4
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +1
Query: 508 SRPYASSHPPLRSRLHQPDHQIPDSIHQPPQ 600
S P++S HP + +H Q P + QPPQ
Sbjct: 99 SLPHSSIHPSIHPSIHPSFIQTPSGLSQPPQ 129
>AF086921-1|AAP97151.1| 526|Homo sapiens D-myo-inositol-3-phosphate
synthase protein.
Length = 526
Score = 30.7 bits (66), Expect = 5.4
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Frame = -3
Query: 474 ASTLPP-STVTSAVVQQRSTVTGILR--LGAEGKTTASRLTRYASR*PFMME 328
A +PP S V +A+ +QRS + ILR +G+ +TT S T+++++ P E
Sbjct: 465 APLVPPGSPVVNALFRQRSCIENILRACVGSRHRTTCSWNTKWSAQGPASSE 516
>M94131-1|AAA59163.1| 1270|Homo sapiens mucin protein.
Length = 1270
Score = 30.3 bits (65), Expect = 7.2
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 528 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 707
PP+ S +T + +P T TTP T+ +P+T + P + PS+ +T
Sbjct: 1027 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 1086
Query: 708 SS 713
++
Sbjct: 1087 TT 1088
Score = 29.9 bits (64), Expect = 9.5
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +3
Query: 531 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PYXKEFAPGLKPPLSSEAPSA 695
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 898 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 957
Query: 696 YLTPS 710
TPS
Sbjct: 958 TTTPS 962
Score = 29.9 bits (64), Expect = 9.5
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +3
Query: 531 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PYXKEFAPGLKPPLSSEAPSA 695
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 977 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1036
Query: 696 YLTPS 710
TPS
Sbjct: 1037 TTTPS 1041
>M74027-1|AAA59875.1| 573|Homo sapiens mucin protein.
Length = 573
Score = 30.3 bits (65), Expect = 7.2
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 528 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 707
PP+ S +T + +P T TTP T+ +P+T + P + PS+ +T
Sbjct: 310 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 369
Query: 708 SS 713
++
Sbjct: 370 TT 371
Score = 29.9 bits (64), Expect = 9.5
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +3
Query: 531 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PYXKEFAPGLKPPLSSEAPSA 695
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 181 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 240
Query: 696 YLTPS 710
TPS
Sbjct: 241 TTTPS 245
Score = 29.9 bits (64), Expect = 9.5
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +3
Query: 531 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PYXKEFAPGLKPPLSSEAPSA 695
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 260 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 319
Query: 696 YLTPS 710
TPS
Sbjct: 320 TTTPS 324
>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
Length = 5179
Score = 30.3 bits (65), Expect = 7.2
Identities = 16/62 (25%), Positives = 29/62 (46%)
Frame = +3
Query: 528 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAPSAYLTP 707
PP+ S +T + +P T TTP T+ +P+T + P + PS+ +T
Sbjct: 1652 PPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 1711
Query: 708 SS 713
++
Sbjct: 1712 TT 1713
Score = 29.9 bits (64), Expect = 9.5
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +3
Query: 531 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PYXKEFAPGLKPPLSSEAPSA 695
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 1523 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1582
Query: 696 YLTPS 710
TPS
Sbjct: 1583 TTTPS 1587
Score = 29.9 bits (64), Expect = 9.5
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Frame = +3
Query: 531 PSPAISATST----RSSNPRFHTPTTPDLTSISINPLT-PYXKEFAPGLKPPLSSEAPSA 695
PSP + T+T + +P TP TP ++ ++ P T P PP ++ +P
Sbjct: 1602 PSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPT 1661
Query: 696 YLTPS 710
TPS
Sbjct: 1662 TTTPS 1666
>BC117331-1|AAI17332.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.2
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 531 PSPAISATSTRSSNPRFHTPT-----TPDLTSISINPLTPYXKEFAPGLKPPLSSEAPS 692
PS A ++TS R+S P TPT TP T I LTP G P + + AP+
Sbjct: 10 PSSARTSTSVRASTPT-RTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPA 67
>AY324825-1|AAP85542.1| 346|Homo sapiens selenoprotein V protein.
Length = 346
Score = 30.3 bits (65), Expect = 7.2
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 5/59 (8%)
Frame = +3
Query: 531 PSPAISATSTRSSNPRFHTPT-----TPDLTSISINPLTPYXKEFAPGLKPPLSSEAPS 692
PS A ++TS R+S P TPT TP T I LTP G P + + AP+
Sbjct: 10 PSSARTSTSVRASTPT-RTPTPLRTPTPVRTRTPIRTLTPVLTPSPAGTSPLVLTPAPA 67
>AL359706-1|CAI12865.1| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 30.3 bits (65), Expect = 7.2
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 528 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAP 689
PP P S+ S P + + S+ P P+ + PG +PP +++P
Sbjct: 46 PPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AL354816-1|CAC40689.2| 495|Homo sapiens nuclear fragile X mental
retardation protein interacting protein 1 protein.
