Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11m04
         (635 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     25   0.53 
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    23   2.8  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   3.7  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.7  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   3.7  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   6.5  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   6.5  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    21   8.6  

>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -2

Query: 301 CRHRHMSKWYPNRYR*LCRCPYLSPSCRR 215
           CR+  + +WY    +    CPY +  C R
Sbjct: 57  CRYTFLLEWYHTLSKACYDCPYNTQDCYR 85


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
 Frame = -2

Query: 241 PYLSPSCRRHK-RPRPPKLARTNSTAS*PCKIYRLKNSEINKNLN 110
           PY S     H  + RPP+ +  +++ +  CK+Y   +SE  +N N
Sbjct: 47  PYASSQHHHHHLQARPPQDSPYDASVAAACKLY---SSEGQQNSN 88


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 335 RVTASHLHTWP 367
           ++T +HLH WP
Sbjct: 206 KMTPNHLHIWP 216


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 335 RVTASHLHTWP 367
           ++T +HLH WP
Sbjct: 206 KMTPNHLHIWP 216


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +2

Query: 335 RVTASHLHTWP 367
           ++T +HLH WP
Sbjct: 206 KMTPNHLHIWP 216


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 157 CKIYRLKNSEINKNLNKIIF 98
           C   +LK  EI  ++NK+IF
Sbjct: 288 CDKVQLKIGEIKYSVNKLIF 307


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 10/32 (31%), Positives = 19/32 (59%)
 Frame = -3

Query: 537 AVLFNDLEGEELNIMLYSLVTPFTTNQTLGIK 442
           AVL ++L+ E++ + L S+    T    LG++
Sbjct: 16  AVLIDELKNEDVQLRLNSIKKLSTIALALGVE 47


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +1

Query: 421 TNPENTVFDAKRLIGREWSDQTVQH 495
           T PE     AK +IG+++S   V H
Sbjct: 462 TAPEQVQRAAKCIIGKDYSLPMVNH 486


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,344
Number of Sequences: 336
Number of extensions: 3114
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16397237
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)