Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11l21
         (699 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical ...   103   2e-22
AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical ...   103   2e-22
AF067937-5|AAF99917.2|  422|Caenorhabditis elegans Hypothetical ...    92   4e-19
AC024200-1|AAF35996.1|  196|Caenorhabditis elegans Hypothetical ...    31   0.79 
U97010-6|AAL65797.1|  501|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U97010-5|AAK73903.1|  444|Caenorhabditis elegans Hypothetical pr...    30   1.8  
U97010-4|AAL65798.1|  438|Caenorhabditis elegans Hypothetical pr...    30   1.8  
AC006729-7|AAF60463.1|  157|Caenorhabditis elegans Hypothetical ...    29   2.4  
Z92831-1|CAB07367.1|  332|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AC024810-5|AAF60763.1|  507|Caenorhabditis elegans Hypothetical ...    28   7.4  
Z82055-3|CAB04845.1|  385|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AF016674-7|AAB66126.2|  415|Caenorhabditis elegans C-type lectin...    27   9.8  

>AF067937-7|AAN84819.1|  392|Caenorhabditis elegans Hypothetical
           protein F22F7.1b protein.
          Length = 392

 Score =  103 bits (246), Expect = 2e-22
 Identities = 55/163 (33%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
 Frame = +1

Query: 112 MEKLDLLVLGATGFTGKSTVKFLTELTKEPEYHNVKWGIAGRSEKKLNILLKELSELKIR 291
           M + D++V GA+GFTG   V++L       ++  + + +AGRSEKKL  +L+ +S+   +
Sbjct: 1   MSRYDVVVYGASGFTGAYVVEYLVN---SEQFEGLSFAVAGRSEKKLREVLRNISQKTGK 57

Query: 292 -TSSIVVIKCDISNQTELRNATGRTKILINCTGPHSILGEAVIKSCIETRTHYVDISAEI 468
             S+  VI  D +++  L     +  ++IN  GP+ + GEAV+K+ +E    +VDIS E 
Sbjct: 58  DVSNAAVIVADSADERSLNEMARQANVVINAVGPYRLYGEAVVKAAVENGASHVDISGEP 117

Query: 469 PQIFNAFRNNHNAAEEGNVLIVPSCGLASIPSAAGLMFLQNQF 597
             I    +     A+E  V +V +CG  SIP+  G+ FL+  F
Sbjct: 118 AWIEKMQQKYSKQAKEQGVYVVSACGWDSIPADLGVNFLKKNF 160


>AF067937-6|AAF99915.1|  426|Caenorhabditis elegans Hypothetical
           protein F22F7.1a protein.
          Length = 426

 Score =  103 bits (246), Expect = 2e-22
 Identities = 55/163 (33%), Positives = 91/163 (55%), Gaps = 1/163 (0%)
 Frame = +1

Query: 112 MEKLDLLVLGATGFTGKSTVKFLTELTKEPEYHNVKWGIAGRSEKKLNILLKELSELKIR 291
           M + D++V GA+GFTG   V++L       ++  + + +AGRSEKKL  +L+ +S+   +
Sbjct: 1   MSRYDVVVYGASGFTGAYVVEYLVN---SEQFEGLSFAVAGRSEKKLREVLRNISQKTGK 57

Query: 292 -TSSIVVIKCDISNQTELRNATGRTKILINCTGPHSILGEAVIKSCIETRTHYVDISAEI 468
             S+  VI  D +++  L     +  ++IN  GP+ + GEAV+K+ +E    +VDIS E 
Sbjct: 58  DVSNAAVIVADSADERSLNEMARQANVVINAVGPYRLYGEAVVKAAVENGASHVDISGEP 117

Query: 469 PQIFNAFRNNHNAAEEGNVLIVPSCGLASIPSAAGLMFLQNQF 597
             I    +     A+E  V +V +CG  SIP+  G+ FL+  F
Sbjct: 118 AWIEKMQQKYSKQAKEQGVYVVSACGWDSIPADLGVNFLKKNF 160


>AF067937-5|AAF99917.2|  422|Caenorhabditis elegans Hypothetical
           protein F22F7.2 protein.
          Length = 422

 Score = 91.9 bits (218), Expect = 4e-19
 Identities = 55/184 (29%), Positives = 92/184 (50%), Gaps = 3/184 (1%)
 Frame = +1

Query: 118 KLDLLVLGATGFTGKSTVKFLTELTKEPEYHNVKWGIAGRSEKKLNILLKELSE---LKI 288
           + D+++ GATG TG    + L    K   + N    IAGRSEKKL  +L++L +     +
Sbjct: 4   RYDVVIYGATGVTGGKIFETLISCGK---FDNYSIAIAGRSEKKLEEVLEKLEKSTGTSL 60

Query: 289 RTSSIVVIKCDISNQTELRNATGRTKILINCTGPHSILGEAVIKSCIETRTHYVDISAEI 468
           +T  I ++ CD +N+  +     R K+++N  GP  + GEAV+K+ +E   + +D++ E 
Sbjct: 61  KTR-IGLLVCDSTNEESMGKMARRAKLIVNAVGPFRLHGEAVVKAAVENGANQIDVAGEP 119

Query: 469 PQIFNAFRNNHNAAEEGNVLIVPSCGLASIPSAAGLMFLQNQFKDIPDVVDCYFRFDIPR 648
             I          A+  NV IV +CG  SIP+  G+  L+  F      +D + +     
Sbjct: 120 EWIERMEAKYGQMAKNNNVYIVSACGWDSIPADFGVKLLKRYFDGHLQRIDAFLQLHFGP 179

