Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmnc11k15
(777 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69907-1|CAA49532.1| 136|Homo sapiens P1 gene for c subunit of ... 87 9e-17
D13118-1|BAA02420.1| 136|Homo sapiens ATP synthase subunit c pr... 87 9e-17
CR533449-1|CAG38480.1| 136|Homo sapiens ATP5G1 protein. 87 9e-17
BT007230-1|AAP35894.1| 136|Homo sapiens ATP synthase, H+ transp... 87 9e-17
BC004963-1|AAH04963.1| 136|Homo sapiens ATP synthase, H+ transp... 87 9e-17
X69908-1|CAA49533.1| 141|Homo sapiens protein ( H.sapiens gene ... 86 2e-16
D13119-1|BAA02421.1| 141|Homo sapiens ATP synthase subunit c pr... 86 2e-16
BC020826-1|AAH20826.1| 141|Homo sapiens ATP5G2 protein protein. 86 2e-16
U09813-1|AAA78807.1| 142|Homo sapiens mitochondrial ATP synthas... 82 2e-15
M16453-1|AAA51806.1| 100|Homo sapiens ATP5A protein. 82 2e-15
CR407601-1|CAG28411.1| 142|Homo sapiens ATP5G3 protein. 82 2e-15
BC106881-1|AAI06882.1| 142|Homo sapiens ATP synthase, H+ transp... 82 2e-15
AC096649-1|AAX88970.1| 142|Homo sapiens unknown protein. 82 2e-15
M16439-1|AAA51804.1| 58|Homo sapiens ATP5A protein. 62 2e-09
AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type... 35 0.38
AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein. 35 0.38
AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein. 35 0.38
AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein. 34 0.66
AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo ... 34 0.66
AB011536-1|BAA32464.1| 1364|Homo sapiens MEGF2 protein. 34 0.66
AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar t... 32 2.0
AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar t... 32 2.0
BC132727-1|AAI32728.1| 1214|Homo sapiens transient receptor pote... 31 4.6
AY297045-1|AAP44474.1| 1214|Homo sapiens transient receptor pote... 31 4.6
AY297044-1|AAP44473.1| 1040|Homo sapiens transient receptor pote... 31 4.6
AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form ... 31 4.6
AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form ... 31 4.6
AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form ... 31 4.6
AY046396-1|AAL02142.1| 1040|Homo sapiens TRP-related cation infl... 31 4.6
AK131282-1|BAD18457.1| 872|Homo sapiens protein ( Homo sapiens ... 31 4.6
AK000048-1|BAA90907.1| 1016|Homo sapiens protein ( Homo sapiens ... 31 4.6
AJ575813-1|CAE05941.1| 1214|Homo sapiens transient receptor pote... 31 4.6
AF497623-1|AAM18083.1| 1214|Homo sapiens cation channel TRPM4B p... 31 4.6
AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein. 31 4.6
AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein. 31 4.6
AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein. 31 4.6
AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein. 31 4.6
AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein. 31 4.6
BC094778-1|AAH94778.1| 468|Homo sapiens midnolin protein. 31 6.1
AK098809-1|BAC05419.1| 320|Homo sapiens protein ( Homo sapiens ... 30 8.1
>X69907-1|CAA49532.1| 136|Homo sapiens P1 gene for c subunit of
human mitochondrial ATP protein.
Length = 136
Score = 86.6 bits (205), Expect = 9e-17
Identities = 52/104 (50%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Frame = +1
Query: 229 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAVRSFQTTSVTKDIDSAAKFXXXXXX 387
C L+RP++A P ++ P+ P Q+ A R FQT+ V++DID+AAKF
Sbjct: 17 CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGAA 75
Query: 388 XXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 519
FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 76 TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 119
>D13118-1|BAA02420.1| 136|Homo sapiens ATP synthase subunit c
precursor protein.
