Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11p12
         (558 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC108279-1|AAI08280.1|  540|Homo sapiens TEX2 protein protein.         31   3.6  
BC040521-1|AAH40521.1| 1134|Homo sapiens testis expressed 2 prot...    31   3.6  
BC033661-1|AAH33661.2|  421|Homo sapiens TEX2 protein protein.         31   3.6  
AL834251-1|CAD38927.1| 1127|Homo sapiens hypothetical protein pr...    31   3.6  
AK000758-1|BAA91363.1|  577|Homo sapiens protein ( Homo sapiens ...    31   3.6  
AK000369-1|BAA91117.1|  277|Homo sapiens protein ( Homo sapiens ...    31   3.6  
AF220182-1|AAF67647.1|  229|Homo sapiens uncharacterized hypotha...    31   3.6  
AB051525-1|BAB21829.2| 1127|Homo sapiens KIAA1738 protein protein.     31   3.6  

>BC108279-1|AAI08280.1|  540|Homo sapiens TEX2 protein protein.
          Length = 540

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 168 SHETDDGPRVPGGDRLLLPGA 230
           S E DD P   GGD+ LLPGA
Sbjct: 368 SSEEDDAPEPSGGDKQLLPGA 388


>BC040521-1|AAH40521.1| 1134|Homo sapiens testis expressed 2 protein.
          Length = 1134

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 168  SHETDDGPRVPGGDRLLLPGA 230
            S E DD P   GGD+ LLPGA
Sbjct: 962  SSEEDDAPEPSGGDKQLLPGA 982


>BC033661-1|AAH33661.2|  421|Homo sapiens TEX2 protein protein.
          Length = 421

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 168 SHETDDGPRVPGGDRLLLPGA 230
           S E DD P   GGD+ LLPGA
Sbjct: 249 SSEEDDAPEPSGGDKQLLPGA 269


>AL834251-1|CAD38927.1| 1127|Homo sapiens hypothetical protein
            protein.
          Length = 1127

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 168  SHETDDGPRVPGGDRLLLPGA 230
            S E DD P   GGD+ LLPGA
Sbjct: 955  SSEEDDAPEPSGGDKQLLPGA 975


>AK000758-1|BAA91363.1|  577|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20751 fis, clone HEP03911. ).
          Length = 577

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 168 SHETDDGPRVPGGDRLLLPGA 230
           S E DD P   GGD+ LLPGA
Sbjct: 405 SSEEDDAPEPSGGDKQLLPGA 425


>AK000369-1|BAA91117.1|  277|Homo sapiens protein ( Homo sapiens
           cDNA FLJ20362 fis, clone HEP16985. ).
          Length = 277

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 168 SHETDDGPRVPGGDRLLLPGA 230
           S E DD P   GGD+ LLPGA
Sbjct: 105 SSEEDDAPEPSGGDKQLLPGA 125


>AF220182-1|AAF67647.1|  229|Homo sapiens uncharacterized
           hypothalamus protein HT008 protein.
          Length = 229

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 168 SHETDDGPRVPGGDRLLLPGA 230
           S E DD P   GGD+ LLPGA
Sbjct: 58  SSEEDDAPEPSGGDKQLLPGA 78


>AB051525-1|BAB21829.2| 1127|Homo sapiens KIAA1738 protein protein.
          Length = 1127

 Score = 30.7 bits (66), Expect = 3.6
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +3

Query: 168  SHETDDGPRVPGGDRLLLPGA 230
            S E DD P   GGD+ LLPGA
Sbjct: 955  SSEEDDAPEPSGGDKQLLPGA 975


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,179,691
Number of Sequences: 237096
Number of extensions: 898666
Number of successful extensions: 1516
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1516
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)