Query: 649 RSYA 660
             Y+
Sbjct: 180 SGYS 183


>AC024200-1|AAF35996.1|  196|Caenorhabditis elegans Hypothetical
           protein Y71F9AL.11 protein.
          Length = 196

 Score = 31.1 bits (67), Expect = 0.79
 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
 Frame = -2

Query: 323 MSHFMTTMLDVLIFNSESSLSKMLSFFSDRPA-IPHFTL*YS 201
           M+ F+ T + +  F SES  S++  FF ++PA +P+  L +S
Sbjct: 1   MASFLATKVSIFRFLSESRKSEIFQFFIEKPAGLPYLHLQFS 42


>U97010-6|AAL65797.1|  501|Caenorhabditis elegans Hypothetical
           protein W08A12.1a protein.
          Length = 501

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +1

Query: 397 ILGEAVIKSCIETRTHYV---DISAEIPQIFNAFRNNHNAAEEGNVLIVPSCGLASIPSA 567
           +LG  V  S ++T   Y+   D+ A + QI N F N  +A ++ NVLI+   G    PSA
Sbjct: 146 LLGGRVKFSELDTEQSYIFQRDLLATMHQIENTFFNQASAIKDRNVLIICDRGCMD-PSA 204


>U97010-5|AAK73903.1|  444|Caenorhabditis elegans Hypothetical
           protein W08A12.1b protein.
          Length = 444

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +1

Query: 397 ILGEAVIKSCIETRTHYV---DISAEIPQIFNAFRNNHNAAEEGNVLIVPSCGLASIPSA 567
           +LG  V  S ++T   Y+   D+ A + QI N F N  +A ++ NVLI+   G    PSA
Sbjct: 89  LLGGRVKFSELDTEQSYIFQRDLLATMHQIENTFFNQASAIKDRNVLIICDRGCMD-PSA 147


>U97010-4|AAL65798.1|  438|Caenorhabditis elegans Hypothetical
           protein W08A12.1c protein.
          Length = 438

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
 Frame = +1

Query: 397 ILGEAVIKSCIETRTHYV---DISAEIPQIFNAFRNNHNAAEEGNVLIVPSCGLASIPSA 567
           +LG  V  S ++T   Y+   D+ A + QI N F N  +A ++ NVLI+   G    PSA
Sbjct: 83  LLGGRVKFSELDTEQSYIFQRDLLATMHQIENTFFNQASAIKDRNVLIICDRGCMD-PSA 141


>AC006729-7|AAF60463.1|  157|Caenorhabditis elegans Hypothetical
           protein Y24D9A.6 protein.
          Length = 157

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -3

Query: 82  NCRKFAKY-KNVCTFSVTCYSRSTGVLT 2
           NCRKF+ + K++C FS++ Y+ S    T
Sbjct: 60  NCRKFSIFIKSICQFSISIYTSSVWAKT 87


>Z92831-1|CAB07367.1|  332|Caenorhabditis elegans Hypothetical
           protein F22G12.3 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/28 (39%), Positives = 22/28 (78%)
 Frame = +1

Query: 520 NVLIVPSCGLASIPSAAGLMFLQNQFKD 603
           ++L++PS  +ASI + AG+  ++N+FK+
Sbjct: 271 SILLLPSESVASIATNAGMNMIENKFKN 298


>Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 309 DDYAGRSDF*LRKLFK*NVKFFFRSSGNTPLHVMIF 202
           D Y G S+  +RKLF    + + R   N+ LH++IF
Sbjct: 369 DKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIF 404


>Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 309 DDYAGRSDF*LRKLFK*NVKFFFRSSGNTPLHVMIF 202
           D Y G S+  +RKLF    + + R   N+ LH++IF
Sbjct: 369 DKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIF 404


>Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical
           protein H15N14.2b protein.
          Length = 758

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 14/36 (38%), Positives = 21/36 (58%)
 Frame = -1

Query: 309 DDYAGRSDF*LRKLFK*NVKFFFRSSGNTPLHVMIF 202
           D Y G S+  +RKLF    + + R   N+ LH++IF
Sbjct: 303 DKYVGESESNVRKLFADAEEEWRRCGANSGLHIIIF 338


>AC024810-5|AAF60763.1|  507|Caenorhabditis elegans Hypothetical
           protein Y54E10A.6 protein.
          Length = 507

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 7/42 (16%)
 Frame = +1

Query: 520 NVLIVPSCGL----ASIPSAAGLMFL---QNQFKDIPDVVDC 624
           N+L +  C L    +SI S + LM L   +N  K +PDV DC
Sbjct: 48  NLLSLTGCSLHNLSSSIRSCSNLMHLVLPKNDLKQLPDVFDC 89


>Z82055-3|CAB04845.1|  385|Caenorhabditis elegans Hypothetical
           protein T26H2.3 protein.
          Length = 385

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 3/32 (9%)
 Frame = -2

Query: 359 LPVAFLNSV*LLMSHFMT---TMLDVLIFNSE 273
           LP+AF+ ++ +  SHF+     + D+LI NSE
Sbjct: 224 LPLAFIQNLDIFKSHFLAHQYQLNDILIMNSE 255


>AF016674-7|AAB66126.2|  415|Caenorhabditis elegans C-type lectin
           protein 10 protein.
          Length = 415

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 13/29 (44%), Positives = 15/29 (51%)
 Frame = +2

Query: 539 PVVWPLYLLQQDSCSYKINSKIFLTSSTA 625
           P +  L    QDSCSY  N   +  SSTA
Sbjct: 146 PYICELPTTYQDSCSYNYNGYCYTFSSTA 174


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,818,068
Number of Sequences: 27780
Number of extensions: 290538
Number of successful extensions: 779
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)