Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11o02
(577 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0875 + 32393496-32393881,32395297-32395397,32395493-323956... 148 4e-36
05_04_0447 + 21347786-21347974,21348104-21348169,21348266-213483... 38 0.008
02_05_0448 - 29100674-29100716,29100821-29100902,29101010-291011... 36 0.031
04_04_1663 - 35156098-35156140,35156273-35156354,35156506-351565... 35 0.053
05_01_0108 - 709031-709204,709294-709359,709607-709714,709822-70... 34 0.071
01_07_0363 - 43066250-43066303,43066304-43066411,43066500-430665... 34 0.093
01_06_1459 - 37515753-37515765,37516026-37516107,37516194-375163... 33 0.22
10_08_0674 + 19788198-19789817 32 0.28
03_02_0251 - 6821612-6823405,6823738-6823878 31 0.50
02_05_0294 + 27609656-27611305 30 1.5
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804... 30 1.5
04_04_0779 - 28023735-28024058,28024520-28024618,28024704-280249... 29 2.0
04_04_0853 + 28745953-28747635 29 2.7
05_05_0132 - 22611030-22611908,22612016-22612135,22612644-226128... 29 3.5
02_01_0791 - 5930553-5930802,5931042-5932351 29 3.5
01_06_0847 + 32411521-32411619,32411737-32411851,32412292-324123... 29 3.5
11_06_0661 - 26009838-26010950,26011302-26011802 28 4.6
02_05_0235 - 27068516-27069032,27069697-27069788,27070056-270702... 28 4.6
10_02_0009 + 4128909-4130123 28 6.1
09_04_0042 - 14055885-14056142,14057508-14057774,14057859-140592... 28 6.1
02_03_0371 - 18267986-18268378 28 6.1
01_05_0541 - 23078460-23078597,23078745-23078903,23079264-230793... 28 6.1
05_01_0435 - 3453312-3453527,3455227-3455360,3455544-3455738,345... 27 8.1
02_04_0074 - 19474786-19474812,19475174-19475400,19476362-194764... 27 8.1
>02_05_0875 +
32393496-32393881,32395297-32395397,32395493-32395674,
32396135-32396233,32396311-32396403
Length = 286
Score = 148 bits (358), Expect = 4e-36
Identities = 89/181 (49%), Positives = 116/181 (64%), Gaps = 3/181 (1%)
Frame = +3
Query: 42 RSIARRLCAVKEPTRVTCSINSTATLKT-QVRMYIVEERGSPYTPDYRVFFKDEGG-PIS 215
R AR AV+ RV + +TA L+T ++R +E+G P T DYRVF D GG +S
Sbjct: 24 RRTARLPTAVRFQRRV---LATTALLRTAELRP---KEQGLPETLDYRVFLVDGGGRKVS 77
Query: 216 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 395
P HD+PL A + + VVE+P+ ++AKME++ E+ PIKQD KKGNLR+ +P+
Sbjct: 78 PWHDVPLRAGDG--VFHFVVEIPKESSAKMEVATDESFTPIKQDTKKGNLRY----YPYN 131
Query: 396 GYIWNYGALPQTWENPNHVDPDT-GARGDNDPVDVIEIGERVASRGDVYPVKILGTLALI 572
WNYG PQTWE+P + D GA GDNDPVDV+EIGER A+ GDV VK L LA+I
Sbjct: 132 -INWNYGLFPQTWEDPTLANTDVEGAFGDNDPVDVVEIGERRANIGDVLKVKPLAALAMI 190
Query: 573 D 575
D
Sbjct: 191 D 191
>05_04_0447 +
21347786-21347974,21348104-21348169,21348266-21348373,
21348469-21348534,21348662-21348782,21348880-21348961,
21349052-21349094
Length = 224
Score = 37.5 bits (83), Expect = 0.008
Identities = 31/120 (25%), Positives = 54/120 (45%)
Frame = +3
Query: 216 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 395
P HD+ + D A + N+VVE+ + + K E+ L +K + + + V+PH
Sbjct: 47 PWHDLEIGPD-APAVFNVVVEITKGSKVKYELDKKTGL------IKVDRILYSSVVYPH- 98
Query: 396 GYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVIEIGERVASRGDVYPVKILGTLALID 575
NYG +P+T DNDP+DV+ + + G + +G + +ID
Sbjct: 99 ----NYGFIPRTLCE------------DNDPMDVLVLMQEPVLPGSFLRARAIGLMPMID 142
>02_05_0448 -
29100674-29100716,29100821-29100902,29101010-29101130,
