Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11n04
(741 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 29 0.046
AB264336-1|BAF44091.1| 21|Apis mellifera ecdysone-induced prot... 25 0.75
DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse tr... 23 3.0
DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse tr... 23 3.0
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 23 4.0
AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellif... 23 4.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 5.3
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 22 7.0
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 22 7.0
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 22 7.0
AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protei... 22 7.0
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 21 9.2
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 29.1 bits (62), Expect = 0.046
Identities = 34/115 (29%), Positives = 46/115 (40%), Gaps = 2/115 (1%)
Frame = +2
Query: 221 FSWEHAPTRSLEVDWLDARNICRRHCMDAVSLETPQENEFVKQRIARGNIRYIWTSGRKC 400
++WEH T +DW C AV LET Q N I GN T+
Sbjct: 188 YNWEHKETH---IDWQPEDEECTEATAGAVVLETCQRNS-NNSTITAGNAN---TNASNN 240
Query: 401 NFAGCDRGDLQPPNVNGWFWSGSGAKIGPTTQRNTGD-WSYTG-GYGQAQPDNRE 559
N + + N NG +G+G G + N GD + +TG G+ PD E
Sbjct: 241 N----NNNNNNNNNNNGANDNGNGN--GASNNNNNGDMFCHTGLGHYGHHPDPGE 289
>AB264336-1|BAF44091.1| 21|Apis mellifera ecdysone-induced protein
75 protein.
Length = 21
Score = 25.0 bits (52), Expect = 0.75
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -2
Query: 203 LPVHRGMSNGVLGWHNS 153
LP+ +G+ NGV+ +HN+
Sbjct: 5 LPILKGILNGVVNYHNA 21
>DQ494419-1|ABF55370.1| 127|Apis mellifera telomerase reverse
transcriptase protein.
Length = 127
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 285 QMFLASSQSTSKLRV 241
+MFL S Q TSKL++
Sbjct: 79 RMFLISQQKTSKLKI 93
>DQ494418-1|ABF55369.1| 110|Apis mellifera telomerase reverse
transcriptase protein.
Length = 110
Score = 23.0 bits (47), Expect = 3.0
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 285 QMFLASSQSTSKLRV 241
+MFL S Q TSKL++
Sbjct: 62 RMFLISQQKTSKLKI 76
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 22.6 bits (46), Expect = 4.0
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 456 SGQVREPRSGPPPNVTRAIGLTPVATV 536
SG+ P G PP+ TR L VATV
Sbjct: 438 SGEYEIPAHGLPPSATR-YDLGAVATV 463
>AJ968562-1|CAI91546.1| 998|Apis mellifera protein ( Apis mellifera
ORF for hypotheticalprotein. ).
Length = 998
Score = 22.6 bits (46), Expect = 4.0
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = +3
Query: 492 PNVTRAIGLTPVATVKRSLITEKLLKVTTSPVWRY 596
P V A A SL+ L+ V ++PVWR+
Sbjct: 521 PKVESAFHNAEEAFSPLSLLGGPLVMVCSAPVWRF 555
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 22.2 bits (45), Expect = 5.3
Identities = 9/18 (50%), Positives = 10/18 (55%)
Frame = +1
Query: 46 HQHYRDEPALLPGGSSFV 99
H HYR P L SS+V
Sbjct: 363 HLHYRQPPTLSESYSSYV 380
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 509 RPCYVGWWARSWLPNLTRTNRSHLEAV 429
+PC W AR W +T +++EAV
Sbjct: 299 KPCT--WAARPWQGYMTNNGVNNVEAV 323
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 509 RPCYVGWWARSWLPNLTRTNRSHLEAV 429
+PC W AR W +T +++EAV
Sbjct: 299 KPCT--WAARPWQGYMTNNGVNNVEAV 323
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 21.8 bits (44), Expect = 7.0
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = -2
Query: 509 RPCYVGWWARSWLPNLTRTNRSHLEAV 429
+PC W AR W +T +++EAV
Sbjct: 299 KPCT--WAARPWQGYMTNNGVNNVEAV 323
>AF469010-1|AAL93136.1| 678|Apis mellifera cGMP-dependent protein
kinase foraging protein.
Length = 678
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -2
Query: 728 LETQSXGSVIGQN*VVHHCLRT 663
L T + G V+G+ ++++C RT
Sbjct: 156 LSTLAPGKVLGELAILYNCKRT 177
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 21.4 bits (43), Expect = 9.2
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -2
Query: 263 NPLLSCVLEHVPS*RNTNVVLPVHRG--MSNGVLGWHNSWDLVKLDVSGPQRSIVPRTKL 90
N +LS +L+ T V + G M N + + D ++D GP PRTK
Sbjct: 303 NGMLSHILQKTTLNMLTQVECYKYYGNIMVNAMCAYAKGKDACQMDSGGPVLWQNPRTKR 362
Query: 89 L 87
L
Sbjct: 363 L 363
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,168
Number of Sequences: 438
Number of extensions: 5506
Number of successful extensions: 21
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23144850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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