Length = 136
Score = 86.6 bits (205), Expect = 9e-17
Identities = 52/104 (50%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Frame = +1
Query: 229 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAVRSFQTTSVTKDIDSAAKFXXXXXX 387
C L+RP++A P ++ P+ P Q+ A R FQT+ V++DID+AAKF
Sbjct: 17 CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGAA 75
Query: 388 XXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 519
FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 76 TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 119
>CR533449-1|CAG38480.1| 136|Homo sapiens ATP5G1 protein.
Length = 136
Score = 86.6 bits (205), Expect = 9e-17
Identities = 52/104 (50%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Frame = +1
Query: 229 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAVRSFQTTSVTKDIDSAAKFXXXXXX 387
C L+RP++A P ++ P+ P Q+ A R FQT+ V++DID+AAKF
Sbjct: 17 CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGAA 75
Query: 388 XXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 519
FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 76 TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 119
>BT007230-1|AAP35894.1| 136|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit c
(subunit 9), protein.
Length = 136
Score = 86.6 bits (205), Expect = 9e-17
Identities = 52/104 (50%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Frame = +1
Query: 229 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAVRSFQTTSVTKDIDSAAKFXXXXXX 387
C L+RP++A P ++ P+ P Q+ A R FQT+ V++DID+AAKF
Sbjct: 17 CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGAA 75
Query: 388 XXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 519
FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 76 TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 119
>BC004963-1|AAH04963.1| 136|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit C1
(subunit 9) protein.
Length = 136
Score = 86.6 bits (205), Expect = 9e-17
Identities = 52/104 (50%), Positives = 63/104 (60%), Gaps = 7/104 (6%)
Frame = +1
Query: 229 CNSALVRPLAAV----PTHTQMVPAV---PTQLSAVRSFQTTSVTKDIDSAAKFXXXXXX 387
C L+RP++A P ++ P+ P Q+ A R FQT+ V++DID+AAKF
Sbjct: 17 CTRGLIRPVSASFLNSPVNSSKQPSYSNFPLQV-ARREFQTSVVSRDIDTAAKFIGAGAA 75
Query: 388 XXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFSYAILGFALSE 519
FGSLIIGYARNPSLKQQLFSYAILGFALSE
Sbjct: 76 TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSE 119
>X69908-1|CAA49533.1| 141|Homo sapiens protein ( H.sapiens gene for
mitochondrial ATP synthase c subunit (P2 form). ).
Length = 141
Score = 85.8 bits (203), Expect = 2e-16
Identities = 44/74 (59%), Positives = 51/74 (68%)
Frame = +1
Query: 298 TQLSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQ 477
T L + RSFQT+++++DID+AAKF FGSLIIGYARNPSLKQ
Sbjct: 51 TSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQ 110
Query: 478 QLFSYAILGFALSE 519
QLFSYAILGFALSE
Sbjct: 111 QLFSYAILGFALSE 124
>D13119-1|BAA02421.1| 141|Homo sapiens ATP synthase subunit c
precursor protein.
Length = 141
Score = 85.8 bits (203), Expect = 2e-16
Identities = 44/74 (59%), Positives = 51/74 (68%)
Frame = +1
Query: 298 TQLSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQ 477
T L + RSFQT+++++DID+AAKF FGSLIIGYARNPSLKQ
Sbjct: 51 TSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQ 110
Query: 478 QLFSYAILGFALSE 519
QLFSYAILGFALSE
Sbjct: 111 QLFSYAILGFALSE 124
>BC020826-1|AAH20826.1| 141|Homo sapiens ATP5G2 protein protein.
Length = 141
Score = 85.8 bits (203), Expect = 2e-16
Identities = 44/74 (59%), Positives = 51/74 (68%)
Frame = +1
Query: 298 TQLSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQ 477
T L + RSFQT+++++DID+AAKF FGSLIIGYARNPSLKQ
Sbjct: 51 TSLVSSRSFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQ 110
Query: 478 QLFSYAILGFALSE 519
QLFSYAILGFALSE
Sbjct: 111 QLFSYAILGFALSE 124
>U09813-1|AAA78807.1| 142|Homo sapiens mitochondrial ATP synthase
subunit 9 precursor protein.
