Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11p10
         (699 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translati...   178   1e-46
AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dp...    24   5.3  

>AJ439060-9|CAD27760.1|  348|Anopheles gambiae putative translation
           initiation factor protein.
          Length = 348

 Score =  178 bits (434), Expect = 1e-46
 Identities = 91/180 (50%), Positives = 122/180 (67%)
 Frame = +1

Query: 160 MSLESIKYTRGSXXXXXXXXXXXQTRYIKVRGVEDGWKVINKMQVRGAPAIAIVGCLSLA 339
           M+LE+IKY  G            +++YI V GV+DGW  I+KMQVRGAPAIAIVGCLSL 
Sbjct: 1   MTLEAIKYKSGQLQILDQLLLPAESKYIPVAGVKDGWSAIHKMQVRGAPAIAIVGCLSLV 60

Query: 340 VELSPDNESSKKNMRQEIEGKLNYLVSARPTAVNIKLAADELINLANTLCADDSISAEIF 519
           VE+      +K  +  EI   L YLV++RPTAVN+KLAAD++     +L A+++++ +  
Sbjct: 61  VEIYDKQYETKAALANEIGEHLQYLVTSRPTAVNLKLAADDVKGQVESLLANETVTVDGM 120

Query: 520 KERFIGSIEDMLTKDIHDNKAIGSFGCEAILKNIDGDSPVRVLTHCNTGSLATAGYGTAL 699
           K+    +IE ML KDI DN+AIG  G   ++K +  D P+++LTHCNTGSLATAGYGTAL
Sbjct: 121 KQE---AIEYMLEKDISDNRAIGDNGANVLVKGV--DRPLKLLTHCNTGSLATAGYGTAL 175


>AY578803-1|AAT07308.1|  474|Anopheles gambiae mothers against Dpp
           protein.
          Length = 474

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 334 VISNPLWLWLVLHGPAFYL 278
           V S P W+ + LHGP  +L
Sbjct: 438 VTSTPCWIEIHLHGPLQWL 456


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 671,293
Number of Sequences: 2352
Number of extensions: 13450
Number of successful extensions: 14
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)