Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11o01
(645 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0249 - 15816515-15816868,15817749-15817958,15818051-158182... 113 1e-25
02_04_0540 + 23748610-23748930,23749054-23749157,23749889-237500... 68 7e-12
03_06_0641 - 35232858-35232892,35233066-35233290,35233785-352339... 61 6e-10
02_03_0134 - 15596379-15597689 33 0.26
10_08_0050 + 14469879-14470072,14470620-14471094 30 1.4
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 30 1.4
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 28 5.5
01_07_0112 - 41149461-41151674,41151688-41153265,41154344-411555... 28 5.5
12_01_0107 - 843820-846335,846400-846511 28 7.3
02_05_1183 + 34788219-34788533,34788733-34788930,34789010-347893... 28 7.3
02_04_0532 + 23711530-23711755,23712984-23713093,23713204-237152... 28 7.3
12_01_0650 + 5500662-5501206,5502485-5502563,5503100-5503308,550... 27 9.7
09_01_0136 - 2030523-2031062,2032349-2032534,2032642-2032796,203... 27 9.7
08_02_1547 + 27795664-27795674,27795743-27795892,27796182-277979... 27 9.7
07_03_0301 + 16449586-16449671,16450028-16451135 27 9.7
07_01_0125 - 944207-945778 27 9.7
>07_03_0249 -
15816515-15816868,15817749-15817958,15818051-15818245,
15818318-15818393,15819982-15820021,15820155-15820283,
15820363-15820405
Length = 348
Score = 113 bits (271), Expect = 1e-25
Identities = 59/151 (39%), Positives = 93/151 (61%), Gaps = 3/151 (1%)
Frame = +3
Query: 198 AAAQLLDELMGRHRNTDPNEKI--KKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGACPK 371
A LLDELMG R+ E+ K+ W+DP+ C +M +FCPHDLFVNT+++LG C K
Sbjct: 3 AQRALLDELMGTARDLTEEERKAHKEVRWDDPDVCAAFMARFCPHDLFVNTKSNLGPCMK 62
Query: 372 VHDEEVKELFEKADPSYKKSQYVE-EFLRFCKHMINDVERKIQKGKQRLDLMNSKPEGPP 548
+HD ++KE FE + + E E + C+ ++ D++RKI++G++RL + P PP
Sbjct: 63 IHDLKLKESFESSPRRETHMRRFEAELAQQCEKLVIDLDRKIRRGRERLAQDVAVP--PP 120
Query: 549 MTQAQTEKNQEQVSLLSEKITGLVQEAEEAG 641
+ K EQ+S++ EK+ L+++ EE G
Sbjct: 121 V----IGKTSEQLSIIEEKVKKLLEQIEELG 147
>02_04_0540 +
23748610-23748930,23749054-23749157,23749889-23750063,
23750149-23750212,23750867-23750946,23751128-23751287,
23751415-23751476,23751607-23751666,23751824-23751882,
23752194-23752275,23752691-23752740,23752847-23752980,
23753508-23753590,23754070-23754142,23754461-23754477
Length = 507
Score = 67.7 bits (158), Expect = 7e-12
Identities = 42/135 (31%), Positives = 73/135 (54%), Gaps = 18/135 (13%)
Frame = +3
Query: 183 RMAVLAAAQLLDELMGRHRNTDPNEKIKKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGA 362
R A+ A + LD+LMG +RN D E +K + D + C+ ++ CPHDLF T+ D+G
Sbjct: 56 RCAMDAIRKQLDQLMGANRNGDVREVSRK--YYDRDVCRLFLAGLCPHDLFQLTKMDMGP 113
Query: 363 CPKVHDEEVKELFEKADPS------------YKKSQ------YVEEFLRFCKHMINDVER 488
CPK+H ++++ + PS Y++++ Y E + +I++ ER
Sbjct: 114 CPKMHSLQLRKEYPWRSPSNYSCRVTRVYNRYEEAKAKGMDNYDRELEETIERLISECER 173
Query: 489 KIQKGKQRLDLMNSK 533
KIQ+ +RL+ ++K
Sbjct: 174 KIQRALKRLEEDDAK 188
>03_06_0641 -
35232858-35232892,35233066-35233290,35233785-35233929,
35234295-35234406,35234477-35234535,35234981-35235022,
35235372-35235434,35235636-35235697,35236298-35236451,
35236572-35236651,35237646-35237709,35237791-35237959,