Length = 142
Score = 81.8 bits (193), Expect = 2e-15
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = +1
Query: 316 RSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFSYA 495
R FQT+++++DID+AAKF FGSLIIGYARNPSLKQQLFSYA
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYA 117
Query: 496 ILGFALSE 519
ILGFALSE
Sbjct: 118 ILGFALSE 125
>M16453-1|AAA51806.1| 100|Homo sapiens ATP5A protein.
Length = 100
Score = 81.8 bits (193), Expect = 2e-15
Identities = 45/75 (60%), Positives = 50/75 (66%)
Frame = +1
Query: 295 PTQLSAVRSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLK 474
P Q+ A R FQT+ V++DID+AAKF FGSLIIGYARNPSLK
Sbjct: 10 PLQV-ARRGFQTSVVSRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLK 68
Query: 475 QQLFSYAILGFALSE 519
QQLFSYAILGFALSE
Sbjct: 69 QQLFSYAILGFALSE 83
>CR407601-1|CAG28411.1| 142|Homo sapiens ATP5G3 protein.
Length = 142
Score = 81.8 bits (193), Expect = 2e-15
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = +1
Query: 316 RSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFSYA 495
R FQT+++++DID+AAKF FGSLIIGYARNPSLKQQLFSYA
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYA 117
Query: 496 ILGFALSE 519
ILGFALSE
Sbjct: 118 ILGFALSE 125
>BC106881-1|AAI06882.1| 142|Homo sapiens ATP synthase, H+
transporting, mitochondrial F0 complex, subunit C3
(subunit 9) protein.
Length = 142
Score = 81.8 bits (193), Expect = 2e-15
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = +1
Query: 316 RSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFSYA 495
R FQT+++++DID+AAKF FGSLIIGYARNPSLKQQLFSYA
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYA 117
Query: 496 ILGFALSE 519
ILGFALSE
Sbjct: 118 ILGFALSE 125
>AC096649-1|AAX88970.1| 142|Homo sapiens unknown protein.
Length = 142
Score = 81.8 bits (193), Expect = 2e-15
Identities = 41/68 (60%), Positives = 47/68 (69%)
Frame = +1
Query: 316 RSFQTTSVTKDIDSAAKFXXXXXXXXXXXXXXXXXXXXFGSLIIGYARNPSLKQQLFSYA 495
R FQT+++++DID+AAKF FGSLIIGYARNPSLKQQLFSYA
Sbjct: 58 REFQTSAISRDIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYA 117
Query: 496 ILGFALSE 519
ILGFALSE
Sbjct: 118 ILGFALSE 125
>M16439-1|AAA51804.1| 58|Homo sapiens ATP5A protein.
Length = 58
Score = 62.5 bits (145), Expect = 2e-09
Identities = 29/30 (96%), Positives = 30/30 (100%)
Frame = +1
Query: 430 FGSLIIGYARNPSLKQQLFSYAILGFALSE 519
FGSLIIGYARNPSLKQQLFSYAI+GFALSE
Sbjct: 12 FGSLIIGYARNPSLKQQLFSYAIVGFALSE 41
>AF522196-1|AAN45861.1| 870|Homo sapiens scavenger receptor type F
protein.
Length = 870
Score = 34.7 bits (76), Expect = 0.38
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Frame = -1
Query: 471 EGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRD 292
+G GIA EG CS CRC FG+ + R GP C+ELC
Sbjct: 71 QGDECGIAVCEGNSTCSENEVCVRPGECRCRH-GYFGANCDTKCPR-QFWGPDCKELCSC 128
Query: 291 SRYHLC--MGGYC-C---KWSHQCRVAEDGRPGCRGDQSG 190
+ C + G C C +W +C A + G +SG
Sbjct: 129 HPHGQCEDVTGQCTCHARRWGARCEHACQCQHGTCHPRSG 168
>AB052951-1|BAC53753.1| 866|Homo sapiens SRECRP-1 protein.
