Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11k24
         (353 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.       25   0.83 
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    23   2.5  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   3.4  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   4.4  

>EF592176-1|ABQ95972.2|  661|Anopheles gambiae laccase-3 protein.
          Length = 661

 Score = 25.0 bits (52), Expect = 0.83
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
 Frame = -1

Query: 239 LRKCRNLEPKLCIXEPLQKMHHV--PS--DC-KGSRAD 141
           LR+C N +P++C      + +HV  P+  DC KG+  D
Sbjct: 51  LRECDNTQPRICHFSWTMEHYHVMGPACRDCAKGNHTD 88


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 23.4 bits (48), Expect = 2.5
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = +1

Query: 265 SSTPIPNRSDDXKHLXSVDDHF*TRXFET 351
           S++P P RS D     ++DD   ++   T
Sbjct: 173 SASPSPTRSTDLSQTYAIDDELSSKRIRT 201


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 3.4
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 298 YRHYDLESVCWNSIVYLEI 242
           YR+ D+ S+CW ++   E+
Sbjct: 472 YRNADIRSLCWETMFGQEL 490


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = -2

Query: 166 AIVRDHEPTXFNQNYSVIIMGVLTILAVQCWNLYV 62
           A ++DH+      N  +I+     + +V CW+  +
Sbjct: 477 AFLQDHDYAVLKNNNRIILKRYPHLDSVDCWSFEI 511


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 357,297
Number of Sequences: 2352
Number of extensions: 6056
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 25794900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)