Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11n24
         (493 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy cha...    30   3.8  
AC102952-1|AAS07505.1|  453|Homo sapiens Homo sapiens dynein, ax...    30   3.8  
Z82216-2|CAI43051.1|  595|Homo sapiens premature ovarian failure...    29   8.8  
Z82216-1|CAI43050.1|  589|Homo sapiens premature ovarian failure...    29   8.8  
BC017500-1|AAH17500.1|  595|Homo sapiens POF1B protein protein.        29   8.8  
AL117325-2|CAI42101.1|  595|Homo sapiens premature ovarian failu...    29   8.8  
AL117325-1|CAI42100.1|  589|Homo sapiens premature ovarian failu...    29   8.8  
AK025039-1|BAB15055.1|  306|Homo sapiens protein ( Homo sapiens ...    29   8.8  

>AJ320497-1|CAC60121.1| 4523|Homo sapiens axonemal beta heavy chain
           dynein type 11 protein.
          Length = 4523

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +2

Query: 233 YKDFNRRILLIVFKFALNKSASYFPSYKEIIEVAIKRLNKINPDLKSSPRAMLQHYNECL 412
           Y      ++L + K    K +SYFP+ K+I  +A++       D++   R + +H  +CL
Sbjct: 292 YDQLQAPVVLKMVKILTTKQSSYFPTLKDIF-LAVENALLEAQDVELYLRPLRRHI-QCL 349

Query: 413 ENLDNPVT 436
           +  + P T
Sbjct: 350 QETEFPQT 357


>AC102952-1|AAS07505.1|  453|Homo sapiens Homo sapiens dynein,
           axonemal, heavy polypeptide 11 (DNAH11) protein.
          Length = 453

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 18/68 (26%), Positives = 34/68 (50%)
 Frame = +2

Query: 233 YKDFNRRILLIVFKFALNKSASYFPSYKEIIEVAIKRLNKINPDLKSSPRAMLQHYNECL 412
           Y      ++L + K    K +SYFP+ K+I  +A++       D++   R + +H  +CL
Sbjct: 175 YDQLQAPVVLKMVKILTTKQSSYFPTLKDIF-LAVENALLEAQDVELYLRPLRRHI-QCL 232

Query: 413 ENLDNPVT 436
           +  + P T
Sbjct: 233 QETEFPQT 240


>Z82216-2|CAI43051.1|  595|Homo sapiens premature ovarian failure,
           1B protein.
          Length = 595

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 287 KSASYFPSYKEIIEVAIKRLNKINPDLKSSPRAMLQHY 400
           + + +FP    I E  I+++ K+N D    P+A   H+
Sbjct: 154 RGSHFFPGNNVIYEKTIRKVEKLNTDQGCHPQAQCHHH 191


>Z82216-1|CAI43050.1|  589|Homo sapiens premature ovarian failure,
           1B protein.
          Length = 589

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 287 KSASYFPSYKEIIEVAIKRLNKINPDLKSSPRAMLQHY 400
           + + +FP    I E  I+++ K+N D    P+A   H+
Sbjct: 154 RGSHFFPGNNVIYEKTIRKVEKLNTDQGCHPQAQCHHH 191


>BC017500-1|AAH17500.1|  595|Homo sapiens POF1B protein protein.
          Length = 595

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 287 KSASYFPSYKEIIEVAIKRLNKINPDLKSSPRAMLQHY 400
           + + +FP    I E  I+++ K+N D    P+A   H+
Sbjct: 154 RGSHFFPGNNVIYEKTIRKVEKLNTDQGCHPQAQCHHH 191


>AL117325-2|CAI42101.1|  595|Homo sapiens premature ovarian failure,
           1B protein.
          Length = 595

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 287 KSASYFPSYKEIIEVAIKRLNKINPDLKSSPRAMLQHY 400
           + + +FP    I E  I+++ K+N D    P+A   H+
Sbjct: 154 RGSHFFPGNNVIYEKTIRKVEKLNTDQGCHPQAQCHHH 191


>AL117325-1|CAI42100.1|  589|Homo sapiens premature ovarian failure,
           1B protein.
          Length = 589

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 287 KSASYFPSYKEIIEVAIKRLNKINPDLKSSPRAMLQHY 400
           + + +FP    I E  I+++ K+N D    P+A   H+
Sbjct: 154 RGSHFFPGNNVIYEKTIRKVEKLNTDQGCHPQAQCHHH 191


>AK025039-1|BAB15055.1|  306|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21386 fis, clone COL03414. ).
          Length = 306

 Score = 29.1 bits (62), Expect = 8.8
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = +2

Query: 287 KSASYFPSYKEIIEVAIKRLNKINPDLKSSPRAMLQHY 400
           + + +FP    I E  I+++ K+N D    P+A   H+
Sbjct: 154 RGSHFFPGNNVIYEKTIRKVEKLNTDQGCHPQAQCHHH 191


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,171,316
Number of Sequences: 237096
Number of extensions: 1165311
Number of successful extensions: 2390
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2390
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4423060356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)