Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11l06
(648 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT022529-1|AAY54945.1| 255|Drosophila melanogaster IP06473p pro... 130 2e-30
AE014296-2036|AAF50005.2| 255|Drosophila melanogaster CG14130-P... 130 2e-30
AY071524-1|AAL49146.1| 160|Drosophila melanogaster RE57135p pro... 36 0.047
AE014298-248|AAF45660.2| 160|Drosophila melanogaster CG14798-PA... 36 0.047
AE014298-247|AAN09055.1| 237|Drosophila melanogaster CG14798-PB... 36 0.047
AE014134-677|AAF51061.1| 3115|Drosophila melanogaster CG3921-PA ... 28 9.5
>BT022529-1|AAY54945.1| 255|Drosophila melanogaster IP06473p
protein.
Length = 255
Score = 130 bits (313), Expect = 2e-30
Identities = 55/112 (49%), Positives = 78/112 (69%)
Frame = +3
Query: 186 QDMQVYPGFVTXXXXXXXXXXXXPYLKRMRYEFDHWDDAIQGFRETERSQFKPENQVILD 365
Q M++ F++ PY+ R+RYEFDHWDDAI GFRETER ++ P+N+ IL+
Sbjct: 48 QHMRIITDFISEPEEQQLHEEIEPYMSRLRYEFDHWDDAIHGFRETERKKWFPKNREILE 107
Query: 366 RVKALAFTTDTLPHVHVLDLAAAGFIKPHIDAVRFCGDVIAGVCLCSSAVMR 521
RV+ +AF +P+VH+LDLA G IKPH+D+ R+CG+ I+G+ L S +VMR
Sbjct: 108 RVRQVAFDGAVMPYVHILDLAPDGVIKPHVDSTRYCGNTISGISLLSDSVMR 159
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 582 YVMKGVARYEFTHAVLGGERSQ 647
Y+M ARY+FTH +L E SQ
Sbjct: 214 YIMSHTARYKFTHEILAKEHSQ 235
>AE014296-2036|AAF50005.2| 255|Drosophila melanogaster CG14130-PA
protein.
Length = 255
Score = 130 bits (313), Expect = 2e-30
Identities = 55/112 (49%), Positives = 78/112 (69%)
Frame = +3
Query: 186 QDMQVYPGFVTXXXXXXXXXXXXPYLKRMRYEFDHWDDAIQGFRETERSQFKPENQVILD 365
Q M++ F++ PY+ R+RYEFDHWDDAI GFRETER ++ P+N+ IL+
Sbjct: 48 QHMRIITDFISEPEEQQLHEEIEPYMSRLRYEFDHWDDAIHGFRETERKKWFPKNREILE 107
Query: 366 RVKALAFTTDTLPHVHVLDLAAAGFIKPHIDAVRFCGDVIAGVCLCSSAVMR 521
RV+ +AF +P+VH+LDLA G IKPH+D+ R+CG+ I+G+ L S +VMR
Sbjct: 108 RVRQVAFDGAVMPYVHILDLAPDGVIKPHVDSTRYCGNTISGISLLSDSVMR 159
Score = 31.1 bits (67), Expect = 1.3
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +3
Query: 582 YVMKGVARYEFTHAVLGGERSQ 647
Y+M ARY+FTH +L E SQ
Sbjct: 214 YIMSHTARYKFTHEILAKEHSQ 235
>AY071524-1|AAL49146.1| 160|Drosophila melanogaster RE57135p
protein.
Length = 160
Score = 35.9 bits (79), Expect = 0.047
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +1
Query: 325 NAASSSQRTKSYWTALKR*PSQPTHYRTCTSWTWPPLGS*SRILTLSD 468
NA S +T+ W + PS +CTSWTW L SR T D
Sbjct: 10 NAESGLPKTRPRWITSREFPSVSRSCPSCTSWTWLTLARSSRTWTTLD 57
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 582 YVMKGVARYEFTHAVLGGERS 644
Y+ +ARYEFTH +L ++S
Sbjct: 96 YIKSALARYEFTHEILARDQS 116
>AE014298-248|AAF45660.2| 160|Drosophila melanogaster CG14798-PA,
isoform A protein.
Length = 160
Score = 35.9 bits (79), Expect = 0.047
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +1
Query: 325 NAASSSQRTKSYWTALKR*PSQPTHYRTCTSWTWPPLGS*SRILTLSD 468
NA S +T+ W + PS +CTSWTW L SR T D
Sbjct: 10 NAESGLPKTRPRWITSREFPSVSRSCPSCTSWTWLTLARSSRTWTTLD 57
Score = 28.7 bits (61), Expect = 7.2
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +3
Query: 582 YVMKGVARYEFTHAVLGGERS 644
Y+ +ARYEFTH +L ++S
Sbjct: 96 YIKSALARYEFTHEILARDQS 116
>AE014298-247|AAN09055.1| 237|Drosophila melanogaster CG14798-PB,
isoform B protein.
Length = 237
Score = 35.9 bits (79), Expect = 0.047
Identities = 18/48 (37%), Positives = 22/48 (45%)
Frame = +1
Query: 325 NAASSSQRTKSYWTALKR*PSQPTHYRTCTSWTWPPLGS*SRILTLSD 468
NA S +T+ W + PS +CTSWTW L SR T D
Sbjct: 87 NAESGLPKTRPRWITSREFPSVSRSCPSCTSWTWLTLARSSRTWTTLD 134
Score = 31.9 bits (69), Expect = 0.77
Identities = 31/153 (20%), Positives = 53/153 (34%), Gaps = 1/153 (0%)
Frame = +3
Query: 189 DMQVYPGFVTXXXXXXXXXXXXPYLKRMRYEFDHWDDAIQGFRETERSQFKPENQVILDR 368
DM+V F+T P++ R+ YE H DD E K + I R
Sbjct: 44 DMRVIRDFITAKEEQLLMREIEPHISRLPYELSHCDDVDTAKLNAESGLPKTRPRWITSR 103
Query: 369 -VKALAFTTDTLPHVHVLDLAAAGFIKPHIDAVRFCGDVIAGVCLCSSAVMRXXXXXXXX 545
+++ + + L LA + +D F + + ++
Sbjct: 104 EFPSVSRSCPSCTSWTWLTLARSSRTWTTLD---FAATPLRALACSATEARDQGSHDFVS 160
Query: 546 XXXXXXXXXXXXYVMKGVARYEFTHAVLGGERS 644
Y+ +ARYEFTH +L ++S
Sbjct: 161 HSEDLLLPQLSLYIKSALARYEFTHEILARDQS 193
>AE014134-677|AAF51061.1| 3115|Drosophila melanogaster CG3921-PA
protein.
Length = 3115
Score = 28.3 bits (60), Expect = 9.5
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +1
Query: 301 PSKASERRNAASSSQRTKSYWTALKR*PSQPTHYRTCTSWTWPP 432
P+ S ++ + +R SY+TA++ + +HYRT PP
Sbjct: 2993 PAVPSSQQATPADMRRPDSYYTAVRSSKAPVSHYRTPRPLAQPP 3036
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,953,851
Number of Sequences: 53049
Number of extensions: 466921
Number of successful extensions: 1269
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1269
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -