Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11p05
(750 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U24242-1|AAA65111.1| 173|Drosophila melanogaster L71-3 protein. 31 2.2
AY069753-1|AAL39898.2| 179|Drosophila melanogaster LP11175p pro... 31 2.2
AE014296-2555|AAF49599.1| 173|Drosophila melanogaster CG7608-PA... 31 2.2
AY075414-1|AAL68237.1| 1177|Drosophila melanogaster LD36407p pro... 29 5.1
AE014296-272|AAF47505.2| 1544|Drosophila melanogaster CG12090-PA... 29 5.1
AE014296-271|AAN11486.1| 1472|Drosophila melanogaster CG12090-PC... 29 5.1
AE014296-270|AAN11485.1| 1471|Drosophila melanogaster CG12090-PB... 29 5.1
AF291873-1|AAG01548.1| 533|Drosophila melanogaster DNA primase ... 29 6.8
AF160895-1|AAD46835.1| 533|Drosophila melanogaster GM13640p pro... 29 6.8
AE014296-3340|AAF51580.2| 533|Drosophila melanogaster CG5553-PA... 29 6.8
AY119029-1|AAM50889.1| 507|Drosophila melanogaster LP05465p pro... 29 8.9
AE014134-3132|AAF53828.2| 1034|Drosophila melanogaster CG13079-P... 29 8.9
AE014134-2443|AAF53364.2| 620|Drosophila melanogaster CG8942-PA... 29 8.9
>U24242-1|AAA65111.1| 173|Drosophila melanogaster L71-3 protein.
Length = 173
Score = 30.7 bits (66), Expect = 2.2
Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = -1
Query: 696 RCICL*CASVLTIQTGACLSC*PTARCVSRDTCDCRSPTRHASAPRSCLGNCTDILFPPE 517
RC + C +V G + PT+R +R D R P P + T
Sbjct: 83 RCAVINCKNVRNSIDGGVTARPPTSRRTTRRIPDTRRPRTTRRTPTTRRAPTTR---SSR 139
Query: 516 STFRRR---EKNTHRAKRRANPTS*RTCRNP 433
T RRR + T R RR PT+ T R P
Sbjct: 140 RTTRRRAPTTRTTRRTTRRRAPTTRTTTRRP 170
>AY069753-1|AAL39898.2| 179|Drosophila melanogaster LP11175p
protein.
Length = 179
Score = 30.7 bits (66), Expect = 2.2
Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = -1
Query: 696 RCICL*CASVLTIQTGACLSC*PTARCVSRDTCDCRSPTRHASAPRSCLGNCTDILFPPE 517
RC + C +V G + PT+R +R D R P P + T
Sbjct: 89 RCAVINCKNVRNSIDGGVTARPPTSRRTTRRIPDTRRPRTTRRTPTTRRAPTTR---SSR 145
Query: 516 STFRRR---EKNTHRAKRRANPTS*RTCRNP 433
T RRR + T R RR PT+ T R P
Sbjct: 146 RTTRRRAPTTRTTRRTTRRRAPTTRTTTRRP 176
>AE014296-2555|AAF49599.1| 173|Drosophila melanogaster CG7608-PA
protein.
Length = 173
Score = 30.7 bits (66), Expect = 2.2
Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = -1
Query: 696 RCICL*CASVLTIQTGACLSC*PTARCVSRDTCDCRSPTRHASAPRSCLGNCTDILFPPE 517
RC + C +V G + PT+R +R D R P P + T
Sbjct: 83 RCAVINCKNVRNSIDGGVTARPPTSRRTTRRIPDTRRPRTTRRTPTTRRAPTTR---SSR 139
Query: 516 STFRRR---EKNTHRAKRRANPTS*RTCRNP 433
T RRR + T R RR PT+ T R P
Sbjct: 140 RTTRRRAPTTRTTRRTTRRRAPTTRTTTRRP 170
>AY075414-1|AAL68237.1| 1177|Drosophila melanogaster LD36407p protein.
Length = 1177
Score = 29.5 bits (63), Expect = 5.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 519 PVEIKCPYNYRDTTVEQMRVELGNGNRKYRVKHTALLVNKKGTPQFEW 662
PV P RD+ Q E + R YR H + VN+K + + EW
Sbjct: 875 PVTTPVPNFLRDSPAPQSWTETSSNKRVYRQSHLEIDVNQK-SDRMEW 921
>AE014296-272|AAF47505.2| 1544|Drosophila melanogaster CG12090-PA,
isoform A protein.
Length = 1544
Score = 29.5 bits (63), Expect = 5.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 519 PVEIKCPYNYRDTTVEQMRVELGNGNRKYRVKHTALLVNKKGTPQFEW 662
PV P RD+ Q E + R YR H + VN+K + + EW
Sbjct: 1242 PVTTPVPNFLRDSPAPQSWTETSSNKRVYRQSHLEIDVNQK-SDRMEW 1288
>AE014296-271|AAN11486.1| 1472|Drosophila melanogaster CG12090-PC,
isoform C protein.
