Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12b17
(746 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein. 29 5.1
AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p pro... 29 5.1
AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,... 29 5.1
AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,... 29 5.1
AY051961-1|AAK93385.1| 512|Drosophila melanogaster LD42896p pro... 29 8.9
AE014134-2749|AAN10953.2| 398|Drosophila melanogaster CG17161-P... 29 8.9
AE014134-2748|AAF53551.2| 512|Drosophila melanogaster CG17161-P... 29 8.9
AE014134-2747|AAN10952.1| 512|Drosophila melanogaster CG17161-P... 29 8.9
AE014134-2746|AAF53552.2| 512|Drosophila melanogaster CG17161-P... 29 8.9
>D49534-1|BAA08478.1| 1893|Drosophila melanogaster cno protein.
Length = 1893
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 655 FRLNLKRVINMFLNDEIENDKIYKLVETV 741
FRL L + +N FL++ I++D LV TV
Sbjct: 586 FRLELSQTLNQFLSENIDHDSAAGLVLTV 614
>AY058547-1|AAL13776.1| 2051|Drosophila melanogaster LD24616p
protein.
Length = 2051
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 655 FRLNLKRVINMFLNDEIENDKIYKLVETV 741
FRL L + +N FL++ I++D LV TV
Sbjct: 755 FRLELSQTLNQFLSENIDHDSAAGLVLTV 783
>AE014297-185|AAF52067.2| 2051|Drosophila melanogaster CG2534-PA,
isoform A protein.
Length = 2051
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 655 FRLNLKRVINMFLNDEIENDKIYKLVETV 741
FRL L + +N FL++ I++D LV TV
Sbjct: 755 FRLELSQTLNQFLSENIDHDSAAGLVLTV 783
>AE014297-184|AAN13260.1| 1882|Drosophila melanogaster CG2534-PB,
isoform B protein.
Length = 1882
Score = 29.5 bits (63), Expect = 5.1
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +1
Query: 655 FRLNLKRVINMFLNDEIENDKIYKLVETV 741
FRL L + +N FL++ I++D LV TV
Sbjct: 586 FRLELSQTLNQFLSENIDHDSAAGLVLTV 614
>AY051961-1|AAK93385.1| 512|Drosophila melanogaster LD42896p
protein.
Length = 512
Score = 28.7 bits (61), Expect = 8.9
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 559 NWSNRQRSPLRCPWSK-PLLAIGCANKSIRTRI-FRLNLKRVI-NMFLNDEI-ENDKIYK 726
NW + L+ PWSK LAI K + T RL L++ + + + N + +N++ Y
Sbjct: 232 NWRDNDHWQLQTPWSKLDTLAISLLRKLLATSPGTRLTLEKTLDHKWCNMQFADNERSYD 291
Query: 727 LVET 738
LV++
Sbjct: 292 LVDS 295
>AE014134-2749|AAN10953.2| 398|Drosophila melanogaster CG17161-PD,
isoform D protein.
Length = 398
Score = 28.7 bits (61), Expect = 8.9
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 559 NWSNRQRSPLRCPWSK-PLLAIGCANKSIRTRI-FRLNLKRVI-NMFLNDEI-ENDKIYK 726
NW + L+ PWSK LAI K + T RL L++ + + + N + +N++ Y
Sbjct: 118 NWRDNDHWQLQTPWSKLDTLAISLLRKLLATSPGTRLTLEKTLDHKWCNMQFADNERSYD 177
Query: 727 LVET 738
LV++
Sbjct: 178 LVDS 181
>AE014134-2748|AAF53551.2| 512|Drosophila melanogaster CG17161-PC,
isoform C protein.
Length = 512
Score = 28.7 bits (61), Expect = 8.9
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 559 NWSNRQRSPLRCPWSK-PLLAIGCANKSIRTRI-FRLNLKRVI-NMFLNDEI-ENDKIYK 726
NW + L+ PWSK LAI K + T RL L++ + + + N + +N++ Y
Sbjct: 232 NWRDNDHWQLQTPWSKLDTLAISLLRKLLATSPGTRLTLEKTLDHKWCNMQFADNERSYD 291
Query: 727 LVET 738
LV++
Sbjct: 292 LVDS 295
>AE014134-2747|AAN10952.1| 512|Drosophila melanogaster CG17161-PB,
isoform B protein.
Length = 512
Score = 28.7 bits (61), Expect = 8.9
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 559 NWSNRQRSPLRCPWSK-PLLAIGCANKSIRTRI-FRLNLKRVI-NMFLNDEI-ENDKIYK 726
NW + L+ PWSK LAI K + T RL L++ + + + N + +N++ Y
Sbjct: 232 NWRDNDHWQLQTPWSKLDTLAISLLRKLLATSPGTRLTLEKTLDHKWCNMQFADNERSYD 291
Query: 727 LVET 738
LV++
Sbjct: 292 LVDS 295
>AE014134-2746|AAF53552.2| 512|Drosophila melanogaster CG17161-PA,
isoform A protein.
Length = 512
Score = 28.7 bits (61), Expect = 8.9
Identities = 20/64 (31%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Frame = +1
Query: 559 NWSNRQRSPLRCPWSK-PLLAIGCANKSIRTRI-FRLNLKRVI-NMFLNDEI-ENDKIYK 726
NW + L+ PWSK LAI K + T RL L++ + + + N + +N++ Y
Sbjct: 232 NWRDNDHWQLQTPWSKLDTLAISLLRKLLATSPGTRLTLEKTLDHKWCNMQFADNERSYD 291
Query: 727 LVET 738
LV++
Sbjct: 292 LVDS 295
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,972,073
Number of Sequences: 53049
Number of extensions: 453776
Number of successful extensions: 989
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 968
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 989
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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