29101481-29101546,29101628-29101735,29102083-29102148,
29102605-29102633,29102773-29102902
Length = 214
Score = 35.5 bits (78), Expect = 0.031
Identities = 31/120 (25%), Positives = 52/120 (43%)
Frame = +3
Query: 216 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 395
P HD+ + A + N VVE+PR + K E+ L +K + + + V+PH
Sbjct: 37 PWHDLEI-GPGAPAVFNCVVEIPRGSKVKYELDKATGL------IKVDRVLYSSVVYPH- 88
Query: 396 GYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVIEIGERVASRGDVYPVKILGTLALID 575
NYG +P+T D DP+DV+ + + G + +G + +ID
Sbjct: 89 ----NYGFIPRT------------LCEDGDPMDVLVLMQEQVVPGCFLRARAIGLMPMID 132
>04_04_1663 -
35156098-35156140,35156273-35156354,35156506-35156575,
35156682-35156747,35156976-35157083,35157328-35157393,
35158451-35158479,35158566-35158692
Length = 196
Score = 34.7 bits (76), Expect = 0.053
Identities = 30/120 (25%), Positives = 53/120 (44%)
Frame = +3
Query: 216 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 395
P HD+ + A + N+VVE+ + + K E+ L +K + + + V+PH
Sbjct: 36 PWHDLEI-GPGAPAVFNVVVEITKGSKVKYELDKKTGL------IKVDRVLYSSVVYPH- 87
Query: 396 GYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVIEIGERVASRGDVYPVKILGTLALID 575
NYG +P+T DNDP+DV+ + + G + +G + +ID
Sbjct: 88 ----NYGFIPRTLCE------------DNDPMDVLVLMQEPVIPGSFLRARAIGLMPMID 131
>05_01_0108 -
709031-709204,709294-709359,709607-709714,709822-709887,
710125-710153,710239-710374
Length = 192
Score = 34.3 bits (75), Expect = 0.071
Identities = 31/120 (25%), Positives = 53/120 (44%)
Frame = +3
Query: 216 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 395
P HD+ + A + N V+E+PR + K E+ L + + + + + V+PH
Sbjct: 39 PWHDLEI-GPGAPTIFNCVIEIPRGSKVKYELDKKTGLIVVDR------VLYSSVVYPH- 90
Query: 396 GYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVIEIGERVASRGDVYPVKILGTLALID 575
NYG +P+T D+DP+DV+ I + G K +G + +ID
Sbjct: 91 ----NYGFIPRTLCE------------DSDPLDVLVIMQEPVIPGCFLRAKAIGLMPMID 134
>01_07_0363 -
43066250-43066303,43066304-43066411,43066500-43066565,
43066787-43066815,43066993-43067131
Length = 131
Score = 33.9 bits (74), Expect = 0.093
Identities = 22/72 (30%), Positives = 36/72 (50%)
Frame = +3
Query: 216 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 395
P HD+ + +A + N V+E+PR + K E+ L VK + + + V+PH
Sbjct: 40 PWHDLEI-GPEAPTIFNCVIEIPRGSKVKYELDKKTGL------VKVDRVLYSSVVYPH- 91
Query: 396 GYIWNYGALPQT 431
NYG +P+T
Sbjct: 92 ----NYGFIPRT 99
>01_06_1459 -
37515753-37515765,37516026-37516107,37516194-37516314,
37516407-37516472,37516558-37516665,37516755-37516820,
37516920-37516948,37517095-37517221
Length = 203
Score = 32.7 bits (71), Expect = 0.22
Identities = 30/120 (25%), Positives = 52/120 (43%)
Frame = +3
Query: 216 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNLRFVNNVFPHR 395
P HD+ AD A + N+VVE+ + + K E+ + + + + V+PH
Sbjct: 36 PWHDLDTGAD-APAVFNVVVEISKGSKVKYELDKKTGF------IMVDRVLYSSVVYPH- 87
Query: 396 GYIWNYGALPQTWENPNHVDPDTGARGDNDPVDVIEIGERVASRGDVYPVKILGTLALID 575
NYG +P+T DNDP+DV+ + + G + +G + +ID
Sbjct: 88 ----NYGFIPRTLCE------------DNDPMDVLVLMQEPVIPGCFLRARAIGLMPMID 131
>10_08_0674 + 19788198-19789817
Length = 539
Score = 32.3 bits (70), Expect = 0.28
Identities = 21/52 (40%), Positives = 26/52 (50%)
Frame = -1
Query: 577 SSMRASVPRIFTGYTSPRLATRSPISMTSTGSLSPLAPVSGST*LGFSQVCG 422
