BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12b15
(655 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08358 Cluster: Protein p26; n=9; Nucleopolyhedrovirus|... 367 e-101
UniRef50_P11037 Cluster: Protein p26; n=8; Nucleopolyhedrovirus|... 153 4e-36
UniRef50_Q80LR5 Cluster: P26; n=4; Nucleopolyhedrovirus|Rep: P26... 107 3e-22
UniRef50_Q5EFK2 Cluster: P26; n=1; Clanis bilineata nucleopolyhe... 104 2e-21
UniRef50_O55400 Cluster: P26; n=1; Buzura suppressaria NPV|Rep: ... 104 2e-21
UniRef50_Q77K96 Cluster: P26; n=3; Nucleopolyhedrovirus|Rep: P26... 102 9e-21
UniRef50_Q9IBR1 Cluster: ORF129 p26; n=2; Nucleopolyhedrovirus|R... 100 3e-20
UniRef50_Q8B4A2 Cluster: P26; n=1; Bombyx mori NPV|Rep: P26 - Bo... 94 2e-18
UniRef50_A0EYS1 Cluster: P26-a; n=1; Ecotropis obliqua NPV|Rep: ... 91 2e-17
UniRef50_Q4KT61 Cluster: P26; n=5; Nucleopolyhedrovirus|Rep: P26... 84 3e-15
UniRef50_Q0IL99 Cluster: P26; n=1; Leucania separata nuclear pol... 73 8e-12
UniRef50_A0EYV5 Cluster: P26-b; n=1; Ecotropis obliqua NPV|Rep: ... 52 1e-05
UniRef50_UPI000023D23A Cluster: hypothetical protein FG06171.1; ... 34 3.4
UniRef50_A0BMZ2 Cluster: Chromosome undetermined scaffold_117, w... 33 4.5
UniRef50_Q0UR58 Cluster: Predicted protein; n=1; Phaeosphaeria n... 33 4.5
UniRef50_Q62HI1 Cluster: Putative uncharacterized protein; n=1; ... 33 6.0
UniRef50_UPI00015B6255 Cluster: PREDICTED: similar to GA21569-PA... 33 7.9
>UniRef50_P08358 Cluster: Protein p26; n=9;
Nucleopolyhedrovirus|Rep: Protein p26 - Autographa
californica nuclear polyhedrosis virus (AcMNPV)
Length = 240
Score = 367 bits (904), Expect = e-101
Identities = 175/192 (91%), Positives = 183/192 (95%)
Frame = +1
Query: 40 MELYNIKYAIDPTNKIVXEQVDNVDAFVHILEPGQEVFDETLXRYHQFPGVVSSIIFTQL 219
MELYNIKYAIDPTNKIV EQVDNVDAFVHILEPGQEVFDETL +YHQFPGVVSSIIF QL
Sbjct: 1 MELYNIKYAIDPTNKIVIEQVDNVDAFVHILEPGQEVFDETLSQYHQFPGVVSSIIFPQL 60
Query: 220 VLNTIISVLSEDGXLLPLKLENTCFXFHVCNKRFVFGNLPAAIVNNETKQKLRIGSPIFA 399
VLNTIISVLSEDG LL LKLENTCF FHVCNKRFVFGNLPAA+VNNETKQKLRIG+PIFA
Sbjct: 61 VLNTIISVLSEDGSLLTLKLENTCFNFHVCNKRFVFGNLPAAVVNNETKQKLRIGAPIFA 120
Query: 400 GEKLVSVVTTFHRVGENEWLLPVTGIQEASRLSGHIKVPNGVRVEKLRPNMSVYGTVQLP 579
G+KLVSVVT FHRVGENEWLLPVTGI+EAS+LSGH+KV NGVRVEK RPNMSVYGTVQLP
Sbjct: 121 GKKLVSVVTAFHRVGENEWLLPVTGIREASQLSGHMKVLNGVRVEKWRPNMSVYGTVQLP 180
Query: 580 YDKIKRHALEQE 615
YDKIK+HALEQE