Length = 866
Score = 34.7 bits (76), Expect = 0.38
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Frame = -1
Query: 471 EGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRD 292
+G GIA EG CS CRC FG+ + R GP C+ELC
Sbjct: 71 QGDECGIAVCEGNSTCSENEVCVRPGECRCRH-GYFGANCDTKCPR-QFWGPDCKELCSC 128
Query: 291 SRYHLC--MGGYC-C---KWSHQCRVAEDGRPGCRGDQSG 190
+ C + G C C +W +C A + G +SG
Sbjct: 129 HPHGQCEDVTGQCTCHARRWGARCEHACQCQHGTCHPRSG 168
>AB024433-1|BAD93345.1| 866|Homo sapiens NSR1 protein.
Length = 866
Score = 34.7 bits (76), Expect = 0.38
Identities = 30/100 (30%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
Frame = -1
Query: 471 EGGVPGIADDEGAEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRD 292
+G GIA EG CS CRC FG+ + R GP C+ELC
Sbjct: 71 QGDECGIAVCEGNSTCSENEVCVRPGECRCRH-GYFGANCDTKCPR-QFWGPDCKELCSC 128
Query: 291 SRYHLC--MGGYC-C---KWSHQCRVAEDGRPGCRGDQSG 190
+ C + G C C +W +C A + G +SG
Sbjct: 129 HPHGQCEDVTGQCTCHARRWGARCEHACQCQHGTCHPRSG 168
>AY714129-1|AAU94938.1| 4186|Homo sapiens anchor protein protein.
Length = 4186
Score = 33.9 bits (74), Expect = 0.66
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -1
Query: 459 PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEG 319
PG+A+ G A DC S++ CRC+ T FG ++ S R LEG
Sbjct: 2556 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFGVLMDA-SPRERLEG 2604
>AF231023-1|AAF61929.1| 3312|Homo sapiens protocadherin Flamingo 1
protein.
Length = 3312
Score = 33.9 bits (74), Expect = 0.66
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -1
Query: 459 PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEG 319
PG+A+ G A DC S++ CRC+ T FG ++ S R LEG
Sbjct: 2486 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFGVLMDA-SPRERLEG 2534
>AB011536-1|BAA32464.1| 1364|Homo sapiens MEGF2 protein.
Length = 1364
Score = 33.9 bits (74), Expect = 0.66
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Frame = -1
Query: 459 PGIADDEG---AEDCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEG 319
PG+A+ G A DC S++ CRC+ T FG ++ S R LEG
Sbjct: 538 PGLAEQHGVWTARDCELVHRNGSHARCRCSRTGTFGVLMDA-SPRERLEG 586
>AL356104-4|CAH72941.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 3/94 (3%)
Frame = -1
Query: 462 VPGIADDEGAEDCSNTSSGTS-YSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSR 286
+PG A E C + G HC C + + G GPHC LC
Sbjct: 383 LPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGVCQATSGLCQCAPGYTGPHCASLCPPDT 442
Query: 285 YHL-CMGGYCCKWSHQCRVAEDGRPGCR-GDQSG 190
Y + C C+ + C DG C+ G Q G
Sbjct: 443 YGVNCSARCSCENAIACSPI-DGECVCKEGWQRG 475
Score = 31.9 bits (69), Expect = 2.6
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = -1
Query: 462 VPGIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSR 286
VPG D+ + +C+ G C C + + + V S GL+ P+C + C
Sbjct: 123 VPGWRGDDCSSECAPGMWGPQCDKPCSCGNNSSCDPKSGVCSCPSGLQPPNCLQPCTPGY 182
Query: 285 YHLCMGGYCCKWSHQCRVA 229
Y G C++ QC A
Sbjct: 183 Y-----GPACQFRCQCHGA 196
Score = 30.3 bits (65), Expect = 8.1
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 330 GLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDGRPGCRGDQ 196
G GP+C + CR GG C +++ QCR A PG GD+
Sbjct: 266 GFHGPNCSQECRCHN-----GGLCDRFTGQCRCA----PGYTGDR 301
>AL158169-5|CAH70011.1| 1037|Homo sapiens novel protein similar to
mouse Jedi soluble isoform 736 protein protein.