35238002-35238114,35238361-35238507
Length = 489
Score = 61.3 bits (142), Expect = 6e-10
Identities = 28/66 (42%), Positives = 41/66 (62%)
Frame = +3
Query: 198 AAAQLLDELMGRHRNTDPNEKIKKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGACPKVH 377
A + LD LMG +RN D E +K + D + C+ ++ CPHDLF T+ DLG CPKVH
Sbjct: 3 AMRKQLDVLMGANRNGDVREVSRK--YYDRDVCRLFLAGLCPHDLFQLTKMDLGPCPKVH 60
Query: 378 DEEVKE 395
++++
Sbjct: 61 SLQLRK 66
>02_03_0134 - 15596379-15597689
Length = 436
Score = 32.7 bits (71), Expect = 0.26
Identities = 26/80 (32%), Positives = 41/80 (51%)
Frame = +3
Query: 366 PKVHDEEVKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMNSKPEGP 545
PKV+++EV+ L E + + +EE L+ + + + VE K Q L P P
Sbjct: 215 PKVNEQEVELLMEFDEMESISTPSIEEHLQ--ERLPDPVELK-QVDVIAYLLFGDNPSEP 271
Query: 546 PMTQAQTEKNQEQVSLLSEK 605
Q Q +KN+E V L+SE+
Sbjct: 272 ASNQ-QEDKNEEVVELISEE 290
>10_08_0050 + 14469879-14470072,14470620-14471094
Length = 222
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/42 (35%), Positives = 23/42 (54%)
Frame = +2
Query: 479 CRKENTKRKTKIGSNELKTRGPTNDSSTD*EESGTGFIALGK 604
CR+EN +++G EL+ GP + S D E G I +G+
Sbjct: 122 CRRENLGIGSELGGGELENAGPAHSSGRDGGEV-EGLIEMGR 162
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/57 (28%), Positives = 34/57 (59%)
Frame = +3
Query: 468 MINDVERKIQKGKQRLDLMNSKPEGPPMTQAQTEKNQEQVSLLSEKITGLVQEAEEA 638
M+ND+E K + K + L+NS+ + M+ Q +++ ++ L K++G+ +E + A
Sbjct: 1207 MLNDMENKSSEYKSTILLLNSEKD---MSVIQYKQSSLRIYELESKLSGVQEELDNA 1260
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 28.3 bits (60), Expect = 5.5
Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Frame = +3
Query: 381 EEVKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMNSK-PEGPPMTQ 557
+ +KE+ + K+ + +E ++ CK + ERK K ++ L + K + T+
Sbjct: 359 QTLKEMESVYNKHAKRQEDLENNMKSCKDQFKEFERKDVKYREDLKHLKQKIKKLEDKTE 418
Query: 558 AQTEKNQEQVSLLSEKITGLVQEAEE 635
T K E + E + L+ + EE
Sbjct: 419 KDTSKIDESTKEVEES-SSLIPQLEE 443
>01_07_0112 - 41149461-41151674,41151688-41153265,41154344-41155507,
41155807-41156293,41156603-41156759,41157303-41157378
Length = 1891
Score = 28.3 bits (60), Expect = 5.5
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = -2
Query: 434 LRLLI*WVGFLKKLFDFFIVDFRTSTKISSSINEEIMRTELYHVIFAVLRIFPIRLFNFF 255
L +L W+G L L +F I+D T + SS+ TEL L I P
Sbjct: 1693 LEILPEWLGMLVSLEEFIIIDCPKLTFLPSSMKNLTAITELRLDGCKGLEILP------- 1745
Query: 254 VGIGVPVPAHQFI*ELC 204
G+G+ +P +F+ C
Sbjct: 1746 EGLGLHIPLKRFVINDC 1762
>12_01_0107 - 843820-846335,846400-846511
Length = 875
Score = 27.9 bits (59), Expect = 7.3
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 2/82 (2%)
Frame = +3
Query: 306 MVKFC-PHDLFVNTRADLGACPKVHDEEVKELFEKADPSYKKSQYVEEFLRFCKHM-IND 479
+V C P ++ V T+ + H E ++L E+ S S EEF+ ++ +ND
Sbjct: 229 IVAICQPDNISVGTKERVQLYEGFHVESHEDLIEELVRSLSLSDDEEEFVDIAENSELND 288
Query: 480 VERKIQKGKQRLDLMNSKPEGP 545
R Q G R L + +GP
Sbjct: 289 ALRS-QMGSCRFSLGSKMNDGP 309
>02_05_1183 +
34788219-34788533,34788733-34788930,34789010-34789359,
34789463-34789619
Length = 339
Score = 27.9 bits (59), Expect = 7.3
Identities = 11/41 (26%), Positives = 19/41 (46%)