Sbjct: 181 YDKIKQHALEQE 192
Score = 32.7 bits (71), Expect = 7.9
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 611 KKNKTPNALESCVLF 655
++NKTPNALESCVLF
Sbjct: 191 QENKTPNALESCVLF 205
>UniRef50_P11037 Cluster: Protein p26; n=8;
Nucleopolyhedrovirus|Rep: Protein p26 - Orgyia
pseudotsugata multicapsid polyhedrosis virus (OpMNPV)
Length = 230
Score = 153 bits (371), Expect = 4e-36
Identities = 73/174 (41%), Positives = 110/174 (63%)
Frame = +1
Query: 97 QVDNVDAFVHILEPGQEVFDETLXRYHQFPGVVSSIIFTQLVLNTIISVLSEDGXLLPLK 276
Q+ + FV + EPGQEVFD++L ++HQFPGV +S++F QL + T + V + G
Sbjct: 17 QIGGQEVFVMVFEPGQEVFDKSLDQHHQFPGVATSVVFPQLSIGTKVDVFTSSGGFGAT- 75
Query: 277 LENTCFXFHVCNKRFVFGNLPAAIVNNETKQKLRIGSPIFAGEKLVSVVTTFHRVGENEW 456
++ CF +HVCNKRFVFG++PA + + ++ LRIG+PI ++LVS+VT H + W
Sbjct: 76 -DHHCFNYHVCNKRFVFGSVPALEIPADVREHLRIGAPITCADRLVSLVTAVH-AADGAW 133
Query: 457 LLPVTGIQEASRLSGHIKVPNGVRVEKLRPNMSVYGTVQLPYDKIKRHALEQEK 618
LL VT + A ++SGH + +R SVYG VQLPY+++K HA + +
Sbjct: 134 LLRVTAAR-AGQVSGHARQQRRGAGRTVRAGRSVYGPVQLPYEQLKAHAFRKRR 186
>UniRef50_Q80LR5 Cluster: P26; n=4; Nucleopolyhedrovirus|Rep: P26 -
Adoxophyes honmai nucleopolyhedrovirus
Length = 268
Score = 107 bits (256), Expect = 3e-22
Identities = 66/189 (34%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Frame = +1
Query: 52 NIKYAIDPTNK-IVXEQVDNVDAFVHILEP-GQEVFDETLXRYHQFPGVVSSIIFTQLVL 225
N++Y I+ K I QVD + P G E H FPGV +S++F +
Sbjct: 25 NVEYTINHLEKTITVTQVDEKTCIIKTFPPLGSTDNQEEYDMLHHFPGVATSVLFPSIKN 84
Query: 226 NTIISVLSEDGXLLPLKLENTCFXFHVCNKRFVFGNLPA-AIVNNETKQKLRIGSPIFAG 402
++++SVL DG + FH KR V+G L + A+ + K+ IG+PIF
Sbjct: 85 SSMLSVLLNDGTTFSAVADKVYTNFHSHKKRMVYGQLLSFAVEDLNLANKIYIGAPIFLN 144
Query: 403 EKLVSVVTTFH-RVGENEWLLPVTGIQEASRLSGHIKVPNGVRVEKLRPNMSVYGTVQLP 579
KL+SVVT H E + PVTGI+ + +SG + + V + MSVYG QLP
Sbjct: 145 NKLISVVTARHDNYEEGLVIYPVTGIRPDNLVSGQFNFDDQIIVTQFVKGMSVYGKRQLP 204
Query: 580 YDKIKRHAL 606
Y +KRHA+
Sbjct: 205 YMALKRHAI 213
>UniRef50_Q5EFK2 Cluster: P26; n=1; Clanis bilineata
nucleopolyhedrosis virus|Rep: P26 - Clanis bilineata
nucleopolyhedrosis virus
Length = 287
Score = 104 bits (250), Expect = 2e-21
Identities = 59/184 (32%), Positives = 99/184 (53%), Gaps = 5/184 (2%)
Frame = +1
Query: 46 LYNIKYAIDPTNKIVXEQ-VDNVDAFVHILEPGQEVF-DETLXRYHQFPGVVSSIIFTQL 219
++N+ Y ++ + + Q VD +A V ++ P D+ L H FPGV + II +
