Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11l10
         (691 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013303-1|AAY67796.1|  532|Homo sapiens RAB11-FIP2 long isoform...    32   2.2  
BC075074-1|AAH75074.1|  512|Homo sapiens RAB11 family interactin...    32   2.2  
BC075073-1|AAH75073.1|  512|Homo sapiens RAB11 family interactin...    32   2.2  
AY037299-1|AAK68635.1|  512|Homo sapiens nRip11 protein.               32   2.2  
AB023158-1|BAA76785.2|  533|Homo sapiens KIAA0941 protein protein.     32   2.2  

>DQ013303-1|AAY67796.1|  532|Homo sapiens RAB11-FIP2 long isoform
           protein.
          Length = 532

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 224 IELRNHPVEPREQGPEGTGSRGDLSDYSGDHLGSLRRSPRTVSPT 90
           I++++ P +P   GP+   S   +SD SG H+ S +    T+  T
Sbjct: 205 IQMKSKPKKPFLLGPQRLSSAHSMSDLSGSHMSSEKLKAGTIGQT 249


>BC075074-1|AAH75074.1|  512|Homo sapiens RAB11 family interacting
           protein 2 (class I) protein.
          Length = 512

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 224 IELRNHPVEPREQGPEGTGSRGDLSDYSGDHLGSLRRSPRTVSPT 90
           I++++ P +P   GP+   S   +SD SG H+ S +    T+  T
Sbjct: 205 IQMKSKPKKPFLLGPQRLSSAHSMSDLSGSHMSSEKLKAGTIGQT 249


>BC075073-1|AAH75073.1|  512|Homo sapiens RAB11 family interacting
           protein 2 (class I) protein.
          Length = 512

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 224 IELRNHPVEPREQGPEGTGSRGDLSDYSGDHLGSLRRSPRTVSPT 90
           I++++ P +P   GP+   S   +SD SG H+ S +    T+  T
Sbjct: 205 IQMKSKPKKPFLLGPQRLSSAHSMSDLSGSHMSSEKLKAGTIGQT 249


>AY037299-1|AAK68635.1|  512|Homo sapiens nRip11 protein.
          Length = 512

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 224 IELRNHPVEPREQGPEGTGSRGDLSDYSGDHLGSLRRSPRTVSPT 90
           I++++ P +P   GP+   S   +SD SG H+ S +    T+  T
Sbjct: 205 IQMKSKPKKPFLLGPQRLSSAHSMSDLSGSHMSSEKLKAGTIGQT 249


>AB023158-1|BAA76785.2|  533|Homo sapiens KIAA0941 protein protein.
          Length = 533

 Score = 31.9 bits (69), Expect = 2.2
 Identities = 14/45 (31%), Positives = 24/45 (53%)
 Frame = -3

Query: 224 IELRNHPVEPREQGPEGTGSRGDLSDYSGDHLGSLRRSPRTVSPT 90
           I++++ P +P   GP+   S   +SD SG H+ S +    T+  T
Sbjct: 226 IQMKSKPKKPFLLGPQRLSSAHSMSDLSGSHMSSEKLKAGTIGQT 270


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,961,796
Number of Sequences: 237096
Number of extensions: 3009393
Number of successful extensions: 12008
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12008
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7895240574
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)