Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmnc11k16
         (691 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.    27   0.56 
AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform ...    25   3.0  
AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical prote...    24   3.9  
AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory a...    24   3.9  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   5.2  
AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic acetylch...    23   6.9  
AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.            23   6.9  
DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            23   9.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.1  

>DQ004400-1|AAY21239.1|  144|Anopheles gambiae lysozyme c-5 protein.
          Length = 144

 Score = 27.1 bits (57), Expect = 0.56
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = -2

Query: 414 ECSDNCLGLHNFDIATDYFLFRQLNRRSSRCNTWD----NA*QKRQPYATHCIA 265
           EC   C  L N DI+ D    R + RRS   N+W+    N   K+ P    C A
Sbjct: 89  ECHLKCSSLVNDDISDDMRCARSIYRRSF-FNSWEGWRNNCQGKQLPGVAECFA 141


>AY943929-1|AAX49502.1|  755|Anopheles gambiae laccase-2 isoform B
           protein.
          Length = 755

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 3/30 (10%)
 Frame = -2

Query: 453 NTLPPYLI---NYRNPECSDNCLGLHNFDI 373
           N +PP      + R P+C  NC+  H  DI
Sbjct: 587 NDIPPEQFCNGDNRPPDCGPNCMCTHKVDI 616


>AJ973475-1|CAJ01522.1|  127|Anopheles gambiae hypothetical protein
           protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
 Frame = +3

Query: 456 VKIDRLFKESIKKIMDDTEAFEKEQEAERLRAEQTAANA-LLNRRAQTSADDVVNRADAN 632
           +K DRLF    K +MD+        E +++  E    N    + + ++ A  V+N    N
Sbjct: 34  LKSDRLFNNYFKCLMDEGRCTPDGNELKKILPEALQTNCEKCSEKQRSGAIKVINYVIEN 93

Query: 633 ISTAFSDPLPGSSAPRYMY 689
               + D L     P  +Y
Sbjct: 94  RKEQW-DALQKKYDPENLY 111


>AJ697728-1|CAG26921.1|  127|Anopheles gambiae putative sensory
           appendage protein SAP-2 protein.
          Length = 127

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 19/79 (24%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
 Frame = +3

Query: 456 VKIDRLFKESIKKIMDDTEAFEKEQEAERLRAEQTAANA-LLNRRAQTSADDVVNRADAN 632
           +K DRLF    K +MD+        E +++  E    N    + + ++ A  V+N    N
Sbjct: 34  LKSDRLFNNYFKCLMDEGRCTPDGNELKKILPEALQTNCEKCSEKQRSGAIKVINYVIEN 93

Query: 633 ISTAFSDPLPGSSAPRYMY 689
               + D L     P  +Y
Sbjct: 94  RKEQW-DALQKKYDPENLY 111


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 13/42 (30%), Positives = 19/42 (45%)
 Frame = -2

Query: 225 CSMRPSRWTIPSAAIAVDHLQPTPCWSTCLFFLPN*AFCRQQ 100
           C M   +W + SA    DHL+P    S  + F+    F  Q+
Sbjct: 573 CFMMFFKWIMYSAVTDEDHLKPGCAPSVLIMFINMMLFKNQE 614


>AY705394-1|AAU12503.1|  557|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 1 protein.
          Length = 557

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = -2

Query: 225 CSMRPSRWTIPSAAIAVDHLQPTP 154
           C M+   WT     + + HLQ TP
Sbjct: 162 CFMKFGSWTYDGYMVDLRHLQQTP 185


>AY428512-1|AAR89530.1|  420|Anopheles gambiae EKN1 protein.
          Length = 420

 Score = 23.4 bits (48), Expect = 6.9
 Identities = 8/20 (40%), Positives = 15/20 (75%)
 Frame = -2

Query: 213 PSRWTIPSAAIAVDHLQPTP 154
           P++ + PSA  ++ ++QPTP
Sbjct: 182 PAKASAPSAGKSLSNIQPTP 201


>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +1

Query: 1   IQYNLII*TIPIHC*LRVWQRKYCPE 78
           I+++ +  T+PIHC +  W     P+
Sbjct: 555 IEWDPLTDTVPIHCWIHPWTELLGPK 580


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 9.1
 Identities = 19/85 (22%), Positives = 42/85 (49%)
 Frame = +3

Query: 42  LITRLAAQILSRNIQTVDVIVDDKTLSLEEKIDTLTSMVLAVNGLPQSPPRVSSSDLAAS 221
           +I+RL + +  R++   D+     T+ L +K  +L S   +     Q   ++ S+   A 
Sbjct: 135 IISRLNSDVQFRSL---DLSKAKTTVRLLKKPPSLDSEWKSSTSTIQLIEQLDSNKQLAI 191

Query: 222 SIKNNSKLVGNDFEMRYNVLRMAVV 296
           +++  SKL+   F  +YN+ ++  +
Sbjct: 192 ALRTESKLMLFRFNNQYNLEKLTTI 216


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 687,043
Number of Sequences: 2352
Number of extensions: 14263
Number of successful extensions: 51
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69831885
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)