S +R S+P I TG L R ISM G L LA GS +GF+ + G
Sbjct: 55 SILRLSLPMIMTGLI---LYIRPMISMLFLGRLGELALAGGSLAIGFANITG 103
>03_02_0251 - 6821612-6823405,6823738-6823878
Length = 644
Score = 31.5 bits (68), Expect = 0.50
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -1
Query: 568 RASVPRIFTGYTSPRLATRSPISMTSTGSLSPLAPVSGST*LGFSQVCG 422
R SVP TG + +R+ ISM G L LA GS LGF+ + G
Sbjct: 57 RVSVPMAVTGLV---MYSRALISMLFLGRLGELALAGGSLALGFANITG 102
>02_05_0294 + 27609656-27611305
Length = 549
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/52 (38%), Positives = 26/52 (50%)
Frame = -1
Query: 577 SSMRASVPRIFTGYTSPRLATRSPISMTSTGSLSPLAPVSGST*LGFSQVCG 422
S + ++P I TG L RS ISM G L LA GS +GF+ + G
Sbjct: 85 SILGLALPMILTGLL---LYLRSMISMLFLGRLGGLALAGGSLAIGFANITG 133
>01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,
8048455-8048540,8048698-8048983,8049063-8049205,
8049308-8049508,8049626-8049754,8050463-8050738,
8050823-8051098,8051364-8052364,8052452-8052634,
8052865-8052937,8053205-8053313,8053622-8053785
Length = 1093
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 216 PMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLGEALNPIKQDVKKGNL 365
P D W +A+RL+ + T+ K E LG L K+D +KGNL
Sbjct: 893 PYCDNDFWPGEAERLLEKKDDD---TSQKKETQLGRLLRVAKRDDRKGNL 939
>04_04_0779 -
28023735-28024058,28024520-28024618,28024704-28024940,
28025227-28025334,28025427-28025486,28025813-28025888,
28025984-28026144,28026374-28026436,28026543-28026630,
28026872-28027612,28027695-28028239
Length = 833
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = -1
Query: 532 SPRLATRSPISMTSTGSLSPLAPVSG 455
SPR+ + P S +GS+SPL P SG
Sbjct: 320 SPRMTSPGPSSRVHSGSVSPLHPRSG 345
>04_04_0853 + 28745953-28747635
Length = 560
Score = 29.1 bits (62), Expect = 2.7
Identities = 20/52 (38%), Positives = 25/52 (48%)
Frame = -1
Query: 577 SSMRASVPRIFTGYTSPRLATRSPISMTSTGSLSPLAPVSGST*LGFSQVCG 422
S + + P I TG L RS ISM G L LA GS +GF+ + G
Sbjct: 84 SILGLAFPMILTGLL---LYLRSMISMLFLGHLGGLALAGGSLAIGFANITG 132
>05_05_0132 -
22611030-22611908,22612016-22612135,22612644-22612856,
22612968-22613288,22613421-22613504
Length = 538
Score = 28.7 bits (61), Expect = 3.5
Identities = 15/65 (23%), Positives = 27/65 (41%)
Frame = +2
Query: 215 AHARHSTMGRQSSTPRQHGSRST*MDQCENGDQPRGGPQSYQAGRKERQPSVREQRLPSS 394
A R + G + PR+ G R + + RG + + R+ R+P R + +
Sbjct: 378 AELRAARGGERQPGPRREGRRRPPLAAAHDEPAVRGAAEEAEPRRRRRRPGERRRGAADA 437
Query: 395 RLHLE 409
LH +
Sbjct: 438 ELHAD 442
>02_01_0791 - 5930553-5930802,5931042-5932351
Length = 519
Score = 28.7 bits (61), Expect = 3.5
Identities = 11/18 (61%), Positives = 12/18 (66%)
Frame = -2
Query: 405 RCSRDEGRRCSRTEGCLS 352
RCSRD RCSR GC +
Sbjct: 118 RCSRDAFMRCSRLAGCFT 135
>01_06_0847 +
32411521-32411619,32411737-32411851,32412292-32412375,
32412430-32413478,32414690-32416371,32416477-32416586,
32417634-32418430,32418839-32418951,32419147-32419194,
32419425-32419652,32419732-32419829,32419967-32420019
Length = 1491
Score = 28.7 bits (61), Expect = 3.5
Identities = 18/39 (46%), Positives = 22/39 (56%)
Frame = -1
Query: 565 ASVPRIFTGYTSPRLATRSPISMTSTGSLSPLAPVSGST 449
+SVPR +T Y PR + PIS TS S L P GS+
Sbjct: 483 SSVPRDYTSYQLPRESCTRPISGTS----SELEPPFGSS 517
>11_06_0661 - 26009838-26010950,26011302-26011802
Length = 537
Score = 28.3 bits (60), Expect = 4.6