Sbjct: 38 IHNVIYTVNDVQRAINIQMVDGKEAQVVVIPPHSNTNNDDRLDMLHHFPGVATDIILPSI 97
Query: 220 VLNTIISVLSEDGXLLPLKLENTCFX-FHVCNKRFVFGNLPAAIVNNET-KQKLRIGSPI 393
N ++ +L D L ++ F +H R VFG L A +V + T ++ IG+P+
Sbjct: 98 QANDMVEILLSDHVLWRTGVDANVFTNYHTHKNRIVFGQLRAVVVKDFTLADQIYIGAPV 157
Query: 394 FAGEKLVSVVTT-FHRVGENEWLLPVTGIQEASRLSGHIKVPNGVRVEKLRPNMSVYGTV 570
F ++L+SV+T F + + P+TG++ A +SG I + V V++L+P +SVYG
Sbjct: 158 FKEKRLISVITCRFDDYTNQQVIFPLTGLRAAGLVSGQINYDDNVTVQQLKPGLSVYGRR 217
Query: 571 QLPY 582
QLPY
Sbjct: 218 QLPY 221
>UniRef50_O55400 Cluster: P26; n=1; Buzura suppressaria NPV|Rep: P26
- Buzura suppressaria nuclear polyhedrosis virus (BsNPV)
Length = 263
Score = 104 bits (250), Expect = 2e-21
Identities = 69/198 (34%), Positives = 98/198 (49%), Gaps = 5/198 (2%)
Frame = +1
Query: 4 FFASYTLNRTDVMELYNIKYAIDPTNK-IVXEQVDNVDAFVHILEPGQEVFDETLXRYHQ 180
F A L+ + N+ Y +D NK I V+ V+ V I+ P E HQ
Sbjct: 6 FLAIAFLSTAKTSSINNVHYIVDEFNKSIKITHVNGVEVTVQIIPPHGEFSTREFDTMHQ 65
Query: 181 FPGVVSSIIFTQLVLN-TIISVLSEDGXLLPLKLENTCFXFHVCNKRFVFGNLPAAIVNN 357
FPGV + ++ T + I+ VL +DG LL FHV R V+G L + ++
Sbjct: 66 FPGVATDLLLTGAPSDKAILHVLMKDGNLLRTTANRVFSNFHVYRHRMVYGQLYTFVTDD 125
Query: 358 ETK-QKLRIGSPIFAGEKLVSVVTT-FHRVGENEWLLPVTGIQEASRLSGHIKVP-NGVR 528
+ +K+ +G+PIF KLVSVVT F PVTG++ +SG + N V+
Sbjct: 126 FGEAEKIYLGAPIFYNNKLVSVVTCRFDDYERGLVYFPVTGVRHDRLISGQLHFDDNIVK 185
Query: 529 VEKLRPNMSVYGTVQLPY 582
V +L+P MSVYG QLPY
Sbjct: 186 VTRLQPGMSVYGRNQLPY 203
>UniRef50_Q77K96 Cluster: P26; n=3; Nucleopolyhedrovirus|Rep: P26 -
Helicoverpa armigera NPV
Length = 267
Score = 102 bits (244), Expect = 9e-21
Identities = 64/187 (34%), Positives = 106/187 (56%), Gaps = 6/187 (3%)
Frame = +1
Query: 40 MELYNIKYAID-PTNKIVXEQVDNVDAFVHILEPGQEVFD-ETLXRYHQFPGVVSSIIFT 213
++ YN++Y ID N+I+ +VDN ++++ G + D +TL R H FPGV +S++F
Sbjct: 21 LQRYNVEYTIDNDLNRILIHKVDNRTVSINVI--GHQSNDSDTLDRLHHFPGVATSVMFP 78
Query: 214 QLVLNTIISVLSEDGXLLPLKLENTCFXFHVCNKRFVFGNLPA-AIVNNETKQKLRIGSP 390
++ + + + VL ++G + + E +HV R V+ L A+ + + IG+P
Sbjct: 79 RIDMTSALFVLLKNGAMARVVPEFVYTNYHVHKHRLVYSQLATFALEDRTVADMVLIGAP 138
Query: 391 IFAGEKLVSVVTTFHRVGENEWLL-PVTGIQEASRLSGHIKVP--NGVRVEKLRPNMSVY 561
IF +KLVSVVT H + + ++ PVTGI+ + +SG I+ NGV E+L SVY
Sbjct: 139 IFRNKKLVSVVTHRHDDRDRDAVMFPVTGIRPRNLVSGQIQFDSNNGVTPERLLTGRSVY 198
Query: 562 GTVQLPY 582
G Q+ Y
Sbjct: 199 GRRQMSY 205
>UniRef50_Q9IBR1 Cluster: ORF129 p26; n=2; Nucleopolyhedrovirus|Rep:
