Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11m10
(707 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BX538161-1|CAD98041.1| 292|Homo sapiens hypothetical protein pr... 33 1.0
BC104881-1|AAI04882.1| 342|Homo sapiens aprataxin, isoform a pr... 33 1.0
BC032650-1|AAH32650.1| 254|Homo sapiens aprataxin protein. 33 1.0
BC001628-1|AAH01628.1| 168|Homo sapiens aprataxin protein. 33 1.0
AY302067-1|AAQ74130.1| 342|Homo sapiens aprataxin protein. 33 1.0
AY208842-1|AAP86332.1| 113|Homo sapiens FHA-HIT aberrant isofor... 33 1.0
AY208841-1|AAP86331.1| 168|Homo sapiens FHA-HIT aberrant isofor... 33 1.0
AY208840-1|AAP86330.1| 254|Homo sapiens FHA-HIT aberrant isofor... 33 1.0
AY208839-1|AAP86329.1| 254|Homo sapiens FHA-HIT aberrant isofor... 33 1.0
AY208838-1|AAP86328.1| 168|Homo sapiens FHA-HIT aberrant isofor... 33 1.0
AY208837-1|AAP86327.1| 342|Homo sapiens FHA-HIT aberrant isofor... 33 1.0
AY208836-1|AAP86326.1| 342|Homo sapiens FHA-HIT aberrant isofor... 33 1.0
AY208835-1|AAP86325.1| 254|Homo sapiens FHA-HIT isoform protein. 33 1.0
AY208834-1|AAP86324.1| 337|Homo sapiens FHA-HIT isoform protein. 33 1.0
AY208833-1|AAP86323.1| 288|Homo sapiens FHA-HIT isoform 2 protein. 33 1.0
AY208832-1|AAP86322.1| 302|Homo sapiens FHA-HIT isoform 1 protein. 33 1.0
AY208831-1|AAP86321.1| 284|Homo sapiens FHA-HIT isoform protein. 33 1.0
AY208830-1|AAP86320.1| 302|Homo sapiens FHA-HIT short isoform p... 33 1.0
AY208829-1|AAP86319.1| 356|Homo sapiens FHA-HIT short isoform p... 33 1.0
AY040777-1|AAK91768.1| 356|Homo sapiens forkhead-associated dom... 33 1.0
AL353717-8|CAI15735.1| 342|Homo sapiens aprataxin protein. 33 1.0
AL353717-7|CAI15734.1| 168|Homo sapiens aprataxin protein. 33 1.0
AL353717-3|CAI15730.1| 306|Homo sapiens aprataxin protein. 33 1.0
AL353717-2|CAI15728.1| 356|Homo sapiens aprataxin protein. 33 1.0
AL353717-1|CAI15729.1| 280|Homo sapiens aprataxin protein. 33 1.0
AL162590-3|CAI15551.1| 306|Homo sapiens aprataxin protein. 33 1.0
AL162590-2|CAI15549.1| 356|Homo sapiens aprataxin protein. 33 1.0
AL162590-1|CAI15550.1| 280|Homo sapiens aprataxin protein. 33 1.0
AK000164-1|BAA90985.1| 168|Homo sapiens protein ( Homo sapiens ... 33 1.0
AJ575566-1|CAE01427.1| 73|Homo sapiens aprataxin protein. 33 1.0
AJ565855-1|CAD92459.1| 193|Homo sapiens aprataxin protein. 33 1.0
AJ565854-1|CAD92458.1| 247|Homo sapiens aprataxin protein. 33 1.0
AJ565853-1|CAD92457.1| 159|Homo sapiens aprataxin protein. 33 1.0
AJ565852-1|CAD92456.1| 159|Homo sapiens aprataxin protein. 33 1.0
AJ565851-1|CAD92455.1| 73|Homo sapiens aprataxin protein. 33 1.0
AJ565850-1|CAD92454.1| 73|Homo sapiens aprataxin protein. 33 1.0
>BX538161-1|CAD98041.1| 292|Homo sapiens hypothetical protein
protein.
Length = 292
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 193 DKYPKARYHWLVLPWTSISSL 213
>BC104881-1|AAI04882.1| 342|Homo sapiens aprataxin, isoform a
protein.
Length = 342
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 193 DKYPKARYHWLVLPWTSISSL 213
>BC032650-1|AAH32650.1| 254|Homo sapiens aprataxin protein.
Length = 254
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 105 DKYPKARYHWLVLPWTSISSL 125
>BC001628-1|AAH01628.1| 168|Homo sapiens aprataxin protein.
Length = 168
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 19 DKYPKARYHWLVLPWTSISSL 39
>AY302067-1|AAQ74130.1| 342|Homo sapiens aprataxin protein.
Length = 342
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 193 DKYPKARYHWLVLPWTSISSL 213
>AY208842-1|AAP86332.1| 113|Homo sapiens FHA-HIT aberrant isoform
protein.
Length = 113
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 14 DKYPKARYHWLVLPWTSISSL 34
>AY208841-1|AAP86331.1| 168|Homo sapiens FHA-HIT aberrant isoform
protein.
Length = 168
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 19 DKYPKARYHWLVLPWTSISSL 39
>AY208840-1|AAP86330.1| 254|Homo sapiens FHA-HIT aberrant isoform
protein.