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +3
Query: 336 IKQDVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARG 476
I +D+K N+ N P + ++G L TWE P H D G G
Sbjct: 341 IHRDIKPSNILLDGNWVPR---LTDFG-LALTWEGPGHEDTVVGTYG 383
>02_05_0235 -
27068516-27069032,27069697-27069788,27070056-27070289,
27071569-27071676,27071796-27071855,27072368-27072443,
27072550-27072710,27076919-27076981,27077061-27077148,
27077568-27078308,27078406-27079033,27079314-27079368,
27082073-27083527
Length = 1425
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 532 SPRLATRSPISMTSTGSLSPLAPVSG 455
SPR+ + P S +GS+SPL P +G
Sbjct: 852 SPRMTSPGPSSRVHSGSVSPLHPRAG 877
>10_02_0009 + 4128909-4130123
Length = 404
Score = 27.9 bits (59), Expect = 6.1
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -3
Query: 383 DVVHEPKVAFLYVLLDRIEGLPEADLHFRIGPSRYF--YYHVDEALSFVGP*WNVVHGRY 210
D V KVAF++++ + P + F + ++ Y H + SF G +V HGRY
Sbjct: 123 DGVVPKKVAFMFLVRGELPLRPLWEKFFEGQRTDHYSIYVHAHPSYSFTGSPESVFHGRY 182
>09_04_0042 -
14055885-14056142,14057508-14057774,14057859-14059292,
14059378-14059539,14059642-14059768,14059869-14060200,
14060289-14061083,14061379-14061714,14061791-14062730,
14063338-14063588
Length = 1633
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 432 WENPNHVDPDTGARGDNDPVDVIEI 506
W+ N V PDT G DP D ++I
Sbjct: 282 WQAANFVKPDTKKGGSMDPSDYVKI 306
>02_03_0371 - 18267986-18268378
Length = 130
Score = 27.9 bits (59), Expect = 6.1
Identities = 24/67 (35%), Positives = 28/67 (41%)
Frame = +2
Query: 215 AHARHSTMGRQSSTPRQHGSRST*MDQCENGDQPRGGPQSYQAGRKERQPSVREQRLPSS 394
AHARH Q+ R+HG E P G Q AG R PS RE+ P
Sbjct: 28 AHARHRHAAVQARR-REHGVEVNHRGD-EEIRVPEGPNQDVVAGHDARDPSHREE--PHD 83
Query: 395 RLHLELR 415
L L +R
Sbjct: 84 MLQLLVR 90
>01_05_0541 -
23078460-23078597,23078745-23078903,23079264-23079386,
23079839-23080363,23081240-23081421,23084977-23085072,
23085290-23085485
Length = 472
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/42 (30%), Positives = 20/42 (47%)
Frame = +3
Query: 450 VDPDTGARGDNDPVDVIEIGERVASRGDVYPVKILGTLALID 575
V P G N+P D ++I S + YP+ + G A+ D
Sbjct: 95 VCPAASTIGMNEPNDTLQIFSLKLSSNESYPISVYGIFAVRD 136
>05_01_0435 -
3453312-3453527,3455227-3455360,3455544-3455738,
3455774-3455929,3456300-3456327,3456374-3456637,
3456728-3456868,3457482-3457602,3457886-3458049
Length = 472
Score = 27.5 bits (58), Expect = 8.1
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = -1
Query: 538 YTSPRLATRSPISMTSTGSLSP 473
+ SPR ATR+P++ ++ G+ SP
Sbjct: 11 FASPRHATRAPLAASAAGASSP 32
>02_04_0074 -
19474786-19474812,19475174-19475400,19476362-19476496,
19478662-19479193
Length = 306
Score = 27.5 bits (58), Expect = 8.1
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +3
Query: 345 DVKKGNLRFVNNVFPHRGYIWNYGALPQTWENPNHVDPDTGARGDND 485
DV KG FVN +W G P+ WE+P P+ D D
Sbjct: 71 DVLKGTCVFVN--------VWALGRDPKYWEDPEEFMPERFENSDMD 109
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,369,479
Number of Sequences: 37544
Number of extensions: 335475
Number of successful extensions: 949
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 944
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1340735508
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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