ORF129 p26 - Spodoptera exigua MNPV
Length = 278
Score = 100 bits (240), Expect = 3e-20
Identities = 62/200 (31%), Positives = 101/200 (50%), Gaps = 8/200 (4%)
Frame = +1
Query: 7 FASYTL----NRTDVMELYNIKYAID-PTNKIVXEQVDNVDAFVHILEPGQEVF-DETLX 168
FAS+ L + + M +N+KY +D ++ + VD + ++ P + D+ L
Sbjct: 4 FASFLLVLICSASSTMAAFNVKYVVDHEARTMIVQSVDGRPVSIFVIPPNSDTNGDDKLT 63
Query: 169 RYHQFPGVVSSIIFTQLVLNTIISVLSEDGXLLPLKLENTCFXFHVCNKRFVFGNLPAAI 348
HQFPGV +S+ F + N + V +G L + FH R V+G L
Sbjct: 64 WLHQFPGVATSVAFPSISQNDDLLVQLNNGVLYKTRATRVYTNFHTHKNRMVYGQLLTFA 123
Query: 349 VNN-ETKQKLRIGSPIFAGEKLVSVVTT-FHRVGENEWLLPVTGIQEASRLSGHIKVPNG 522
V+ + K+ +G+PIF ++VSVVT F + + PV G++ A +SG + +
Sbjct: 124 VDEFDIANKIYVGAPIFRAGEMVSVVTCRFDDYEKGLVVFPVAGMRPAGLISGQMMFDDR 183
Query: 523 VRVEKLRPNMSVYGTVQLPY 582
V V+KL+ +M+VYG QLPY
Sbjct: 184 VIVKKLKADMAVYGRQQLPY 203
>UniRef50_Q8B4A2 Cluster: P26; n=1; Bombyx mori NPV|Rep: P26 -
Bombyx mori nuclear polyhedrosis virus (BmNPV)
Length = 41
Score = 94.3 bits (224), Expect = 2e-18
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = +3
Query: 408 ASFGCDDVSSCWRKRMAATGDGNSRSVSAVGTHKGAERRPC 530
ASFGCDDVSSCWRKRMAATGDGNSRSVSAVGTHKGAERRPC
Sbjct: 1 ASFGCDDVSSCWRKRMAATGDGNSRSVSAVGTHKGAERRPC 41
>UniRef50_A0EYS1 Cluster: P26-a; n=1; Ecotropis obliqua NPV|Rep:
P26-a - Ecotropis obliqua NPV
Length = 300
Score = 91.1 bits (216), Expect = 2e-17
Identities = 59/189 (31%), Positives = 96/189 (50%), Gaps = 7/189 (3%)
Frame = +1
Query: 46 LYNIKYAIDPTNKIVXE-QVDNVDAFVHIL-EPGQEVFDETLXRYHQFPGVVSSIIFTQL 219
+Y+ +Y ID + V + +N + VH++ G +E H +PGV + ++FT
Sbjct: 42 MYSTEYIIDHNARRVDVFKNNNENVSVHVIGAQGCTTGNENFDVLHHYPGVATDVVFTSA 101
Query: 220 VLNTIISVLSEDGXLLPLKLENTCFXFHVCNKRFVFGNLPAAIVNN-ETKQKLRIGSPIF 396
V +T++ VL DG LL + +T FH +R ++G L +++ K+ G+PIF
Sbjct: 102 VKHTVLHVLLSDGILLRVTPTHTFTNFHSHKQRIIYGQLNTFSIDDFSLANKIYTGAPIF 161
Query: 397 AGEKLVSVVTT-FHRVGENEWLLPVTGIQEASRLSGHIKVPNG---VRVEKLRPNMSVYG 564
+ KLVSV+T + PVTG + + +SG I+ N ++VEK M +YG
Sbjct: 162 SNGKLVSVITARSDDFDKGLVYYPVTGARVPNLISGQIQYDNNAGPIKVEKFDSTMHIYG 221
Query: 565 TVQLPYDKI 591
QLP I
Sbjct: 222 KKQLPVRSI 230
>UniRef50_Q4KT61 Cluster: P26; n=5; Nucleopolyhedrovirus|Rep: P26 -
Chrysodeixis chalcites nucleopolyhedrovirus
Length = 299
Score = 83.8 bits (198), Expect = 3e-15
Identities = 66/200 (33%), Positives = 98/200 (49%), Gaps = 15/200 (7%)
Frame = +1
