Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11l19
         (546 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071553-1|AAL49175.1|  227|Drosophila melanogaster RE61993p pro...   166   2e-41
AE014298-1952|AAF48310.1|  227|Drosophila melanogaster CG11134-P...   166   2e-41

>AY071553-1|AAL49175.1|  227|Drosophila melanogaster RE61993p
           protein.
          Length = 227

 Score =  166 bits (403), Expect = 2e-41
 Identities = 81/124 (65%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
 Frame = +1

Query: 115 EHPRKLIPELCNQFYHLGWVTGTGGGISIKQGDKIYIAPSGVQKERMKANDLFVQTIXXX 294
           EHPR LIP LC QFYHLGWVTGTGGG+SIK  D+IYIAPSGVQKERM+  DLFVQ I   
Sbjct: 12  EHPRHLIPSLCRQFYHLGWVTGTGGGMSIKYNDEIYIAPSGVQKERMQPEDLFVQDITGK 71

Query: 295 XXXXXXXXXXXXXSQCTPLFMLAYRMRNAGAVIHTHSPHAVRCTLLY-DKVFEITHQEMI 471
                        SQCTPLFMLAY+ R AGAVIHTHS HAV  TLL+  K F  TH EMI
Sbjct: 72  DLQLPPEIKGLKKSQCTPLFMLAYQHRQAGAVIHTHSQHAVMATLLWPGKTFRCTHLEMI 131

Query: 472 KVLF 483
           K ++
Sbjct: 132 KGVY 135


>AE014298-1952|AAF48310.1|  227|Drosophila melanogaster CG11134-PA
           protein.
          Length = 227

 Score =  166 bits (403), Expect = 2e-41
 Identities = 81/124 (65%), Positives = 88/124 (70%), Gaps = 1/124 (0%)
 Frame = +1

Query: 115 EHPRKLIPELCNQFYHLGWVTGTGGGISIKQGDKIYIAPSGVQKERMKANDLFVQTIXXX 294
           EHPR LIP LC QFYHLGWVTGTGGG+SIK  D+IYIAPSGVQKERM+  DLFVQ I   
Sbjct: 12  EHPRHLIPSLCRQFYHLGWVTGTGGGMSIKYNDEIYIAPSGVQKERMQPEDLFVQDITGK 71

Query: 295 XXXXXXXXXXXXXSQCTPLFMLAYRMRNAGAVIHTHSPHAVRCTLLY-DKVFEITHQEMI 471
                        SQCTPLFMLAY+ R AGAVIHTHS HAV  TLL+  K F  TH EMI
Sbjct: 72  DLQLPPEIKGLKKSQCTPLFMLAYQHRQAGAVIHTHSQHAVMATLLWPGKTFRCTHLEMI 131

Query: 472 KVLF 483
           K ++
Sbjct: 132 KGVY 135


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,065,745
Number of Sequences: 53049
Number of extensions: 404899
Number of successful extensions: 698
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2069139900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)