Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11o02
         (577 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein...    31   0.020
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    24   4.1  
AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.    24   4.1  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   7.1  
AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl s...    23   7.1  
AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative apyrase/n...    23   9.4  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    23   9.4  
AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5' nucleo...    23   9.4  
AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein ...    23   9.4  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    23   9.4  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    23   9.4  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    23   9.4  

>Y17704-1|CAA76824.2|  401|Anopheles gambiae hypothetical protein
           protein.
          Length = 401

 Score = 31.5 bits (68), Expect = 0.020
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
 Frame = -3

Query: 416 TVIPDVAAMREDVVHEPKVAFLYVLLDRIEGLPEADLHFRIGPS--RYFYYHVDEALSFV 243
           T + D    R+D + +P   F+++L  ++  L E + H  +     RY+  H+++   F 
Sbjct: 220 TGVFDTRKDRDDYISQPLTVFVHMLRWQLANL-EFEFHLSLAERFPRYYSLHIEQIFFFA 278

Query: 242 GP*WNVVHGR 213
            P W     R
Sbjct: 279 PPHWQKAEKR 288


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 15/55 (27%), Positives = 23/55 (41%)
 Frame = +2

Query: 233 TMGRQSSTPRQHGSRST*MDQCENGDQPRGGPQSYQAGRKERQPSVREQRLPSSR 397
           T+G    +P Q  +      Q     Q +   QS Q  +  +Q   + QR PSS+
Sbjct: 217 TVGGTPPSPEQLQNHQQTAQQSSQQQQQQQQQQSLQQQQLSQQQQQQRQRQPSSQ 271


>AF457551-1|AAL68781.1|  406|Anopheles gambiae calreticulin protein.
          Length = 406

 Score = 23.8 bits (49), Expect = 4.1
 Identities = 9/22 (40%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
 Frame = +3

Query: 423 PQTWENPNHV-DPDTGARGDND 485
           P+ W+ P H+ DPD     D D
Sbjct: 230 PEDWDKPEHIPDPDATKPDDWD 251


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 19/61 (31%), Positives = 23/61 (37%)
 Frame = +2

Query: 251 STPRQHGSRST*MDQCENGDQPRGGPQSYQAGRKERQPSVREQRLPSSRLHLELRCPAAD 430
           +TP + GS     D C  G        +  A  KE   S R   LPSS     L C  A 
Sbjct: 35  TTPTEGGSWHN--DTCYGGGGANSRLVTVPAPAKELTDSSRSGGLPSSSSSSSLSCLLAT 92

Query: 431 L 433
           +
Sbjct: 93  I 93


>AJ439353-1|CAD27923.1| 1127|Anopheles gambiae putative Na-K-Cl
           symporter protein.
          Length = 1127

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = -1

Query: 139 YILT*VFSVAVELIEQVTRVGSLTAHNRLA 50
           YILT V SVAV L+  +  +  L ++  LA
Sbjct: 553 YILTFVISVAVILVGDLNMIAPLISNFFLA 582


>AJ441131-3|CAD29632.1|  568|Anopheles gambiae putative
           apyrase/nucleotidase protein.
          Length = 568

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 356 RQPSVREQRLPSSRLHL 406
           +QPSV EQ  P + +HL
Sbjct: 37  KQPSVSEQLFPLTIIHL 53


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 10/33 (30%), Positives = 19/33 (57%)
 Frame = -1

Query: 538 YTSPRLATRSPISMTSTGSLSPLAPVSGST*LG 440
           YT+  +A  SP+S++S     P + +S  + +G
Sbjct: 781 YTAAAMAAASPLSLSSKAPPHPHSALSSHSPVG 813


>AJ439398-2|CAD28125.1|  568|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 568

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +2

Query: 356 RQPSVREQRLPSSRLHL 406
           +QPSV EQ  P + +HL
Sbjct: 37  KQPSVSEQLFPLTIIHL 53


>AF164153-1|AAD47077.1|  131|Anopheles gambiae ribosomal protein S17
           protein.
          Length = 131

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/31 (29%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -3

Query: 425 RQGTVIPDVAAMREDVVH-EPKVAFLYVLLD 336
           R+   +PDV+A+ +D++  +P+   +   LD
Sbjct: 80  RRDNYVPDVSALEQDIIEVDPETKEMLKHLD 110


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = +3

Query: 213  SPMHDIPLWADKAQRLVNMVVEVPRWTNAKMEISLG 320
            +P  D P  A   + + +++ E PR+ + + E   G
Sbjct: 947  APSPDCPRCAGSVESVAHVMFECPRFADVRAEFLQG 982


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +2

Query: 329 QSYQAGRKERQPSVREQRLPSSR 397
           Q  Q  R+++Q   R+QRLP+ +
Sbjct: 189 QQRQRWRQQQQKQQRQQRLPAQQ 211


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +2

Query: 320 GGPQSYQAGRKERQPSVREQRL 385
           G P+S Q  ++++QP  ++Q+L
Sbjct: 252 GKPRSQQQPQQQQQPQQKQQQL 273


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 585,810
Number of Sequences: 2352
Number of extensions: 12991
Number of successful extensions: 35
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)