Length = 254
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 105 DKYPKARYHWLVLPWTSISSL 125
>AY208839-1|AAP86329.1| 254|Homo sapiens FHA-HIT aberrant isoform
protein.
Length = 254
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 105 DKYPKARYHWLVLPWTSISSL 125
>AY208838-1|AAP86328.1| 168|Homo sapiens FHA-HIT aberrant isoform
protein.
Length = 168
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 19 DKYPKARYHWLVLPWTSISSL 39
>AY208837-1|AAP86327.1| 342|Homo sapiens FHA-HIT aberrant isoform
protein.
Length = 342
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 193 DKYPKARYHWLVLPWTSISSL 213
>AY208836-1|AAP86326.1| 342|Homo sapiens FHA-HIT aberrant isoform
protein.
Length = 342
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 193 DKYPKARYHWLVLPWTSISSL 213
>AY208835-1|AAP86325.1| 254|Homo sapiens FHA-HIT isoform protein.
Length = 254
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 105 DKYPKARYHWLVLPWTSISSL 125
>AY208834-1|AAP86324.1| 337|Homo sapiens FHA-HIT isoform protein.
Length = 337
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 188 DKYPKARYHWLVLPWTSISSL 208
>AY208833-1|AAP86323.1| 288|Homo sapiens FHA-HIT isoform 2 protein.
Length = 288
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 139 DKYPKARYHWLVLPWTSISSL 159
>AY208832-1|AAP86322.1| 302|Homo sapiens FHA-HIT isoform 1 protein.
Length = 302
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 153 DKYPKARYHWLVLPWTSISSL 173
>AY208831-1|AAP86321.1| 284|Homo sapiens FHA-HIT isoform protein.
Length = 284
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 135 DKYPKARYHWLVLPWTSISSL 155
>AY208830-1|AAP86320.1| 302|Homo sapiens FHA-HIT short isoform
protein.
Length = 302
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 153 DKYPKARYHWLVLPWTSISSL 173
>AY208829-1|AAP86319.1| 356|Homo sapiens FHA-HIT short isoform
protein.
Length = 356
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 207 DKYPKARYHWLVLPWTSISSL 227
>AY040777-1|AAK91768.1| 356|Homo sapiens forkhead-associated domain
histidine-triad like protein protein.
Length = 356
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 207 DKYPKARYHWLVLPWTSISSL 227
>AL353717-8|CAI15735.1| 342|Homo sapiens aprataxin protein.
Length = 342
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 193 DKYPKARYHWLVLPWTSISSL 213
>AL353717-7|CAI15734.1| 168|Homo sapiens aprataxin protein.
Length = 168
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 19 DKYPKARYHWLVLPWTSISSL 39
>AL353717-3|CAI15730.1| 306|Homo sapiens aprataxin protein.
Length = 306
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 207 DKYPKARYHWLVLPWTSISSL 227
>AL353717-2|CAI15728.1| 356|Homo sapiens aprataxin protein.
Length = 356
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 207 DKYPKARYHWLVLPWTSISSL 227
>AL353717-1|CAI15729.1| 280|Homo sapiens aprataxin protein.
Length = 280
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 135 DKYPKARYHWLVLPWTSISSL 155
>AL162590-3|CAI15551.1| 306|Homo sapiens aprataxin protein.
Length = 306
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 207 DKYPKARYHWLVLPWTSISSL 227
>AL162590-2|CAI15549.1| 356|Homo sapiens aprataxin protein.
Length = 356
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 207 DKYPKARYHWLVLPWTSISSL 227
>AL162590-1|CAI15550.1| 280|Homo sapiens aprataxin protein.
Length = 280
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 135 DKYPKARYHWLVLPWTSISSL 155
>AK000164-1|BAA90985.1| 168|Homo sapiens protein ( Homo sapiens
cDNA FLJ20157 fis, clone COL08833. ).
Length = 168
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 19 DKYPKARYHWLVLPWTSISSL 39
>AJ575566-1|CAE01427.1| 73|Homo sapiens aprataxin protein.
Length = 73
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 19 DKYPKARYHWLVLPWTSISSL 39
>AJ565855-1|CAD92459.1| 193|Homo sapiens aprataxin protein.
Length = 193
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 139 DKYPKARYHWLVLPWTSISSL 159
>AJ565854-1|CAD92458.1| 247|Homo sapiens aprataxin protein.
Length = 247
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 193 DKYPKARYHWLVLPWTSISSL 213
>AJ565853-1|CAD92457.1| 159|Homo sapiens aprataxin protein.
Length = 159
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 105 DKYPKARYHWLVLPWTSISSL 125
>AJ565852-1|CAD92456.1| 159|Homo sapiens aprataxin protein.
Length = 159
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 105 DKYPKARYHWLVLPWTSISSL 125
>AJ565851-1|CAD92455.1| 73|Homo sapiens aprataxin protein.
Length = 73
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 19 DKYPKARYHWLVLPWTSISSL 39
>AJ565850-1|CAD92454.1| 73|Homo sapiens aprataxin protein.
Length = 73
Score = 33.1 bits (72), Expect = 1.0
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +2
Query: 644 DKYPKAKVHYLVLPHEEINSI 706
DKYPKA+ H+LVLP I+S+
Sbjct: 19 DKYPKARYHWLVLPWTSISSL 39
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,868,258
Number of Sequences: 237096
Number of extensions: 1629173
Number of successful extensions: 2497
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 2404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2497
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8231208258
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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