Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc12a03
(751 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 29 0.047
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 26 0.43
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 24 1.3
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 24 1.3
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 1.8
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 23 2.3
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 23 4.0
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 9.3
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 29.1 bits (62), Expect = 0.047
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 120 YNNAPGYVPPTTRDNKMDTSRSNSTNSVAIAPYNKSKEPTLDAGESIWYNKCVDFVQK 293
Y + P Y+ T+D ++ S +N+V A K+ E D + Y++ +VQK
Sbjct: 454 YKSYPNYIDKETKDMNLEISTRPKSNTVENACVLKNTEIFKDKSDWFDYSEVSKWVQK 511
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 25.8 bits (54), Expect = 0.43
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 119 LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRR 250
LQ++ R A +QQ + QQQ + + QQ+Q+ AR R
Sbjct: 1198 LQEQQRNAAMVQQQQQQQQQQQQQQQ--QQQQQQQQQQHQARER 1239
Score = 25.0 bits (52), Expect = 0.76
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Frame = +2
Query: 98 HIHQRANLQQRARVRAAYDARQ--QNGHEPQQQHKLGSDRTVQQEQRTDARRRRIY 259
H Q+ QQ + + +Q Q +PQQQ + QQ+Q+ ++++ Y
Sbjct: 1495 HSSQKTQQQQPQQQQQQQQQQQPQQQSQQPQQQQPQPQQQQQQQQQQQPQQQQKEY 1550
Score = 24.2 bits (50), Expect = 1.3
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 98 HIHQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQR 232
H HQ + Q +A+ + +QQ PQQQ + + QQ+QR
Sbjct: 815 HHHQSTHPQAQAQAQPQQQQQQQQQQ-PQQQQQ--QQQQQQQQQR 856
Score = 23.8 bits (49), Expect = 1.8
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +2
Query: 104 HQRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQR 232
HQ+ + Q +A A+ Q + QQQ + QQ+Q+
Sbjct: 811 HQQLHHHQSTHPQAQAQAQPQQQQQQQQQQPQQQQQQQQQQQQ 853
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.2 bits (50), Expect = 1.3
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = -2
Query: 585 YQRHRCKIFARTPAANLAQTMP-EIYSNRSAGTRPRCLVPTLFATESGGVSWSPPIQ 418
Y + ++ A T + ++ P + + A P + + ++ES VSW PP Q
Sbjct: 1149 YTNYSMQVLAFTSGGDGVKSAPIHCQTEQDAPEAPIAIKALVMSSESILVSWRPPSQ 1205
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 24.2 bits (50), Expect = 1.3
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = +2
Query: 107 QRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQR 232
Q+ + QQ+ + + +A+Q + QQQ + + QQ+Q+
Sbjct: 421 QQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQQQQ 462
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +2
Query: 107 QRANLQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQR 232
Q+ QQ+ + + N +PQQQ + + QQ+Q+
Sbjct: 416 QQMQAQQQHQQQQQQTQHVINAQQPQQQQQQQQQQQQQQQQQ 457
Score = 22.2 bits (45), Expect = 5.3
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = +2
Query: 122 QQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQRTDARRRRIYLVQQ 271
+Q+ +++A +QQ + Q QH + + + QQ+Q+ ++++ QQ
Sbjct: 413 EQQQQMQAQQQHQQQ---QQQTQHVINAQQPQQQQQQQQQQQQQQQQQQQ 459
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 23.8 bits (49), Expect = 1.8
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 129 APGYVPPTTRDNKMD 173
+PGYV P T+ K+D
Sbjct: 113 SPGYVQPPTKHQKLD 127
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 23.4 bits (48), Expect = 2.3
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = -2
Query: 276 HICCTK*IRRRRASVLCSCCTVR 208
+ C ++ RR +LC+CC R
Sbjct: 390 YACWSRDFRRAFVRILCACCPGR 412
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 22.6 bits (46), Expect = 4.0
Identities = 10/38 (26%), Positives = 20/38 (52%)
Frame = +2
Query: 119 LQQRARVRAAYDARQQNGHEPQQQHKLGSDRTVQQEQR 232
+++R R + + R + + QQQ + D+ QQ+ R
Sbjct: 72 MREREREQREHSDRVTSQQQQQQQQQQQQDQQQQQQSR 109
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +2
Query: 152 DARQQNGHEPQQQHKL 199
DAR++ G P+QQ +L
Sbjct: 171 DARKKKGPTPRQQEEL 186
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,393
Number of Sequences: 438
Number of extensions: 4776
Number of successful extensions: 24
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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