Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11o01
(645 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical ... 111 4e-25
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 90 1e-18
AC006714-5|AAN84811.1| 224|Caenorhabditis elegans Hypothetical ... 90 1e-18
U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical pr... 52 3e-07
Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical pr... 29 2.1
AF003151-18|AAK18915.1| 160|Caenorhabditis elegans Hypothetical... 29 2.1
Z81565-5|CAB04583.1| 332|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z70267-8|CAA94216.1| 332|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical pr... 29 2.8
U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical pr... 29 2.8
U21317-7|AAL32207.1| 70|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical p... 27 8.6
>AF040642-4|AAN73873.2| 319|Caenorhabditis elegans Hypothetical
protein C50D2.8 protein.
Length = 319
Score = 111 bits (267), Expect = 4e-25
Identities = 52/148 (35%), Positives = 91/148 (61%)
Frame = +3
Query: 198 AAAQLLDELMGRHRNTDPNEKIKKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGACPKVH 377
A A +LDELMG RN + K K ++DP+ C Y++V FCPHD+F+NT+ADLGAC VH
Sbjct: 6 AMAAMLDELMGPKRNVELG-KDTKVTFDDPDICPYFLVGFCPHDMFINTKADLGACQLVH 64
Query: 378 DEEVKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMNSKPEGPPMTQ 557
D+ ++ L+ ++ P Y + + +RF + D +R+I+K K +L M+ G +
Sbjct: 65 DDNLRRLYPES-PEYGQLGFERRLMRFLVQLDEDNQRRIRKNKDKLSGMDD--SGKRKLE 121
Query: 558 AQTEKNQEQVSLLSEKITGLVQEAEEAG 641
+ + Q +++ + + + ++++AE+AG
Sbjct: 122 EEKRQVQLEINSIDDVLKNMIRDAEQAG 149
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 90.2 bits (214), Expect = 1e-18
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Frame = +3
Query: 204 AQLLDELMGRHRNTDPNEKIKKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGACP-KVHD 380
AQ+L+ELMG R+ +P E+ ++ ++DP C ++V FC HD+F NT+ DLG C HD
Sbjct: 6 AQMLNELMGSQRDANPGER-REIRYDDPNVCTDFLVGFCTHDIFRNTKNDLGFCKYTTHD 64
Query: 381 EEVKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMNSKPEGPPMTQA 560
E +K ++ +D ++ + + FL + + DV RKIQK + RL + + + T
Sbjct: 65 ENLKNSYKNSDKKWRMG-FEKRFLERIRRIHEDVRRKIQKHEDRLAVTQGESKSAEETFG 123
Query: 561 QTEKNQEQ-VSLLSEKITGLVQEAEEAG 641
Q EQ L++K+ L+ EA G
Sbjct: 124 QKILEIEQRREQLTKKMEDLMDEAALEG 151
>AC006714-5|AAN84811.1| 224|Caenorhabditis elegans Hypothetical
protein Y119D3B.12b protein.
Length = 224
Score = 90.2 bits (214), Expect = 1e-18
Identities = 51/148 (34%), Positives = 82/148 (55%), Gaps = 2/148 (1%)
Frame = +3
Query: 204 AQLLDELMGRHRNTDPNEKIKKPNWEDPEYCKYYMVKFCPHDLFVNTRADLGACP-KVHD 380
AQ+L+ELMG R+ +P E+ ++ ++DP C ++V FC HD+F NT+ DLG C HD
Sbjct: 6 AQMLNELMGSQRDANPGER-REIRYDDPNVCTDFLVGFCTHDIFRNTKNDLGFCKYTTHD 64
Query: 381 EEVKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMNSKPEGPPMTQA 560
E +K ++ +D ++ + + FL + + DV RKIQK + RL + + + T
Sbjct: 65 ENLKNSYKNSDKKWRMG-FEKRFLERIRRIHEDVRRKIQKHEDRLAVTQGESKSAEETFG 123
Query: 561 QTEKNQEQ-VSLLSEKITGLVQEAEEAG 641
Q EQ L++K+ L+ EA G
Sbjct: 124 QKILEIEQRREQLTKKMEDLMDEAALEG 151
>U21317-6|AAA62527.1| 313|Caenorhabditis elegans Hypothetical
protein B0495.8a protein.