Length = 1037
Score = 32.3 bits (70), Expect = 2.0
Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 3/94 (3%)
Frame = -1
Query: 462 VPGIADDEGAEDCSNTSSGTS-YSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSR 286
+PG A E C + G HC C + + G GPHC LC
Sbjct: 383 LPGWAGLHCNESCPQDTHGPGCQEHCLCLHGGVCQATSGLCQCAPGYTGPHCASLCPPDT 442
Query: 285 YHL-CMGGYCCKWSHQCRVAEDGRPGCR-GDQSG 190
Y + C C+ + C DG C+ G Q G
Sbjct: 443 YGVNCSARCSCENAIACSPI-DGECVCKEGWQRG 475
Score = 31.9 bits (69), Expect = 2.6
Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = -1
Query: 462 VPGIADDEGAEDCSNTSSGTSYSH-CRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSR 286
VPG D+ + +C+ G C C + + + V S GL+ P+C + C
Sbjct: 123 VPGWRGDDCSSECAPGMWGPQCDKPCSCGNNSSCDPKSGVCSCPSGLQPPNCLQPCTPGY 182
Query: 285 YHLCMGGYCCKWSHQCRVA 229
Y G C++ QC A
Sbjct: 183 Y-----GPACQFRCQCHGA 196
Score = 30.3 bits (65), Expect = 8.1
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 330 GLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDGRPGCRGDQ 196
G GP+C + CR GG C +++ QCR A PG GD+
Sbjct: 266 GFHGPNCSQECRCHN-----GGLCDRFTGQCRCA----PGYTGDR 301
>BC132727-1|AAI32728.1| 1214|Homo sapiens transient receptor
potential cation channel, subfamily M, member 4 protein.
Length = 1214
Score = 31.1 bits (67), Expect = 4.6
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -1
Query: 228 EDGRPGCRGDQSGGRQHFVFIRCGARQTHF----TTVYVGFNTLFVTMASNFGTFSRLAL 61
+ GRPGC G + GGR RC R HF T+++G ++ FSR+ L
Sbjct: 752 QSGRPGCCGGRCGGR------RCLRRWFHFWGAPVTIFMGNVVSYLLFLL---LFSRVLL 802
Query: 60 AQF*PHLPKNTE 25
F P P + E
Sbjct: 803 VDFQPAPPGSLE 814
>AY297045-1|AAP44474.1| 1214|Homo sapiens transient receptor
potential cation channel subfamily M member 4 splice
variant protein.
Length = 1214
Score = 31.1 bits (67), Expect = 4.6
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -1
Query: 228 EDGRPGCRGDQSGGRQHFVFIRCGARQTHF----TTVYVGFNTLFVTMASNFGTFSRLAL 61
+ GRPGC G + GGR RC R HF T+++G ++ FSR+ L
Sbjct: 752 QSGRPGCCGGRCGGR------RCLRRWFHFWGAPVTIFMGNVVSYLLFLL---LFSRVLL 802
Query: 60 AQF*PHLPKNTE 25
F P P + E
Sbjct: 803 VDFQPAPPGSLE 814
>AY297044-1|AAP44473.1| 1040|Homo sapiens transient receptor
potential cation channel subfamily M member 4 splice
variant protein.
