Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc12a06
         (461 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    24   0.79 
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   1.8  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   1.8  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   5.6  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    20   9.7  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    20   9.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.8 bits (49), Expect = 0.79
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +3

Query: 165 SPNIPFITTIFLCIFYKDR 221
           S N   + T+F C+FY+++
Sbjct: 85  SANASGVATVFFCLFYQNK 103



 Score = 21.0 bits (42), Expect = 5.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 296 LRYYSCGFYLLN 261
           L + +CGF+L+N
Sbjct: 342 LEFSACGFFLIN 353


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 97  ACHHIMVKTVYYSVAENGAFGTGRQISP 180
           AC +  +  V Y V    A  TGR++SP
Sbjct: 320 ACTNSCMNPVVYGVFNIRARRTGRKVSP 347


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 1.8
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = +1

Query: 97  ACHHIMVKTVYYSVAENGAFGTGRQISP 180
           AC +  +  V Y V    A  TGR++SP
Sbjct: 320 ACTNSCMNPVVYGVFNIRARRTGRKVSP 347


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 296 LRYYSCGFYLLN 261
           L + +CGF+L+N
Sbjct: 167 LEFSACGFFLIN 178


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -1

Query: 350 LKTSAPLRRLLYL*NTSILRYYSCGFYLLN 261
           LKT   ++ L+     +  R+Y+  F+++N
Sbjct: 299 LKTGDEIQDLISTIKDNFPRFYAARFFVIN 328


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 20.2 bits (40), Expect = 9.7
 Identities = 8/30 (26%), Positives = 17/30 (56%)
 Frame = -1

Query: 350 LKTSAPLRRLLYL*NTSILRYYSCGFYLLN 261
           LKT   ++ L+     +  R+Y+  F+++N
Sbjct: 299 LKTGDEIQDLISTIKDNFPRFYAARFFVIN 328


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,167
Number of Sequences: 336
Number of extensions: 2491
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10616413
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)