Query: 52 NIKYAIDPTNKIVXE-QVDNVDAFVHILEPGQEV-FDET------LXRYHQFPGVVSSII 207
N++Y+ID KI+ VD + + P + + +T L H FPGV S I+
Sbjct: 51 NVEYSIDENEKIIRVVAVDGKAVRIETIRPHSDSNYIKTGDDQPPLSVLHHFPGVASDIV 110
Query: 208 FTQLV-LNTIISVLSEDGXLLPLKLENTCFXFHVCNKRFVFGNLPAAIVNNE-TKQKLRI 381
F + N + VL DG L ++ E+ FH R ++G L V++ K+ I
Sbjct: 111 FPAIDNSNDSLMVLLNDGILFRVQPEHVYTNFHRHANRLIYGQLRTFAVDDLWIADKIWI 170
Query: 382 GSPIFAGEKLVSVVTT-FHRVGENEWLLPVTGIQEASRLSGHIKVPNGVRVEKLRPNMSV 558
G+PIF ++LVSV+T + L PV+GI+ +SG I + V V LR MSV
Sbjct: 171 GAPIFFNDRLVSVITCRYDDYDAGIVLFPVSGIRPKGLVSGQINYDSTVYVSLLRNGMSV 230
Query: 559 YGTVQL----PYDKIKRHAL 606
YG Q+ PY +K+ AL
Sbjct: 231 YGKRQMAYSSPYMTVKKFAL 250
>UniRef50_Q0IL99 Cluster: P26; n=1; Leucania separata nuclear
polyhedrosis virus|Rep: P26 - Leucania separata nuclear
polyhedrosis virus (LsNPV)
Length = 256
Score = 72.5 bits (170), Expect = 8e-12
Identities = 50/161 (31%), Positives = 82/161 (50%), Gaps = 9/161 (5%)
Frame = +1
Query: 154 DETLXRYHQFPGVVSSIIFTQLVLNTIISVLSEDGXLLPLKLEN----TCFXFHVCNKRF 321
D+ L R H FPGV S+I+F + ++ I+ V+ D L + + N F FHV R
Sbjct: 46 DDELDRLHHFPGVASTIVFPFVEIDQILYVMLSDLTLQRVHIVNDDHEPLFNFHVYKNRV 105
Query: 322 VFGNLPA-AIVNNETKQKLRIGSPIFAG---EKLVSVVTTFHRVGENEWLLPVTGIQEAS 489
V+G L + + K+ +G+PIF+ +VSVVT R + PV+G++
Sbjct: 106 VYGQLRSFEAPDRNVANKIYVGAPIFSDASKRNVVSVVTA--RCALPDLRFPVSGVRSEG 163
Query: 490 RLSGHIKVPNGVRVEKLR-PNMSVYGTVQLPYDKIKRHALE 609
+SG I++ +++ R + SVYG Y IK+ A++
Sbjct: 164 LVSGQIEIDGEYVIQRQRTADTSVYGRKVATYADIKKFAID 204
>UniRef50_A0EYV5 Cluster: P26-b; n=1; Ecotropis obliqua NPV|Rep:
P26-b - Ecotropis obliqua NPV
Length = 222
Score = 52.0 bits (119), Expect = 1e-05
Identities = 47/168 (27%), Positives = 78/168 (46%), Gaps = 8/168 (4%)
Frame = +1
Query: 52 NIKYAIDPTNKIVX-EQVDNVDAFVHILEPGQEVFDETLXRYHQFPGVVSSIIFTQLVLN 228
N+ +D K V E + V VHI + Q HQ+PG+ SS++ ++ +
Sbjct: 7 NVMCKVDFVQKRVNCESYNGVPLLVHIFK--QYDASAEWQNLHQYPGLASSMVLPKIAAS 64
Query: 229 TIISVLSED----GXLLPLKLENT--CFXFHVCNKRFVFGNLPAAIVNNETKQKLRIGSP 390
+ + ++ D G + + + H K FV+G +P AIV+ + +L G+P
Sbjct: 65 SCVQIVKFDVGTTGFTTTIHALDVKLYYVHHRYGKHFVYGLVP-AIVSLQNDLELYTGAP 123
Query: 391 IFAGE-KLVSVVTTFHRVGENEWLLPVTGIQEASRLSGHIKVPNGVRV 531
IF + L+S VT NE ++PVT E+ R+ G V V+V
Sbjct: 124 IFNNKNNLISFVTDSFLSDINELIVPVT--SESHRMQGMFCVTGCVKV 169
>UniRef50_UPI000023D23A Cluster: hypothetical protein FG06171.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06171.1 - Gibberella zeae PH-1