Length = 1040
Score = 31.1 bits (67), Expect = 4.6
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -1
Query: 228 EDGRPGCRGDQSGGRQHFVFIRCGARQTHF----TTVYVGFNTLFVTMASNFGTFSRLAL 61
+ GRPGC G + GGR RC R HF T+++G ++ FSR+ L
Sbjct: 578 QSGRPGCCGGRCGGR------RCLRRWFHFWGAPVTIFMGNVVSYLLFLL---LFSRVLL 628
Query: 60 AQF*PHLPKNTE 25
F P P + E
Sbjct: 629 VDFQPAPPGSLE 640
>AY165865-1|AAO18147.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 3 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 4.6
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -1
Query: 429 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 250
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 249 SHQCRVAEDGRPGCRGDQSGGRQH 178
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AY165864-1|AAO18146.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 2 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 4.6
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -1
Query: 429 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 250
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 249 SHQCRVAEDGRPGCRGDQSGGRQH 178
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AY165863-1|AAO18145.1| 2809|Homo sapiens fibrillin-3 short form
precursor transcript variant 1 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 4.6
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -1
Query: 429 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 250
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 249 SHQCRVAEDGRPGCRGDQSGGRQH 178
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AY046396-1|AAL02142.1| 1040|Homo sapiens TRP-related cation influx
channel protein.
Length = 1040
Score = 31.1 bits (67), Expect = 4.6
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -1
Query: 228 EDGRPGCRGDQSGGRQHFVFIRCGARQTHF----TTVYVGFNTLFVTMASNFGTFSRLAL 61
+ GRPGC G + GGR RC R HF T+++G ++ FSR+ L
Sbjct: 578 QSGRPGCCGGRCGGR------RCLRRWFHFWGAPVTIFMGNVVSYLLFLL---LFSRVLL 628
Query: 60 AQF*PHLPKNTE 25
F P P + E
Sbjct: 629 VDFQPAPPGSLE 640
>AK131282-1|BAD18457.1| 872|Homo sapiens protein ( Homo sapiens
cDNA FLJ16233 fis, clone FEBRA2028256, moderately
similar to FIBRILLIN 2 PRECURSOR. ).
Length = 872
Score = 31.1 bits (67), Expect = 4.6
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -1
Query: 429 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 250
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 484 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 537
Query: 249 SHQCRVAEDGRPGCRGDQSGGRQH 178
+ EDGR D+ RQH
Sbjct: 538 PRGYLLEEDGRTCKDLDECTSRQH 561
>AK000048-1|BAA90907.1| 1016|Homo sapiens protein ( Homo sapiens
cDNA FLJ20041 fis, clone COL00423. ).
Length = 1016
Score = 31.1 bits (67), Expect = 4.6
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -1
Query: 228 EDGRPGCRGDQSGGRQHFVFIRCGARQTHF----TTVYVGFNTLFVTMASNFGTFSRLAL 61
+ GRPGC G + GGR RC R HF T+++G ++ FSR+ L
Sbjct: 578 QSGRPGCCGGRCGGR------RCLRRWFHFWGAPVTIFMGNVVSYLLFLL---LFSRVLL 628
Query: 60 AQF*PHLPKNTE 25
F P P + E
Sbjct: 629 VDFQPAPPGSLE 640
>AJ575813-1|CAE05941.1| 1214|Homo sapiens transient receptor
potential ion channel melastatin subgroup member 4
protein protein.
Length = 1214
Score = 31.1 bits (67), Expect = 4.6
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -1
Query: 228 EDGRPGCRGDQSGGRQHFVFIRCGARQTHF----TTVYVGFNTLFVTMASNFGTFSRLAL 61
+ GRPGC G + GGR RC R HF T+++G ++ FSR+ L
Sbjct: 752 QSGRPGCCGGRCGGR------RCLRRWFHFWGAPVTIFMGNVVSYLLFLL---LFSRVLL 802
Query: 60 AQF*PHLPKNTE 25
F P P + E
Sbjct: 803 VDFQPAPPGSLE 814
>AF497623-1|AAM18083.1| 1214|Homo sapiens cation channel TRPM4B
protein.
