Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11m13
         (330 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450 CY...    24   1.7  
DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.        23   2.3  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    23   3.9  

>AF487534-1|AAL93295.1|  509|Anopheles gambiae cytochrome P450
           CYP6P3 protein.
          Length = 509

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 102 VFFNYILNIKYLLNIFTSKLRE 37
           V ++ ++NIKYL N+    LR+
Sbjct: 355 VTYDVVMNIKYLDNVIDETLRK 376


>DQ974166-1|ABJ52806.1|  494|Anopheles gambiae serpin 6 protein.
          Length = 494

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = -3

Query: 223 IFFQSDIRWRQQHDMHKQHIFKVLV 149
           IF+Q D+  RQQ+ M  + ++  L+
Sbjct: 206 IFYQKDLPMRQQYVMLARSLYGALI 230


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 198 HLISDWKKICFIYY 239
           H +SDW ++ F+Y+
Sbjct: 341 HEMSDWVRVIFLYW 354


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 263,980
Number of Sequences: 2352
Number of extensions: 4866
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 22910151
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)