Frame = +3
Query: 240 NTDPNEKIKKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGA 362
N P+ + + W DPE+C+ V + T A++ A
Sbjct: 144 NRSPDAVLDESCWSDPEFCRQKDVSLLHMYCYAKTMAEMAA 184
>02_04_0532 +
23711530-23711755,23712984-23713093,23713204-23715298,
23716092-23716153,23716236-23716277,23716614-23716673,
23716873-23717010,23717333-23717374,23717452-23717574
Length = 965
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 309 VKFCPHDLFVNTRADLGACPKVHDEEVKELFEKADPSYKKSQYVEEFLRFC 461
+ C H L + R D+ + KVHD E+ K P+ + ++E+ +R C
Sbjct: 762 LSLCGHVLAQSLRTDIESHDKVHDP--MEIVPKGAPTKRLRGFMEKRVRRC 810
>12_01_0650 +
5500662-5501206,5502485-5502563,5503100-5503308,
5504396-5505146
Length = 527
Score = 27.5 bits (58), Expect = 9.7
Identities = 38/154 (24%), Positives = 65/154 (42%), Gaps = 2/154 (1%)
Frame = +3
Query: 183 RMAVLAAAQLLDELMGRHRNTDPNEKIKKPNWEDPEYCKYYMVKFCPHDL-FVNTRADLG 359
R AV A +DEL + + EK +K + + + K M + C + ++
Sbjct: 80 RDAVEEAEDAIDEL--EYYDLKEKEKDQKVSHQGSSFTK--MKRKCLQSIKHISVFGKTS 135
Query: 360 ACPKVHDEEVKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMN-SKP 536
CP + +K E D + K V+ FL +++ ++R QR+D MN +
Sbjct: 136 DCPL---KRLKNAMEGLDEAVKG---VDNFLA----LVDQIKRTTLDNSQRVDEMNRTNM 185
Query: 537 EGPPMTQAQTEKNQEQVSLLSEKITGLVQEAEEA 638
+ A +SLL K+ V+EAE+A
Sbjct: 186 AFSVLVFAGKTVATPAISLLVNKLRDAVEEAEDA 219
>09_01_0136 -
2030523-2031062,2032349-2032534,2032642-2032796,
2032917-2033079
Length = 347
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 246 DPNEKIKKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGA 362
DPN+ + W D EYCK +C + T A+ GA
Sbjct: 148 DPNKPVDDTCWSDLEYCKRTENWYC----YAKTVAEQGA 182
>08_02_1547 +
27795664-27795674,27795743-27795892,27796182-27797906,
27799447-27799546,27799657-27800268,27800399-27800521,
27800905-27801039,27801108-27801209,27801716-27801778,
27801854-27802045,27802121-27802258,27802632-27802694,
27803068-27803466
Length = 1270
Score = 27.5 bits (58), Expect = 9.7
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 309 VKFCPHDLFVNTRADLGACPKVHDEEVKELFEKADPSYKKSQYVEEFLRFC 461
V C H + + R+D+ + KVHD E+ K P+ + ++E+ R C
Sbjct: 563 VTLCGHVVAQSLRSDIASVQKVHDP--MEVVPKGAPTKRLRGFLEKGNRRC 611
>07_03_0301 + 16449586-16449671,16450028-16451135
Length = 397
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +3
Query: 345 RADLGACPKVHDEEVKELFEKADPSYKKSQYVEEFLRFCKHMINDVERK 491
+ LG H+E +++LFE+ P + YV E C+ I+ E++
Sbjct: 245 KVGLGKIMNSHEEHMEKLFERLSP-WTPELYVHESHPICQGYIDYFEQR 292
>07_01_0125 - 944207-945778
Length = 523
Score = 27.5 bits (58), Expect = 9.7
Identities = 11/40 (27%), Positives = 22/40 (55%)
Frame = +3
Query: 513 LDLMNSKPEGPPMTQAQTEKNQEQVSLLSEKITGLVQEAE 632
+D +SKP PPM E+ +++ + ++ ++EAE
Sbjct: 21 IDRCSSKPSSPPMAATFMEEKIQRLERMLLRLATAIEEAE 60
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,572,205
Number of Sequences: 37544
Number of extensions: 267845
Number of successful extensions: 748
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 745
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1596695220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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