Length = 495
Score = 30.3 bits (65), Expect = 7.2
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 528 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAP 689
PP P S+ S P + + S+ P P+ + PG +PP +++P
Sbjct: 46 PPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AF492646-1|AAO85488.1| 546|Homo sapiens proline rich, vinculin and
TIR domain containing protein-B protein.
Length = 546
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 624 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 716
P TP E +P PP S P SA+LTPSSL
Sbjct: 211 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 242
>AF159548-1|AAF15315.1| 495|Homo sapiens nuclear FMRP interacting
protein 1 protein.
Length = 495
Score = 30.3 bits (65), Expect = 7.2
Identities = 14/54 (25%), Positives = 24/54 (44%)
Frame = +3
Query: 528 PPSPAISATSTRSSNPRFHTPTTPDLTSISINPLTPYXKEFAPGLKPPLSSEAP 689
PP P S+ S P + + S+ P P+ + PG +PP +++P
Sbjct: 46 PPPPLTSSLPAAGSKPSSESQPPMEAQSLPGAP-PPFDAQILPGAQPPFDAQSP 98
>AF070530-1|AAC28630.1| 416|Homo sapiens unknown protein.
Length = 416
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 624 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 716
P TP E +P PP S P SA+LTPSSL
Sbjct: 54 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 85
>AB097023-1|BAC77376.1| 712|Homo sapiens putative NFkB activating
protein protein.
Length = 712
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 624 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 716
P TP E +P PP S P SA+LTPSSL
Sbjct: 350 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB093555-1|BAC44839.1| 712|Homo sapiens TIR domain containing
adaptor inducing interferon-beta protein.
Length = 712
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 624 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 716
P TP E +P PP S P SA+LTPSSL
Sbjct: 350 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
>AB086380-1|BAC55579.1| 712|Homo sapiens TICAM-1 protein.
Length = 712
Score = 30.3 bits (65), Expect = 7.2
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 624 PLTPYXKEFAPGLKPPLSSEAP-SAYLTPSSL 716
P TP E +P PP S P SA+LTPSSL
Sbjct: 350 PPTPTTPETSPPPPPPPPSSTPCSAHLTPSSL 381
>BC064693-1|AAH64693.1| 1235|Homo sapiens AUTS2 protein protein.
Length = 1235
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Frame = +3
Query: 546 SATSTRSSNPRFHTPTTPDLT---SISINPLT-PYXK---EFAPGLKPPLSSEAPSAYLT 704
S +S+RSS P P P ++ S S PL+ P F P L+PP S P+ +
Sbjct: 403 SLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAP 462
Query: 705 PSSL 716
P++L
Sbjct: 463 PTAL 466
>AF326917-1|AAL37411.1| 1259|Homo sapiens autism-related protein 1
protein.
Length = 1259
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Frame = +3
Query: 546 SATSTRSSNPRFHTPTTPDLT---SISINPLT-PYXK---EFAPGLKPPLSSEAPSAYLT 704
S +S+RSS P P P ++ S S PL+ P F P L+PP S P+ +
Sbjct: 403 SLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAP 462
Query: 705 PSSL 716
P++L
Sbjct: 463 PTAL 466
>AC073873-1|AAS07468.1| 1011|Homo sapiens unknown protein.
Length = 1011
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Frame = +3
Query: 546 SATSTRSSNPRFHTPTTPDLT---SISINPLT-PYXK---EFAPGLKPPLSSEAPSAYLT 704
S +S+RSS P P P ++ S S PL+ P F P L+PP S P+ +
Sbjct: 155 SLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAP 214
Query: 705 PSSL 716
P++L
Sbjct: 215 PTAL 218
>AB007902-1|BAA23714.2| 1266|Homo sapiens KIAA0442 protein.
Length = 1266
Score = 29.9 bits (64), Expect = 9.5
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Frame = +3
Query: 546 SATSTRSSNPRFHTPTTPDLT---SISINPLT-PYXK---EFAPGLKPPLSSEAPSAYLT 704
S +S+RSS P P P ++ S S PL+ P F P L+PP S P+ +
Sbjct: 434 SLSSSRSSTPAKTQPAPPHISHHPSASPFPLSLPNHSPLHSFTPTLQPPAHSHHPNMFAP 493
Query: 705 PSSL 716
P++L
Sbjct: 494 PTAL 497
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,037,164
Number of Sequences: 237096
Number of extensions: 2051599
Number of successful extensions: 6640
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 6086
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6614
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8399192100
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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