Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11m21
         (185 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC031482-1|AAH31482.1|  989|Homo sapiens C10orf12 protein protein.     31   0.50 
BC024315-1|AAH24315.1| 1247|Homo sapiens chromosome 10 open read...    31   0.50 
AL442123-2|CAH70916.1| 1247|Homo sapiens chromosome 10 open read...    31   0.50 
AK023084-1|BAB14396.1|  914|Homo sapiens protein ( Homo sapiens ...    31   0.50 
AL117632-1|CAB56023.1|  596|Homo sapiens hypothetical protein pr...    29   2.7  
AF294689-1|AAQ14428.1|  255|Homo sapiens dyad symmetry binding p...    28   6.1  

>BC031482-1|AAH31482.1|  989|Homo sapiens C10orf12 protein protein.
          Length = 989

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +1

Query: 70  DSQIGDLRRDVNTQPSDSSSAHQELRLPQSPHSRR*KK 183
           DS   D  R +  Q SDSSSA  E+++P++P ++R KK
Sbjct: 347 DSSSAD--RCLRNQSSDSSSACLEIKVPKNPSAKRSKK 382


>BC024315-1|AAH24315.1| 1247|Homo sapiens chromosome 10 open reading
           frame 12 protein.
          Length = 1247

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +1

Query: 70  DSQIGDLRRDVNTQPSDSSSAHQELRLPQSPHSRR*KK 183
           DS   D  R +  Q SDSSSA  E+++P++P ++R KK
Sbjct: 513 DSSSAD--RCLRNQSSDSSSACLEIKVPKNPSAKRSKK 548


>AL442123-2|CAH70916.1| 1247|Homo sapiens chromosome 10 open reading
           frame 12 protein.
          Length = 1247

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +1

Query: 70  DSQIGDLRRDVNTQPSDSSSAHQELRLPQSPHSRR*KK 183
           DS   D  R +  Q SDSSSA  E+++P++P ++R KK
Sbjct: 513 DSSSAD--RCLRNQSSDSSSACLEIKVPKNPSAKRSKK 548


>AK023084-1|BAB14396.1|  914|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13022 fis, clone NT2RP3000753, weakly similar to
           NEUROFILAMENT TRIPLET H PROTEIN. ).
          Length = 914

 Score = 31.5 bits (68), Expect = 0.50
 Identities = 17/38 (44%), Positives = 25/38 (65%)
 Frame = +1

Query: 70  DSQIGDLRRDVNTQPSDSSSAHQELRLPQSPHSRR*KK 183
           DS   D  R +  Q SDSSSA  E+++P++P ++R KK
Sbjct: 180 DSSSAD--RCLRNQSSDSSSACLEIKVPKNPSAKRSKK 215


>AL117632-1|CAB56023.1|  596|Homo sapiens hypothetical protein
           protein.
          Length = 596

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 13/42 (30%), Positives = 25/42 (59%)
 Frame = +1

Query: 43  VEDLSFRR*DSQIGDLRRDVNTQPSDSSSAHQELRLPQSPHS 168
           V++ + RR   Q+ D++R V  +  ++++ HQ+L   Q  HS
Sbjct: 83  VQEETARREKQQLLDVQRQVALKSEEATATHQQLEEAQKEHS 124


>AF294689-1|AAQ14428.1|  255|Homo sapiens dyad symmetry binding
           protein protein.
          Length = 255

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = -2

Query: 97  HVAGHQFGSLNDERKDLPPSG*YL 26
           H+ G+QF  LNDE K+L     YL
Sbjct: 78  HLVGYQFSGLNDEPKNLVSETAYL 101


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,793,031
Number of Sequences: 237096
Number of extensions: 370052
Number of successful extensions: 735
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 735
length of database: 76,859,062
effective HSP length: 41
effective length of database: 67,138,126
effective search space used: 1342762520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)