Length = 1472
Score = 29.5 bits (63), Expect = 5.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 519 PVEIKCPYNYRDTTVEQMRVELGNGNRKYRVKHTALLVNKKGTPQFEW 662
PV P RD+ Q E + R YR H + VN+K + + EW
Sbjct: 1170 PVTTPVPNFLRDSPAPQSWTETSSNKRVYRQSHLEIDVNQK-SDRMEW 1216
>AE014296-270|AAN11485.1| 1471|Drosophila melanogaster CG12090-PB,
isoform B protein.
Length = 1471
Score = 29.5 bits (63), Expect = 5.1
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +3
Query: 519 PVEIKCPYNYRDTTVEQMRVELGNGNRKYRVKHTALLVNKKGTPQFEW 662
PV P RD+ Q E + R YR H + VN+K + + EW
Sbjct: 1169 PVTTPVPNFLRDSPAPQSWTETSSNKRVYRQSHLEIDVNQK-SDRMEW 1215
>AF291873-1|AAG01548.1| 533|Drosophila melanogaster DNA primase
protein.
Length = 533
Score = 29.1 bits (62), Expect = 6.8
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 393 IKNKITS-AVVETVLDCGMFFSSLGLHAASPDAYFSLADGTWIPVEIKCPYNYRDTTVEQ 569
+K K++S + + +D MFF S G + YF L + + I P NY E+
Sbjct: 403 LKTKLSSYGLSASAIDEVMFFVSRGHYQIGCGKYFQLTHNSPVEPSINHPNNY----FEE 458
Query: 570 MRVELGNGNRK 602
++ +GN ++
Sbjct: 459 SQIAMGNRQKR 469
>AF160895-1|AAD46835.1| 533|Drosophila melanogaster GM13640p
protein.
Length = 533
Score = 29.1 bits (62), Expect = 6.8
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 393 IKNKITS-AVVETVLDCGMFFSSLGLHAASPDAYFSLADGTWIPVEIKCPYNYRDTTVEQ 569
+K K++S + + +D MFF S G + YF L + + I P NY E+
Sbjct: 403 LKTKLSSYGLSASAIDEVMFFVSRGHYQIGCGKYFQLTHNSPVEPSINHPNNY----FEE 458
Query: 570 MRVELGNGNRK 602
++ +GN ++
Sbjct: 459 SQIAMGNRQKR 469
>AE014296-3340|AAF51580.2| 533|Drosophila melanogaster CG5553-PA
protein.
Length = 533
Score = 29.1 bits (62), Expect = 6.8
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 393 IKNKITS-AVVETVLDCGMFFSSLGLHAASPDAYFSLADGTWIPVEIKCPYNYRDTTVEQ 569
+K K++S + + +D MFF S G + YF L + + I P NY E+
Sbjct: 403 LKTKLSSYGLSASAIDEVMFFVSRGHYQIGCGKYFQLTHNSPVEPSINHPNNY----FEE 458
Query: 570 MRVELGNGNRK 602
++ +GN ++
Sbjct: 459 SQIAMGNRQKR 469
>AY119029-1|AAM50889.1| 507|Drosophila melanogaster LP05465p
protein.
Length = 507
Score = 28.7 bits (61), Expect = 8.9
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -1
Query: 645 CLSC*PTARCVSRDTCDCRSPTRHASAPRSCLGNCT 538
C C A CV+ + C+C + A + C+ C+
Sbjct: 277 CEKCSDNAHCVAPNQCECFPGYESSGADKKCVPKCS 312
>AE014134-3132|AAF53828.2| 1034|Drosophila melanogaster CG13079-PA
protein.
Length = 1034
Score = 28.7 bits (61), Expect = 8.9
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = +3
Query: 507 GTWIPVEIKCPYNYRDTTVEQMRVELGNGNRKYRVKHTALLVNKKGTPQFEWSKRM 674
G +IP++ + + + TTV + + + + R+ + ALLVN K ++ S M
Sbjct: 552 GNFIPLDFRATSSVKYTTVYRSLMIIEDKEREIEYSNRALLVNLKDNQEYRSSFHM 607
>AE014134-2443|AAF53364.2| 620|Drosophila melanogaster CG8942-PA
protein.
Length = 620
Score = 28.7 bits (61), Expect = 8.9
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = -1
Query: 645 CLSC*PTARCVSRDTCDCRSPTRHASAPRSCLGNCT 538
C C A CV+ + C+C + A + C+ C+
Sbjct: 277 CEKCSDNAHCVAPNQCECFPGYESSGADKKCVPKCS 312
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,892,980
Number of Sequences: 53049
Number of extensions: 821604
Number of successful extensions: 2192
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2065
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2189
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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