Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11m24
         (127 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118659-1|AAM50028.1| 1571|Drosophila melanogaster SD09178p pro...    27   2.7  
AE014297-2578|AAF55592.1| 1612|Drosophila melanogaster CG7717-PA...    27   2.7  
AE014297-2577|AAN13787.1| 1571|Drosophila melanogaster CG7717-PB...    27   2.7  
AB069962-1|BAB62892.1| 1497|Drosophila melanogaster mekk1b protein.    27   2.7  
AB069961-1|BAB62891.1| 1571|Drosophila melanogaster mekk1a protein.    27   2.7  

>AY118659-1|AAM50028.1| 1571|Drosophila melanogaster SD09178p protein.
          Length = 1571

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 90   DPAFNRNLNDERFQNLKQQCDEMSS 16
            DP   ++L+D+ F+ LKQQ D   S
Sbjct: 1085 DPQITQHLDDDEFEALKQQMDRCIS 1109


>AE014297-2578|AAF55592.1| 1612|Drosophila melanogaster CG7717-PA,
            isoform A protein.
          Length = 1612

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 90   DPAFNRNLNDERFQNLKQQCDEMSS 16
            DP   ++L+D+ F+ LKQQ D   S
Sbjct: 1126 DPQITQHLDDDEFEALKQQMDRCIS 1150


>AE014297-2577|AAN13787.1| 1571|Drosophila melanogaster CG7717-PB,
            isoform B protein.
          Length = 1571

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 90   DPAFNRNLNDERFQNLKQQCDEMSS 16
            DP   ++L+D+ F+ LKQQ D   S
Sbjct: 1085 DPQITQHLDDDEFEALKQQMDRCIS 1109


>AB069962-1|BAB62892.1| 1497|Drosophila melanogaster mekk1b protein.
          Length = 1497

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 90   DPAFNRNLNDERFQNLKQQCDEMSS 16
            DP   ++L+D+ F+ LKQQ D   S
Sbjct: 1011 DPQITQHLDDDEFEALKQQMDRCIS 1035


>AB069961-1|BAB62891.1| 1571|Drosophila melanogaster mekk1a protein.
          Length = 1571

 Score = 27.5 bits (58), Expect = 2.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 90   DPAFNRNLNDERFQNLKQQCDEMSS 16
            DP   ++L+D+ F+ LKQQ D   S
Sbjct: 1085 DPQITQHLDDDEFEALKQQMDRCIS 1109


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,945,744
Number of Sequences: 53049
Number of extensions: 36875
Number of successful extensions: 126
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 126
length of database: 24,988,368
effective HSP length: 22
effective length of database: 23,821,290
effective search space used: 452604510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)