Length = 313
Score = 52.0 bits (119), Expect = 3e-07
Identities = 36/145 (24%), Positives = 73/145 (50%), Gaps = 1/145 (0%)
Frame = +3
Query: 210 LLDELMGRHRNTDPNEKIKKPNWEDPEYCKYYMVKFCPHDLFVNTR-ADLGACPKVHDEE 386
++ +LMG ++ D EK P ++ C+ +++ CPHD+ ++R ++ +C KVH+
Sbjct: 8 MIAQLMGS-QHVDNKEKPSMP-FDHHSVCRAFLLGVCPHDMVPDSRLQNVVSCRKVHEPA 65
Query: 387 VKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMNSKPEGPPMTQAQT 566
K +E+A K Y + +H ++ V+ +I K +++L+ + T
Sbjct: 66 HKADYERAQKE-KDHFYDVDAFEIIEHAVHLVDIEIAKVREKLE-----DDVKTQTSQAA 119
Query: 567 EKNQEQVSLLSEKITGLVQEAEEAG 641
+ +QV+ + EKI V + E+ G
Sbjct: 120 DSKAKQVAEIEEKIAKNVDDIEKLG 144
>Z70684-2|CAA94596.1| 268|Caenorhabditis elegans Hypothetical
protein F28D1.2 protein.
Length = 268
Score = 30.7 bits (66), Expect = 0.92
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Frame = +3
Query: 381 EEVKELFE--KADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQ 509
E+ KELF+ K D + + + + E LR I+D+E++ ++GKQ
Sbjct: 29 EQRKELFDAKKTDSNVEYVECLSEKLRVATERISDLEKETKEGKQ 73
>Z81131-2|CAB03425.1| 349|Caenorhabditis elegans Hypothetical
protein T24D1.3 protein.
Length = 349
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 477 DVERKIQKGKQRLDLM-NSKPEGPPMTQAQTEKNQEQVSLLSEKIT 611
D+ R+I ++ N++PE PP Q +QE+ S S +IT
Sbjct: 108 DISRRIHNPANQIPAAPNTQPEVPPTVQQPESSSQERASPTSPEIT 153
>AF003151-18|AAK18915.1| 160|Caenorhabditis elegans Hypothetical
protein D1007.9 protein.
Length = 160
Score = 29.5 bits (63), Expect = 2.1
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 255 EKIKKPNWEDPEYCKYYMVKFC 320
EK+KK NW C+ ++ +FC
Sbjct: 89 EKLKKKNWATTRDCRQFLAEFC 110
>Z81565-5|CAB04583.1| 332|Caenorhabditis elegans Hypothetical
protein K04C1.6 protein.
Length = 332
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/84 (27%), Positives = 36/84 (42%)
Frame = -2
Query: 509 LFSFLYFPFYIINHMFTEP*KLFNILRLLI*WVGFLKKLFDFFIVDFRTSTKISSSINEE 330
L + Y II H +E + +L I VGF + +F S+ INE
Sbjct: 20 LVLYTYVVIIIIAHKKSESSFRSSFYKLFI--VGFFMNMMTYFNSLISLRLPQSNGINET 77
Query: 329 IMRTELYHVIFAVLRIFPIRLFNF 258
+ L H + IFP+++F+F
Sbjct: 78 LSNFFLTHNEHNMEVIFPVKVFHF 101
>Z70267-8|CAA94216.1| 332|Caenorhabditis elegans Hypothetical
protein K04C1.6 protein.
Length = 332
Score = 29.1 bits (62), Expect = 2.8
Identities = 23/84 (27%), Positives = 36/84 (42%)
Frame = -2
Query: 509 LFSFLYFPFYIINHMFTEP*KLFNILRLLI*WVGFLKKLFDFFIVDFRTSTKISSSINEE 330
L + Y II H +E + +L I VGF + +F S+ INE
Sbjct: 20 LVLYTYVVIIIIAHKKSESSFRSSFYKLFI--VGFFMNMMTYFNSLISLRLPQSNGINET 77
Query: 329 IMRTELYHVIFAVLRIFPIRLFNF 258
+ L H + IFP+++F+F
Sbjct: 78 LSNFFLTHNEHNMEVIFPVKVFHF 101
>U41541-2|ABA54426.1| 526|Caenorhabditis elegans Hypothetical
protein C41A3.2b protein.
Length = 526
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 390 KELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQ---RLDLMNSKPEGPPMTQA 560
KEL K + K+ Q V E R C + E+K+++ K+ L +M+ K E Q
Sbjct: 433 KEL-SKTEQRAKRRQRVREKARLCAEQAKEEEKKVKEQKRIEHDLRIMSMKKEREVKHQL 491
Query: 561 QTEKNQEQV 587
EK + +
Sbjct: 492 DFEKRKRDI 500
>U41541-1|ABA54425.1| 795|Caenorhabditis elegans Hypothetical
protein C41A3.2a protein.
