Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12a13
(676 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 2.0
DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex det... 23 2.0
DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex det... 23 2.0
DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex det... 23 2.0
DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex det... 23 2.0
DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex det... 23 2.0
DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex det... 23 2.0
DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex det... 23 2.0
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 23 2.0
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 23 2.0
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 23 2.0
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 22 4.7
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 8.1
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 141 RHENKTDRRTQVKNKQKGNRSSRSR 67
+++NK + Q NKQ GNR + ++
Sbjct: 465 QNDNKQNGNRQNDNKQNGNRQNDNK 489
Score = 23.4 bits (48), Expect = 2.0
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -2
Query: 141 RHENKTDRRTQVKNKQKGNRSSRSR 67
+++NK + Q NKQ GNR + ++
Sbjct: 475 QNDNKQNGNRQNDNKQNGNRQNGNK 499
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = -2
Query: 141 RHENKTDRRTQVKNKQKGNRSSRSRD 64
+++NK + Q NK+ GNR + +++
Sbjct: 500 QNDNKQNGNRQNDNKRNGNRQNDNQN 525
Score = 21.4 bits (43), Expect = 8.1
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 141 RHENKTDRRTQVKNKQKGNRSSRSR 67
++ N + Q NKQ GNR + +R
Sbjct: 440 QNANNQNADNQNANKQNGNRQNDNR 464
>DQ325067-1|ABD14081.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 103
>DQ325066-1|ABD14080.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 103
>DQ325065-1|ABD14079.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 103
>DQ325064-1|ABD14078.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 103
>DQ325063-1|ABD14077.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 103
>DQ325062-1|ABD14076.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 103
>DQ325061-1|ABD14075.1| 152|Apis mellifera complementary sex
determiner protein.
Length = 152
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 60 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 103
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 352
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 352
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 352
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 352
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 352
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 352
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 23.4 bits (48), Expect = 2.0
Identities = 11/44 (25%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + RE ++ + ER + HR + + +P+YY +P
Sbjct: 309 RETSRERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 352
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 22.2 bits (45), Expect = 4.7
Identities = 10/44 (22%), Positives = 21/44 (47%)
Frame = -1
Query: 397 RGSIRESTQRKLERKHANAHRSPLHALVLSLYIPLYYNKQSTKP 266
R + +E ++ + ER + HR + + +P+YY +P
Sbjct: 293 RETSKERSRDRRERGRSREHRIIPSHYIEQIPVPVYYGNFPPRP 336
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.4 bits (43), Expect = 8.1
Identities = 7/26 (26%), Positives = 16/26 (61%)
Frame = -2
Query: 141 RHENKTDRRTQVKNKQKGNRSSRSRD 64
RH +K+D + ++ + + SS+S +
Sbjct: 433 RHSSKSDNQNNNQHNDQAHHSSKSNN 458
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 189,004
Number of Sequences: 438
Number of extensions: 4336
Number of successful extensions: 26
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20464920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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