Length = 1214
Score = 31.1 bits (67), Expect = 4.6
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 4/72 (5%)
Frame = -1
Query: 228 EDGRPGCRGDQSGGRQHFVFIRCGARQTHF----TTVYVGFNTLFVTMASNFGTFSRLAL 61
+ GRPGC G + GGR RC R HF T+++G ++ FSR+ L
Sbjct: 752 QSGRPGCCGGRCGGR------RCLRRWFHFWGAPVTIFMGNVVSYLLFLL---LFSRVLL 802
Query: 60 AQF*PHLPKNTE 25
F P P + E
Sbjct: 803 VDFQPAPPGSLE 814
>AB177800-1|BAD16736.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 4.6
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -1
Query: 429 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 250
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 249 SHQCRVAEDGRPGCRGDQSGGRQH 178
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AB177799-1|BAD16735.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 4.6
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -1
Query: 429 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 250
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 249 SHQCRVAEDGRPGCRGDQSGGRQH 178
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AB177798-1|BAD16734.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 4.6
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -1
Query: 429 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 250
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 249 SHQCRVAEDGRPGCRGDQSGGRQH 178
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AB177797-1|BAD16733.1| 2809|Homo sapiens fibrillin 3 protein.
Length = 2809
Score = 31.1 bits (67), Expect = 4.6
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -1
Query: 429 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 250
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2378 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2431
Query: 249 SHQCRVAEDGRPGCRGDQSGGRQH 178
+ EDGR D+ RQH
Sbjct: 2432 PRGYLLEEDGRTCKDLDECTSRQH 2455
>AB053450-1|BAB47408.2| 2816|Homo sapiens fibrillin3 protein.
Length = 2816
Score = 31.1 bits (67), Expect = 4.6
Identities = 22/84 (26%), Positives = 35/84 (41%)
Frame = -1
Query: 429 DCSNTSSGTSYSHCRCTSTNEFGSRVNVLSDRCGLEGPHCRELCRDSRYHLCMGGYCCKW 250
+C N S G+ HC+ T + + + D C C LC++++ G + C
Sbjct: 2385 ECIN-SLGSFRCHCQAGYTPDATATTCLDMDECSQVPKPCTFLCKNTK-----GSFLCSC 2438
Query: 249 SHQCRVAEDGRPGCRGDQSGGRQH 178
+ EDGR D+ RQH
Sbjct: 2439 PRGYLLEEDGRTCKDLDECTSRQH 2462
>BC094778-1|AAH94778.1| 468|Homo sapiens midnolin protein.
Length = 468
Score = 30.7 bits (66), Expect = 6.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = +2
Query: 293 SLHSSLQCGPSRPHRSLRTLTLLPNSLVLVQRQWE*LVPELVLEQSSAPSSSAMP 457
+LH + Q RP R + T+ + N L+ R ++ + P L + A S A P
Sbjct: 287 TLHPNCQDSSGRPRRDIGTILQILNDLLSATRHYQGMPPSLAQLRCHAQCSPASP 341
>AK098809-1|BAC05419.1| 320|Homo sapiens protein ( Homo sapiens
cDNA FLJ25943 fis, clone JTH10559. ).
Length = 320
Score = 30.3 bits (65), Expect = 8.1
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = -1
Query: 330 GLEGPHCRELCRDSRYHLCMGGYCCKWSHQCRVAEDGRPGCRGDQ 196
G GP+C + CR GG C +++ QCR A PG GD+
Sbjct: 67 GFHGPNCSQECRCHN-----GGLCDRFTGQCRCA----PGYTGDR 102
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,540,038
Number of Sequences: 237096
Number of extensions: 2788426
Number of successful extensions: 7729
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 7045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7709
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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