Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11m21
         (185 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   1.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    21   1.8  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   1.8  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   1.8  
AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.                20   2.4  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    19   4.1  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    19   4.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    19   4.1  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    19   4.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    19   4.1  
DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated...    19   5.4  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    19   5.4  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    19   7.2  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    18   9.5  
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              18   9.5  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/27 (25%), Positives = 13/27 (48%)
 Frame = -1

Query: 167 ECGDCGSRSS*CADDESEGCVFTSRRR 87
           EC  C S++  C   +   C +T + +
Sbjct: 436 ECKTCNSKTKCCFAQDDGLCPYTLKHK 462


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 169 ENAGIVVAEVLDALMMNQKVACSHHVAGHQFGSLND 62
           +NAGI + +    L + Q +   HH A  + G+  D
Sbjct: 491 KNAGIWMIDFAKTLPLPQHLPRIHHDAEWKVGNHED 526


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 169 ENAGIVVAEVLDALMMNQKVACSHHVAGHQFGSLND 62
           +NAGI + +    L + Q +   HH A  + G+  D
Sbjct: 406 KNAGIWMIDFAKTLPLPQHLPRIHHDAEWKVGNHED 441


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = -2

Query: 169 ENAGIVVAEVLDALMMNQKVACSHHVAGHQFGSLND 62
           +NAGI + +    L + Q +   HH A  + G+  D
Sbjct: 725 KNAGIWMIDFAKTLPLPQHLPRIHHDAEWKVGNHED 760


>AB183889-1|BAD86829.1|  316|Apis mellifera Mos protein.
          Length = 316

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = -2

Query: 172 CENAGIVVAEV 140
           C NAGIV A+V
Sbjct: 171 CHNAGIVHADV 181


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 112 VACSHHVAGHQFGSLNDERKDL 47
           +AC+H   G       +ERK++
Sbjct: 14  IACTHSFPGAHDEDSKEERKNV 35


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 112 VACSHHVAGHQFGSLNDERKDL 47
           +AC+H   G       +ERK++
Sbjct: 14  IACTHSFPGAHDEDSKEERKNV 35


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/20 (35%), Positives = 11/20 (55%)
 Frame = -2

Query: 94  VAGHQFGSLNDERKDLPPSG 35
           + G +FG +   +  LPP G
Sbjct: 639 IGGGEFGDVCRGKLKLPPDG 658


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = -2

Query: 112 VACSHHVAGHQFGSLNDERKDL 47
           +AC+H   G       +ERK++
Sbjct: 14  IACTHSFPGAHDEDSKEERKNV 35


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 19.4 bits (38), Expect = 4.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +1

Query: 109 QPSDSSSAHQELRLPQSPHSRR*K 180
           QP+  S    EL    SPH+ R K
Sbjct: 5   QPNRPSYCTWELNATNSPHTCRTK 28


>DQ667193-1|ABG75745.1|  510|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 510

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 1   GTVASVYRANITRSVEDLSFRR*DSQI 81
           GTV  +   NIT  +E+L     ++Q+
Sbjct: 27  GTVNDIVSRNITMVLENLLMNYENNQL 53


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 19.0 bits (37), Expect = 5.4
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +2

Query: 122 HHQRIKNFGYHNP 160
           +HQ I   GY NP
Sbjct: 187 NHQLISYAGYKNP 199


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 18.6 bits (36), Expect = 7.2
 Identities = 7/28 (25%), Positives = 14/28 (50%)
 Frame = +1

Query: 88  LRRDVNTQPSDSSSAHQELRLPQSPHSR 171
           LRR+  ++    ++    +  P+ PH R
Sbjct: 88  LRREAESEAEPGNNRPVYIPQPRPPHPR 115


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/28 (25%), Positives = 13/28 (46%)
 Frame = +1

Query: 88  LRRDVNTQPSDSSSAHQELRLPQSPHSR 171
           LRR+   +    ++    +  P+ PH R
Sbjct: 87  LRREAELEAEPGNNRPVYISQPRPPHPR 114



 Score = 18.2 bits (35), Expect = 9.5
 Identities = 7/28 (25%), Positives = 13/28 (46%)
 Frame = +1

Query: 88  LRRDVNTQPSDSSSAHQELRLPQSPHSR 171
           LRR+   +    ++    +  P+ PH R
Sbjct: 143 LRREAELEAEPGNNRPVYISQPRPPHPR 170


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 18.2 bits (35), Expect = 9.5
 Identities = 6/22 (27%), Positives = 14/22 (63%)
 Frame = -2

Query: 118 QKVACSHHVAGHQFGSLNDERK 53
           +++ C  +    QFG ++D+R+
Sbjct: 67  RQLKCYMYCLWEQFGLVDDKRE 88


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,888
Number of Sequences: 438
Number of extensions: 706
Number of successful extensions: 16
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 41
effective length of database: 128,385
effective search space used:  2567700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)