Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12b13
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    24   0.98 
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    23   1.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    23   1.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    23   1.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   4.0  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   4.0  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   4.0  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   4.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   6.9  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.9  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.9  
DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory pro...    21   9.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.1  

>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 24.2 bits (50), Expect = 0.98
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -3

Query: 144 NPHIYHLASLLRLF*VPEQLLTTVRRPPW 58
           NP I  L + +  + VPE  ++T  RP W
Sbjct: 384 NPLINILYANMNSYSVPEPTISTTPRPEW 412


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 164 PGIYVIPIRISIILRAYSDYFRCQSSY*P 78
           P +Y+IP+ + +I   + + F  ++SY P
Sbjct: 8   PTLYLIPVSVILISVGWWENFVSETSYLP 36


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 164 PGIYVIPIRISIILRAYSDYFRCQSSY*P 78
           P +Y+IP+ + +I   + + F  ++SY P
Sbjct: 241 PTLYLIPVSVILISVGWWENFVSETSYLP 269


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.4 bits (48), Expect = 1.7
 Identities = 9/29 (31%), Positives = 18/29 (62%)
 Frame = -1

Query: 164 PGIYVIPIRISIILRAYSDYFRCQSSY*P 78
           P +Y+IP+ + +I   + + F  ++SY P
Sbjct: 241 PTLYLIPVSVILISVGWWENFVSETSYLP 269


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/27 (29%), Positives = 10/27 (37%)
 Frame = +3

Query: 354 NCTAPGCCVPKCFAEKGNRGFPGSPGP 434
           +C    C +P CF        PG   P
Sbjct: 154 DCDPTQCVLPDCFCSADGTRIPGQLEP 180


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 8/27 (29%), Positives = 10/27 (37%)
 Frame = +3

Query: 354 NCTAPGCCVPKCFAEKGNRGFPGSPGP 434
           +C    C +P CF        PG   P
Sbjct: 161 DCDPTQCVLPDCFCSADGTRIPGQLEP 187


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -2

Query: 610 PWSPGDP*IPILPANPFAPVLP-LSPLGPRGPCGP 509
           P +PG   IP +P  P+  +   +SP   R  CGP
Sbjct: 119 PAAPGGQPIPDIPRYPWMSITDWMSPF-DRVVCGP 152


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 13/35 (37%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
 Frame = -2

Query: 610 PWSPGDP*IPILPANPFAPVLP-LSPLGPRGPCGP 509
           P +PG   IP +P  P+  +   +SP   R  CGP
Sbjct: 178 PAAPGGQPIPDIPRYPWMSITDWMSPF-DRVVCGP 211


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/22 (31%), Positives = 9/22 (40%)
 Frame = +3

Query: 357 CTAPGCCVPKCFAEKGNRGFPG 422
           C    C +P CF  +     PG
Sbjct: 163 CDPAVCVLPDCFCSEDGTTIPG 184


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 65  HHGTKRAAPESRAR 24
           HH T++  PE R R
Sbjct: 334 HHATRKMGPEFRER 347


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -1

Query: 65  HHGTKRAAPESRAR 24
           HH T++  PE R R
Sbjct: 334 HHATRKMGPEFRER 347


>DQ855494-1|ABH88181.1|   99|Tribolium castaneum chemosensory
           protein 8 protein.
          Length = 99

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -3

Query: 294 ALILVPVLIGVVYR 253
           +L++V +LIGVVY+
Sbjct: 6   SLVVVVLLIGVVYQ 19


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
 Frame = +3

Query: 144  WNNIYSRDLP---PTNWPREVAPDTERP 218
            WN   + + P   PT W   + P +E+P
Sbjct: 1358 WNPGSTTNYPEWQPTEWHPPIPPTSEKP 1385


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,063
Number of Sequences: 336
Number of extensions: 4028
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)