Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12a13
         (676 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.3  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    22   5.3  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   5.3  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.2  
AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    21   9.2  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.2  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   9.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.2  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 128 LFSWRPSKETKGGG 169
           + SWR S + KGGG
Sbjct: 513 IISWRSSDDAKGGG 526


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -1

Query: 187 LRSLDPSASFCFF 149
           +  LDPSA +C F
Sbjct: 56  ITDLDPSADYCLF 68


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 199 TPYLLRSLDPSASFCF 152
           TPY  +S  PSAS  F
Sbjct: 2   TPYFTQSTSPSASEAF 17


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 292 YYNKQSTKPEASTLLLHYS 236
           YYN  S  P A  +  HYS
Sbjct: 22  YYNYTSDIPNAQQMPPHYS 40


>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 397 VFLLRILSRVLLYRRSWLLHHVRRYYLLPIDKLVI 501
           VF+L  L    L R SW    +  + L+  +KLV+
Sbjct: 142 VFMLIALGEHWLSRYSWAKVFLVEHILVQTNKLVL 176


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +1

Query: 397 VFLLRILSRVLLYRRSWLLHHVRRYYLLPIDKLVI 501
           VF+L  L    L R SW    +  + L+  +KLV+
Sbjct: 142 VFMLIALGEHWLSRYSWAKVFLVEHILVQTNKLVL 176


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 292 YYNKQSTKPEASTLLLHYS 236
           YYN  S  P A  +  HYS
Sbjct: 22  YYNYTSDIPNAQQMPPHYS 40


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -1

Query: 292 YYNKQSTKPEASTLLLHYS 236
           YYN  S  P A  +  HYS
Sbjct: 22  YYNYTSDIPNAQQMPPHYS 40


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,100
Number of Sequences: 336
Number of extensions: 3332
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17593745
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)