Length = 795
Score = 29.1 bits (62), Expect = 2.8
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = +3
Query: 390 KELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQ---RLDLMNSKPEGPPMTQA 560
KEL K + K+ Q V E R C + E+K+++ K+ L +M+ K E Q
Sbjct: 433 KEL-SKTEQRAKRRQRVREKARLCAEQAKEEEKKVKEQKRIEHDLRIMSMKKEREVKHQL 491
Query: 561 QTEKNQEQV 587
EK + +
Sbjct: 492 DFEKRKRDI 500
>U21317-7|AAL32207.1| 70|Caenorhabditis elegans Hypothetical
protein B0495.8b protein.
Length = 70
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/46 (28%), Positives = 27/46 (58%)
Frame = +3
Query: 210 LLDELMGRHRNTDPNEKIKKPNWEDPEYCKYYMVKFCPHDLFVNTR 347
++ +LMG ++ D EK P ++ C+ +++ CPHD+ ++R
Sbjct: 8 MIAQLMGS-QHVDNKEKPSMP-FDHHSVCRAFLLGVCPHDMVPDSR 51
>Z81136-1|CAB03458.1| 1256|Caenorhabditis elegans Hypothetical
protein W02B8.2 protein.
Length = 1256
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/85 (24%), Positives = 41/85 (48%)
Frame = +3
Query: 381 EEVKELFEKADPSYKKSQYVEEFLRFCKHMINDVERKIQKGKQRLDLMNSKPEGPPMTQA 560
EE+K K + K SQ+ + N +ERK+QK ++ L + + + Q
Sbjct: 169 EELKNKTMKLNE--KNSQFQTKLAEISSENRN-LERKVQKFREELIVKDQRSLEVHQDQE 225
Query: 561 QTEKNQEQVSLLSEKITGLVQEAEE 635
T+K ++V LS+++ L + ++
Sbjct: 226 NTQKVLKEVKQLSDRLDYLTPKRKD 250
>Z75540-6|CAN86598.1| 584|Caenorhabditis elegans Hypothetical
protein F37D6.2c protein.
Length = 584
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +3
Query: 459 CKHMINDVERK---IQKG---KQRLDLMNSKPEGPPMTQAQTEK 572
C+ IND+ERK ++ G K+ L+L P+ P T+A+TE+
Sbjct: 485 CRRSINDIERKREIVRLGSDPKEELELFAVYPQ-PTNTEAETEE 527
>Z75540-3|CAD01084.1| 581|Caenorhabditis elegans Hypothetical
protein F37D6.2b protein.
Length = 581
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +3
Query: 459 CKHMINDVERK---IQKG---KQRLDLMNSKPEGPPMTQAQTEK 572
C+ IND+ERK ++ G K+ L+L P+ P T+A+TE+
Sbjct: 482 CRRSINDIERKREIVRLGSDPKEELELFAVYPQ-PTNTEAETEE 524
>Z75540-2|CAA99848.1| 582|Caenorhabditis elegans Hypothetical
protein F37D6.2a protein.
Length = 582
Score = 27.9 bits (59), Expect = 6.5
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 6/44 (13%)
Frame = +3
Query: 459 CKHMINDVERK---IQKG---KQRLDLMNSKPEGPPMTQAQTEK 572
C+ IND+ERK ++ G K+ L+L P+ P T+A+TE+
Sbjct: 483 CRRSINDIERKREIVRLGSDPKEELELFAVYPQ-PTNTEAETEE 525
>Z92782-12|CAH60765.1| 328|Caenorhabditis elegans Hypothetical
protein F14F8.13 protein.
Length = 328
Score = 27.5 bits (58), Expect = 8.6
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = -2
Query: 518 IQSLFSFLY-FPFYIINHMFTEP*KLFNILRLLI*WVGFLKKLFDFFIVDFRTS 360
+ F F+Y F F+II ++ + F+++ L+ + LK +F F ++ ++S
Sbjct: 94 VSDYFIFIYCFSFFIIFYILHVLQQTFHVILFLLAILNSLKYIFSFLFLNIQSS 147
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,902,826
Number of Sequences: 27780
Number of extensions: 252279
Number of successful extensions: 853
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 827
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 849
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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