Length = 1112
Score = 33.9 bits (74), Expect = 3.4
Identities = 18/40 (45%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 562 RKQTCWVAIFQHGRRS--APLCVPTAETLLEFPSPVAAIR 449
R+ I QH RRS P+ VP TLL FPSP ++ R
Sbjct: 155 RRPNSRTIILQHPRRSRTVPVSVPGTRTLLSFPSPPSSAR 194
>UniRef50_A0BMZ2 Cluster: Chromosome undetermined scaffold_117,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_117,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 860
Score = 33.5 bits (73), Expect = 4.5
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +1
Query: 457 LLPVTGIQEASRLSGHIKVPNGVRVEKLRPNMSVYGTVQLPYDK 588
+L TG+ S+ S + +PN VR+E + N + YG L YDK
Sbjct: 464 ILDQTGLYYCSKGSFELFLPNSVRIESPQQNNAFYGLNYLFYDK 507
>UniRef50_Q0UR58 Cluster: Predicted protein; n=1; Phaeosphaeria
nodorum|Rep: Predicted protein - Phaeosphaeria nodorum
(Septoria nodorum)
Length = 177
Score = 33.5 bits (73), Expect = 4.5
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Frame = +1
Query: 16 YTLNRTDVMELYNIKYAIDPTNKIVXEQVDN--VDAFVH-ILEPGQEVFDE 159
Y LN+ + ++LYN++ + T ++V E+ ++ D +H IL Q+VFDE
Sbjct: 90 YRLNKAEYLQLYNLRPSTQVTLELVIEEANSRFTDDQLHEILAKCQQVFDE 140
>UniRef50_Q62HI1 Cluster: Putative uncharacterized protein; n=1;
Burkholderia mallei|Rep: Putative uncharacterized
protein - Burkholderia mallei (Pseudomonas mallei)
Length = 65
Score = 33.1 bits (72), Expect = 6.0
Identities = 17/30 (56%), Positives = 19/30 (63%)
Frame = +3
Query: 96 ASRQCGRICAYPRTGSRSVRRNAXPVPPIS 185
A R CGR A PR+GSRSV R +P IS
Sbjct: 34 ADRACGRT-AEPRSGSRSVSRQGIHIPEIS 62
>UniRef50_UPI00015B6255 Cluster: PREDICTED: similar to GA21569-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA21569-PA - Nasonia vitripennis
Length = 4465
Score = 32.7 bits (71), Expect = 7.9
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 517 NGVRVEKL-RPNMSVYGTVQLPYDKIKRHALEQEK 618
NG ++ L R N S+YGT YD++KRHA +K
Sbjct: 4421 NGGKMNSLARSNASIYGTKDDLYDRLKRHAYPGKK 4455
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,011,494
Number of Sequences: 1657284
Number of extensions: 12555533
Number of successful extensions: 33056
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 32096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33034
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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